RNA–Protein interactions for RNA: ENST00000532823.5

ARHGEF12-212, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 5

Gene ARHGEF12, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-212ENST00000532823 AEBP2Q6ZN18 517 aaPredicted RBP21.61■■□□□ 1.05
ARHGEF12-212ENST00000532823 CHIC1Q5VXU3 224 aa20.59■□□□□ 0.89
ARHGEF12-212ENST00000532823 SENP3Q9H4L4 574 aaPredicted RBP18.61■□□□□ 0.57
ARHGEF12-212ENST00000532823 PHF23Q9BUL5 403 aaPredicted RBP18.29■□□□□ 0.52
ARHGEF12-212ENST00000532823 FOXD1Q16676 465 aa17.23■□□□□ 0.35
ARHGEF12-212ENST00000532823 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.24
ARHGEF12-212ENST00000532823 MSH5O43196 834 aa16.28■□□□□ 0.2
ARHGEF12-212ENST00000532823 PIAS4Q8N2W9 510 aaPredicted RBP16.17■□□□□ 0.18
ARHGEF12-212ENST00000532823 POTEDQ86YR6 584 aa16.09■□□□□ 0.17
ARHGEF12-212ENST00000532823 PPP6R1Q9UPN7 881 aa16.03■□□□□ 0.16
ARHGEF12-212ENST00000532823 ADRA2BP18089 450 aa16.01■□□□□ 0.15
ARHGEF12-212ENST00000532823 SCAF1Q9H7N4 1312 aaKnown RBP14.86□□□□□ -0.03
ARHGEF12-212ENST00000532823 DMRT2Q9Y5R5 561 aa14.71□□□□□ -0.05
ARHGEF12-212ENST00000532823 MAPK8IP2Q13387 824 aaPredicted RBP14.69□□□□□ -0.06
ARHGEF12-212ENST00000532823 PPP4R3CPQ6ZMV5 832 aa14.41□□□□□ -0.1
ARHGEF12-212ENST00000532823 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
ARHGEF12-212ENST00000532823 HOXD11P31277 338 aaPredicted RBP14.15□□□□□ -0.14
ARHGEF12-212ENST00000532823 DCAF8L1A6NGE4 600 aa14.14□□□□□ -0.15
ARHGEF12-212ENST00000532823 RNF216Q9NWF9 866 aaPredicted RBP14.07□□□□□ -0.16
ARHGEF12-212ENST00000532823 NCBP3Q53F19 620 aaKnown RBP13.97□□□□□ -0.17
ARHGEF12-212ENST00000532823 CACNB1Q02641 598 aaPredicted RBP13.94□□□□□ -0.18
ARHGEF12-212ENST00000532823 RNF39Q9H2S5 420 aa13.81□□□□□ -0.2
ARHGEF12-212ENST00000532823 DNAJC5BQ9UF47 199 aa13.76□□□□□ -0.21
ARHGEF12-212ENST00000532823 C1QBPQ07021 282 aaKnown RBP13.68□□□□□ -0.22
ARHGEF12-212ENST00000532823 NPM3O75607 178 aaKnown RBP13.63□□□□□ -0.23
ARHGEF12-212ENST00000532823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.54□□□□□ -0.242e-8■■■□□ 14.8
ARHGEF12-212ENST00000532823 KCNA4P22459 653 aa13.31□□□□□ -0.28
ARHGEF12-212ENST00000532823 U3KPZ7 1027 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF12-212ENST00000532823 CAPN15O75808 1086 aa13.03□□□□□ -0.32
ARHGEF12-212ENST00000532823 APLP2Q06481 763 aa13.02□□□□□ -0.33
ARHGEF12-212ENST00000532823 SLC4A2P04920 1241 aa12.98□□□□□ -0.33
ARHGEF12-212ENST00000532823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF12-212ENST00000532823 HNRNPUL2Q1KMD3 747 aaKnown RBP12.97□□□□□ -0.33
ARHGEF12-212ENST00000532823 SPINK5Q9NQ38 1064 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF12-212ENST00000532823 DSG3P32926 999 aa12.91□□□□□ -0.34
ARHGEF12-212ENST00000532823 SAMD1Q6SPF0 538 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF12-212ENST00000532823 ZNF219Q9P2Y4 722 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF12-212ENST00000532823 TRHP20396 242 aaPredicted RBP12.79□□□□□ -0.36
ARHGEF12-212ENST00000532823 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF12-212ENST00000532823 ABCB7O75027 752 aa12.65□□□□□ -0.38
ARHGEF12-212ENST00000532823 SLC4A1APQ9BWU0 796 aaKnown RBP12.64□□□□□ -0.39
ARHGEF12-212ENST00000532823 FOXD4L1Q9NU39 408 aa12.52□□□□□ -0.41
ARHGEF12-212ENST00000532823 POTEHQ6S545 545 aa12.48□□□□□ -0.41
ARHGEF12-212ENST00000532823 RBM42Q9BTD8 480 aaKnown RBP12.45□□□□□ -0.42
ARHGEF12-212ENST00000532823 POLA2Q14181 598 aa12.44□□□□□ -0.42
ARHGEF12-212ENST00000532823 ZBTB12Q9Y330 459 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF12-212ENST00000532823 ATF5Q9Y2D1 282 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF12-212ENST00000532823 ATXN8OSP0DMR3 200 aa12.19□□□□□ -0.46
ARHGEF12-212ENST00000532823 ZBTB22O15209 634 aa12.18□□□□□ -0.46
ARHGEF12-212ENST00000532823 CHRDL2Q6WN34 429 aa12.1□□□□□ -0.47
ARHGEF12-212ENST00000532823 AKT1S1Q96B36 256 aa12.1□□□□□ -0.47
ARHGEF12-212ENST00000532823 OSCARQ8IYS5 282 aa12.03□□□□□ -0.48
ARHGEF12-212ENST00000532823 FBLN2P98095 1184 aa11.97□□□□□ -0.49
ARHGEF12-212ENST00000532823 REM2Q8IYK8 340 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF12-212ENST00000532823 SPDYE2BA6NHP3 402 aa11.86□□□□□ -0.51
ARHGEF12-212ENST00000532823 SPDYE6P0CI01 402 aa11.86□□□□□ -0.51
ARHGEF12-212ENST00000532823 SPDYE2Q495Y8 402 aa11.86□□□□□ -0.51
ARHGEF12-212ENST00000532823 PITPNM1O00562 1244 aa11.79□□□□□ -0.52
ARHGEF12-212ENST00000532823 PIP4P2Q8N4L2 257 aa11.77□□□□□ -0.53
ARHGEF12-212ENST00000532823 FXR2P51116 673 aaKnown RBP eCLIP11.71□□□□□ -0.536e-8■■■□□ 16.3
ARHGEF12-212ENST00000532823 ZNF692Q9BU19 519 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF12-212ENST00000532823 MKRN4PQ13434 485 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF12-212ENST00000532823 SPDYE1Q8NFV5 336 aaPredicted RBP11.68□□□□□ -0.54
ARHGEF12-212ENST00000532823 SP7Q8TDD2 431 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF12-212ENST00000532823 CSRNP3Q8WYN3 585 aa11.64□□□□□ -0.55
ARHGEF12-212ENST00000532823 SSUH2Q9Y2M2 353 aa11.64□□□□□ -0.55
ARHGEF12-212ENST00000532823 HAX1O00165 279 aa11.62□□□□□ -0.55
ARHGEF12-212ENST00000532823 CLEC11AQ9Y240 323 aa11.61□□□□□ -0.55
ARHGEF12-212ENST00000532823 PRKAR2AP13861 404 aaKnown RBP11.52□□□□□ -0.57
ARHGEF12-212ENST00000532823 EHMT2Q96KQ7 1210 aa11.51□□□□□ -0.57
ARHGEF12-212ENST00000532823 PABPN1Q86U42 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
ARHGEF12-212ENST00000532823 PRR29P0C7W0 189 aa11.45□□□□□ -0.58
ARHGEF12-212ENST00000532823 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
ARHGEF12-212ENST00000532823 EVX2Q03828 476 aa11.32□□□□□ -0.6
ARHGEF12-212ENST00000532823 CHADLQ6NUI6 762 aa11.31□□□□□ -0.6
ARHGEF12-212ENST00000532823 STAG3Q9UJ98 1225 aa11.28□□□□□ -0.6
ARHGEF12-212ENST00000532823 SPDYE4A6NLX3 237 aa11.24□□□□□ -0.61
ARHGEF12-212ENST00000532823 FARP1Q9Y4F1 1045 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF12-212ENST00000532823 GABBR2O75899 941 aa11.17□□□□□ -0.62
ARHGEF12-212ENST00000532823 CD44P16070 742 aaKnown RBP11.16□□□□□ -0.62
ARHGEF12-212ENST00000532823 CLCN6P51797 869 aa11.15□□□□□ -0.62
ARHGEF12-212ENST00000532823 CREBZFQ9NS37 354 aa11.07□□□□□ -0.64
ARHGEF12-212ENST00000532823 PAK3O75914 559 aaPredicted RBP11.01□□□□□ -0.65
ARHGEF12-212ENST00000532823 NPM1P06748 294 aaKnown RBP eCLIP11.01□□□□□ -0.65
ARHGEF12-212ENST00000532823 ZRANB1Q9UGI0 708 aa11□□□□□ -0.65
ARHGEF12-212ENST00000532823 ZNF579Q8NAF0 562 aaKnown RBP10.99□□□□□ -0.65
ARHGEF12-212ENST00000532823 DCBLD2Q96PD2 775 aa10.94□□□□□ -0.66
ARHGEF12-212ENST00000532823 LHX8Q68G74 356 aa10.93□□□□□ -0.66
ARHGEF12-212ENST00000532823 PROM2Q8N271 834 aa10.91□□□□□ -0.66
ARHGEF12-212ENST00000532823 PLEKHG5O94827 1062 aa10.87□□□□□ -0.67
ARHGEF12-212ENST00000532823 POTEIP0CG38 1075 aa10.85□□□□□ -0.67
ARHGEF12-212ENST00000532823 MNX1P50219 401 aaPredicted RBP10.85□□□□□ -0.67
ARHGEF12-212ENST00000532823 GALR2O43603 387 aaPredicted RBP10.79□□□□□ -0.68
ARHGEF12-212ENST00000532823 PHF12Q96QT6 1004 aa10.79□□□□□ -0.68
ARHGEF12-212ENST00000532823 MIER1Q8N108 512 aa10.75□□□□□ -0.69
ARHGEF12-212ENST00000532823 TSPYL2Q9H2G4 693 aaPredicted RBP10.7□□□□□ -0.7
ARHGEF12-212ENST00000532823 ZBTB47Q9UFB7 747 aaPredicted RBP10.69□□□□□ -0.7
ARHGEF12-212ENST00000532823 PLCD3Q8N3E9 789 aa10.68□□□□□ -0.7
ARHGEF12-212ENST00000532823 MS4A3Q96HJ5 214 aa10.65□□□□□ -0.7
ARHGEF12-212ENST00000532823 PLSCR2Q9NRY7 297 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms