RNA–Protein interactions for RNA: ENST00000532419.5

TCN1-203, Transcript of transcobalamin 1, humanhuman

TSL 5

Gene TCN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-203ENST00000532419 AEBP2Q6ZN18 517 aaPredicted RBP24.22■■□□□ 1.47
TCN1-203ENST00000532419 CHIC1Q5VXU3 224 aa22.77■■□□□ 1.24
TCN1-203ENST00000532419 SENP3Q9H4L4 574 aaPredicted RBP20.73■□□□□ 0.91
TCN1-203ENST00000532419 PHF23Q9BUL5 403 aaPredicted RBP20.43■□□□□ 0.86
TCN1-203ENST00000532419 FOXD1Q16676 465 aa19.34■□□□□ 0.69
TCN1-203ENST00000532419 POTEDQ86YR6 584 aa18.41■□□□□ 0.54
TCN1-203ENST00000532419 MSH5O43196 834 aa18.21■□□□□ 0.51
TCN1-203ENST00000532419 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
TCN1-203ENST00000532419 PIAS4Q8N2W9 510 aaPredicted RBP18.04■□□□□ 0.48
TCN1-203ENST00000532419 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.45
TCN1-203ENST00000532419 ADRA2BP18089 450 aa17.83■□□□□ 0.44
TCN1-203ENST00000532419 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
TCN1-203ENST00000532419 DMRT2Q9Y5R5 561 aa16.39■□□□□ 0.21
TCN1-203ENST00000532419 SCAF1Q9H7N4 1312 aaKnown RBP16.35■□□□□ 0.21
TCN1-203ENST00000532419 PPP4R3CPQ6ZMV5 832 aa15.84■□□□□ 0.13
TCN1-203ENST00000532419 CACNB1Q02641 598 aaPredicted RBP15.81■□□□□ 0.12
TCN1-203ENST00000532419 DCAF8L1A6NGE4 600 aa15.8■□□□□ 0.12
TCN1-203ENST00000532419 HOXD11P31277 338 aaPredicted RBP15.68■□□□□ 0.1
TCN1-203ENST00000532419 CNKSR2Q8WXI2 1034 aa15.6■□□□□ 0.09
TCN1-203ENST00000532419 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
TCN1-203ENST00000532419 RNF39Q9H2S5 420 aa15.49■□□□□ 0.07
TCN1-203ENST00000532419 C1QBPQ07021 282 aaKnown RBP15.27■□□□□ 0.04
TCN1-203ENST00000532419 NCBP3Q53F19 620 aaKnown RBP15.18■□□□□ 0.02
TCN1-203ENST00000532419 DNAJC5BQ9UF47 199 aa15.17■□□□□ 0.02
TCN1-203ENST00000532419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.01
TCN1-203ENST00000532419 NPM3O75607 178 aaKnown RBP14.92□□□□□ -0.02
TCN1-203ENST00000532419 U3KPZ7 1027 aaPredicted RBP14.61□□□□□ -0.07
TCN1-203ENST00000532419 CAPN15O75808 1086 aa14.5□□□□□ -0.09
TCN1-203ENST00000532419 SPINK5Q9NQ38 1064 aaPredicted RBP14.48□□□□□ -0.09
TCN1-203ENST00000532419 DSG3P32926 999 aa14.43□□□□□ -0.1
TCN1-203ENST00000532419 KCNA4P22459 653 aa14.42□□□□□ -0.1
TCN1-203ENST00000532419 SLC4A2P04920 1241 aa14.3□□□□□ -0.12
TCN1-203ENST00000532419 TRHP20396 242 aaPredicted RBP14.22□□□□□ -0.13
TCN1-203ENST00000532419 APLP2Q06481 763 aa14.21□□□□□ -0.13
TCN1-203ENST00000532419 POTEHQ6S545 545 aa14.21□□□□□ -0.13
TCN1-203ENST00000532419 ZNF219Q9P2Y4 722 aaPredicted RBP14.15□□□□□ -0.14
TCN1-203ENST00000532419 ABCB7O75027 752 aa14.14□□□□□ -0.15
TCN1-203ENST00000532419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.13□□□□□ -0.15
TCN1-203ENST00000532419 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
TCN1-203ENST00000532419 SAMD1Q6SPF0 538 aaPredicted RBP14.04□□□□□ -0.16
TCN1-203ENST00000532419 MYCNP04198 464 aaPredicted RBP13.82□□□□□ -0.2
TCN1-203ENST00000532419 RBM42Q9BTD8 480 aaKnown RBP13.81□□□□□ -0.2
TCN1-203ENST00000532419 POLA2Q14181 598 aa13.76□□□□□ -0.21
TCN1-203ENST00000532419 CHRDL2Q6WN34 429 aa13.59□□□□□ -0.23
TCN1-203ENST00000532419 SLC4A1APQ9BWU0 796 aaKnown RBP13.58□□□□□ -0.24
TCN1-203ENST00000532419 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
TCN1-203ENST00000532419 ATF5Q9Y2D1 282 aaPredicted RBP13.5□□□□□ -0.25
TCN1-203ENST00000532419 ZBTB12Q9Y330 459 aaPredicted RBP13.46□□□□□ -0.25
TCN1-203ENST00000532419 AKT1S1Q96B36 256 aa13.43□□□□□ -0.26
TCN1-203ENST00000532419 OSCARQ8IYS5 282 aa13.32□□□□□ -0.28
TCN1-203ENST00000532419 REM2Q8IYK8 340 aaPredicted RBP13.3□□□□□ -0.28
TCN1-203ENST00000532419 ZBTB22O15209 634 aa13.23□□□□□ -0.29
TCN1-203ENST00000532419 PIP4P2Q8N4L2 257 aa13.22□□□□□ -0.29
TCN1-203ENST00000532419 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
TCN1-203ENST00000532419 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
TCN1-203ENST00000532419 ATXN8OSP0DMR3 200 aa13.14□□□□□ -0.31
TCN1-203ENST00000532419 HAX1O00165 279 aa13.08□□□□□ -0.32
TCN1-203ENST00000532419 FXR2P51116 673 aaKnown RBP eCLIP13.08□□□□□ -0.32
TCN1-203ENST00000532419 FBLN2P98095 1184 aa13.04□□□□□ -0.32
TCN1-203ENST00000532419 SPDYE2BA6NHP3 402 aa13.02□□□□□ -0.33
TCN1-203ENST00000532419 SPDYE6P0CI01 402 aa13.02□□□□□ -0.33
TCN1-203ENST00000532419 SPDYE2Q495Y8 402 aa13.02□□□□□ -0.33
TCN1-203ENST00000532419 EHMT2Q96KQ7 1210 aa12.9□□□□□ -0.34
TCN1-203ENST00000532419 CSRNP3Q8WYN3 585 aa12.88□□□□□ -0.35
TCN1-203ENST00000532419 CLEC11AQ9Y240 323 aa12.88□□□□□ -0.35
TCN1-203ENST00000532419 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
TCN1-203ENST00000532419 SPDYE1Q8NFV5 336 aaPredicted RBP12.86□□□□□ -0.35
TCN1-203ENST00000532419 EVX2Q03828 476 aa12.85□□□□□ -0.35
TCN1-203ENST00000532419 ZNF692Q9BU19 519 aaPredicted RBP12.84□□□□□ -0.35
TCN1-203ENST00000532419 PRKAR2AP13861 404 aaKnown RBP12.83□□□□□ -0.36
TCN1-203ENST00000532419 SSUH2Q9Y2M2 353 aa12.79□□□□□ -0.36
TCN1-203ENST00000532419 C19orf67A6NJJ6 358 aa12.67□□□□□ -0.38
TCN1-203ENST00000532419 CHADLQ6NUI6 762 aa12.63□□□□□ -0.39
TCN1-203ENST00000532419 PABPN1Q86U42 306 aaKnown RBP eCLIP12.63□□□□□ -0.39
TCN1-203ENST00000532419 PRR29P0C7W0 189 aa12.62□□□□□ -0.39
TCN1-203ENST00000532419 GABBR2O75899 941 aa12.56□□□□□ -0.4
TCN1-203ENST00000532419 CD44P16070 742 aaKnown RBP12.41□□□□□ -0.42
TCN1-203ENST00000532419 FARP1Q9Y4F1 1045 aaPredicted RBP12.41□□□□□ -0.42
TCN1-203ENST00000532419 LHX8Q68G74 356 aa12.39□□□□□ -0.43
TCN1-203ENST00000532419 CLCN6P51797 869 aa12.28□□□□□ -0.44
TCN1-203ENST00000532419 POTEIP0CG38 1075 aa12.27□□□□□ -0.45
TCN1-203ENST00000532419 STAG3Q9UJ98 1225 aa12.24□□□□□ -0.45
TCN1-203ENST00000532419 DCBLD2Q96PD2 775 aa12.21□□□□□ -0.45
TCN1-203ENST00000532419 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
TCN1-203ENST00000532419 ZRANB1Q9UGI0 708 aa12.2□□□□□ -0.46
TCN1-203ENST00000532419 ZNF579Q8NAF0 562 aaKnown RBP12.18□□□□□ -0.46
TCN1-203ENST00000532419 SPDYE4A6NLX3 237 aa12.16□□□□□ -0.46
TCN1-203ENST00000532419 PAK3O75914 559 aaPredicted RBP12.07□□□□□ -0.48
TCN1-203ENST00000532419 GALR2O43603 387 aaPredicted RBP12.06□□□□□ -0.48
TCN1-203ENST00000532419 PLSCR2Q9NRY7 297 aa12.02□□□□□ -0.49
TCN1-203ENST00000532419 NPM1P06748 294 aaKnown RBP eCLIP12.01□□□□□ -0.49
TCN1-203ENST00000532419 PHF12Q96QT6 1004 aa12□□□□□ -0.49
TCN1-203ENST00000532419 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
TCN1-203ENST00000532419 OTUD5Q96G74 571 aa11.88□□□□□ -0.51
TCN1-203ENST00000532419 POTEB2H3BUK9 544 aa11.87□□□□□ -0.51
TCN1-203ENST00000532419 PELP1Q8IZL8 1130 aaKnown RBP11.84□□□□□ -0.51
TCN1-203ENST00000532419 MS4A3Q96HJ5 214 aa11.83□□□□□ -0.52
TCN1-203ENST00000532419 TSPYL2Q9H2G4 693 aaPredicted RBP11.79□□□□□ -0.52
TCN1-203ENST00000532419 ASTLQ6HA08 431 aaPredicted RBP11.78□□□□□ -0.52
TCN1-203ENST00000532419 PROM2Q8N271 834 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 1613.1 ms