RNA–Protein interactions for RNA: ENST00000531846.1

AP003969.1-201, humanhuman

TSL 2 BASIC

Gene AP003969.1, Length 400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003969.1-201ENST00000531846 AEBP2Q6ZN18 517 aaPredicted RBP23.33■■□□□ 1.33
AP003969.1-201ENST00000531846 CHIC1Q5VXU3 224 aa22.95■■□□□ 1.26
AP003969.1-201ENST00000531846 PHF23Q9BUL5 403 aaPredicted RBP20.16■□□□□ 0.82
AP003969.1-201ENST00000531846 SENP3Q9H4L4 574 aaPredicted RBP19.83■□□□□ 0.77
AP003969.1-201ENST00000531846 PLPPR3Q6T4P5 718 aa18.71■□□□□ 0.59
AP003969.1-201ENST00000531846 FOXD1Q16676 465 aa18.35■□□□□ 0.53
AP003969.1-201ENST00000531846 ADRA2BP18089 450 aa17.74■□□□□ 0.43
AP003969.1-201ENST00000531846 PPP6R1Q9UPN7 881 aa17.73■□□□□ 0.43
AP003969.1-201ENST00000531846 PIAS4Q8N2W9 510 aaPredicted RBP17.37■□□□□ 0.37
AP003969.1-201ENST00000531846 MSH5O43196 834 aa16.92■□□□□ 0.3
AP003969.1-201ENST00000531846 PPP4R3CPQ6ZMV5 832 aa16.48■□□□□ 0.23
AP003969.1-201ENST00000531846 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.2
AP003969.1-201ENST00000531846 KCNA4P22459 653 aa16.24■□□□□ 0.19
AP003969.1-201ENST00000531846 NCBP3Q53F19 620 aaKnown RBP16.11■□□□□ 0.17
AP003969.1-201ENST00000531846 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
AP003969.1-201ENST00000531846 CNKSR2Q8WXI2 1034 aa16.01■□□□□ 0.15
AP003969.1-201ENST00000531846 NPM3O75607 178 aaKnown RBP15.86■□□□□ 0.13
AP003969.1-201ENST00000531846 DMRT2Q9Y5R5 561 aa15.84■□□□□ 0.13
AP003969.1-201ENST00000531846 RNF216Q9NWF9 866 aaPredicted RBP15.66■□□□□ 0.1
AP003969.1-201ENST00000531846 HOXD11P31277 338 aaPredicted RBP15.56■□□□□ 0.08
AP003969.1-201ENST00000531846 SLC4A1APQ9BWU0 796 aaKnown RBP15.51■□□□□ 0.07
AP003969.1-201ENST00000531846 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
AP003969.1-201ENST00000531846 EHMT2Q96KQ7 1210 aa15.21■□□□□ 0.03
AP003969.1-201ENST00000531846 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
AP003969.1-201ENST00000531846 POTEDQ86YR6 584 aa15.14■□□□□ 0.01
AP003969.1-201ENST00000531846 CSRNP3Q8WYN3 585 aa14.95□□□□□ -0.02
AP003969.1-201ENST00000531846 ZBTB22O15209 634 aa14.94□□□□□ -0.02
AP003969.1-201ENST00000531846 FOXD4L1Q9NU39 408 aa14.94□□□□□ -0.02
AP003969.1-201ENST00000531846 SLC4A2P04920 1241 aa14.92□□□□□ -0.02
AP003969.1-201ENST00000531846 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.83□□□□□ -0.04
AP003969.1-201ENST00000531846 MYCNP04198 464 aaPredicted RBP14.68□□□□□ -0.06
AP003969.1-201ENST00000531846 U3KPZ7 1027 aaPredicted RBP14.6□□□□□ -0.07
AP003969.1-201ENST00000531846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.5□□□□□ -0.09
AP003969.1-201ENST00000531846 HNRNPUL2Q1KMD3 747 aaKnown RBP14.5□□□□□ -0.09
AP003969.1-201ENST00000531846 RNF39Q9H2S5 420 aa14.48□□□□□ -0.09
AP003969.1-201ENST00000531846 SAMD1Q6SPF0 538 aaPredicted RBP14.44□□□□□ -0.1
AP003969.1-201ENST00000531846 ATXN8OSP0DMR3 200 aa14.41□□□□□ -0.1
AP003969.1-201ENST00000531846 APLP2Q06481 763 aa14.33□□□□□ -0.12
AP003969.1-201ENST00000531846 C1QBPQ07021 282 aaKnown RBP14.33□□□□□ -0.12
AP003969.1-201ENST00000531846 ATF5Q9Y2D1 282 aaPredicted RBP14.23□□□□□ -0.13
AP003969.1-201ENST00000531846 SPINK5Q9NQ38 1064 aaPredicted RBP14.14□□□□□ -0.15
AP003969.1-201ENST00000531846 CAPN15O75808 1086 aa14.1□□□□□ -0.15
AP003969.1-201ENST00000531846 ZNF219Q9P2Y4 722 aaPredicted RBP14.09□□□□□ -0.15
AP003969.1-201ENST00000531846 TRHP20396 242 aaPredicted RBP14.05□□□□□ -0.16
AP003969.1-201ENST00000531846 CACNB1Q02641 598 aaPredicted RBP14.01□□□□□ -0.17
AP003969.1-201ENST00000531846 POLA2Q14181 598 aa13.85□□□□□ -0.19
AP003969.1-201ENST00000531846 ABCB7O75027 752 aa13.83□□□□□ -0.2
AP003969.1-201ENST00000531846 DSG3P32926 999 aa13.82□□□□□ -0.2
AP003969.1-201ENST00000531846 ZBTB12Q9Y330 459 aaPredicted RBP13.69□□□□□ -0.22
AP003969.1-201ENST00000531846 FBLN2P98095 1184 aa13.67□□□□□ -0.22
AP003969.1-201ENST00000531846 MKRN4PQ13434 485 aaPredicted RBP13.62□□□□□ -0.23
AP003969.1-201ENST00000531846 FKBP8Q14318 412 aa13.54□□□□□ -0.24
AP003969.1-201ENST00000531846 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
AP003969.1-201ENST00000531846 OSCARQ8IYS5 282 aa13.4□□□□□ -0.26
AP003969.1-201ENST00000531846 SPDYE2BA6NHP3 402 aa13.3□□□□□ -0.28
AP003969.1-201ENST00000531846 SPDYE6P0CI01 402 aa13.3□□□□□ -0.28
AP003969.1-201ENST00000531846 SPDYE2Q495Y8 402 aa13.3□□□□□ -0.28
AP003969.1-201ENST00000531846 ZNF692Q9BU19 519 aaPredicted RBP13.25□□□□□ -0.29
AP003969.1-201ENST00000531846 SSUH2Q9Y2M2 353 aa13.21□□□□□ -0.29
AP003969.1-201ENST00000531846 PROM2Q8N271 834 aa13.2□□□□□ -0.3
AP003969.1-201ENST00000531846 RBM42Q9BTD8 480 aaKnown RBP13.2□□□□□ -0.3
AP003969.1-201ENST00000531846 PABPN1Q86U42 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
AP003969.1-201ENST00000531846 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
AP003969.1-201ENST00000531846 FBXO3Q9UK99 471 aa13.04□□□□□ -0.32
AP003969.1-201ENST00000531846 REM2Q8IYK8 340 aaPredicted RBP12.91□□□□□ -0.34
AP003969.1-201ENST00000531846 STAG3Q9UJ98 1225 aa12.91□□□□□ -0.34
AP003969.1-201ENST00000531846 SPDYE1Q8NFV5 336 aaPredicted RBP12.88□□□□□ -0.35
AP003969.1-201ENST00000531846 VASPP50552 380 aaPredicted RBP12.85□□□□□ -0.35
AP003969.1-201ENST00000531846 CLEC11AQ9Y240 323 aa12.8□□□□□ -0.36
AP003969.1-201ENST00000531846 PITPNM1O00562 1244 aa12.77□□□□□ -0.37
AP003969.1-201ENST00000531846 PRR29P0C7W0 189 aa12.7□□□□□ -0.38
AP003969.1-201ENST00000531846 PLCD3Q8N3E9 789 aa12.7□□□□□ -0.38
AP003969.1-201ENST00000531846 MIER1Q8N108 512 aa12.68□□□□□ -0.38
AP003969.1-201ENST00000531846 PLEKHG5O94827 1062 aa12.66□□□□□ -0.38
AP003969.1-201ENST00000531846 IFNLR1Q8IU57 520 aaPredicted RBP12.66□□□□□ -0.38
AP003969.1-201ENST00000531846 AMER1Q5JTC6 1135 aaPredicted RBP12.59□□□□□ -0.39
AP003969.1-201ENST00000531846 KLHL34Q8N239 644 aa12.59□□□□□ -0.39
AP003969.1-201ENST00000531846 CHRDL2Q6WN34 429 aa12.58□□□□□ -0.4
AP003969.1-201ENST00000531846 ZBTB47Q9UFB7 747 aaPredicted RBP12.58□□□□□ -0.4
AP003969.1-201ENST00000531846 CREBZFQ9NS37 354 aa12.57□□□□□ -0.4
AP003969.1-201ENST00000531846 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.41
AP003969.1-201ENST00000531846 SPOCK2Q92563 424 aa12.51□□□□□ -0.41
AP003969.1-201ENST00000531846 FXR2P51116 673 aaKnown RBP eCLIP12.49□□□□□ -0.41
AP003969.1-201ENST00000531846 CHADLQ6NUI6 762 aa12.46□□□□□ -0.41
AP003969.1-201ENST00000531846 PRKAR2AP13861 404 aaKnown RBP12.45□□□□□ -0.42
AP003969.1-201ENST00000531846 MNX1P50219 401 aaPredicted RBP12.45□□□□□ -0.42
AP003969.1-201ENST00000531846 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
AP003969.1-201ENST00000531846 NPM1P06748 294 aaKnown RBP eCLIP12.39□□□□□ -0.43
AP003969.1-201ENST00000531846 FARP1Q9Y4F1 1045 aaPredicted RBP12.37□□□□□ -0.43
AP003969.1-201ENST00000531846 NUBP1P53384 320 aa12.35□□□□□ -0.43
AP003969.1-201ENST00000531846 PKD2Q13563 968 aa12.29□□□□□ -0.44
AP003969.1-201ENST00000531846 CIZ1Q9ULV3 898 aaPredicted RBP12.29□□□□□ -0.44
AP003969.1-201ENST00000531846 FAM212AQ96EL1 285 aa12.28□□□□□ -0.44
AP003969.1-201ENST00000531846 GSE1Q14687 1217 aa12.27□□□□□ -0.45
AP003969.1-201ENST00000531846 RASEFQ8IZ41 740 aa12.27□□□□□ -0.45
AP003969.1-201ENST00000531846 DCAF8Q5TAQ9 597 aa12.24□□□□□ -0.45
AP003969.1-201ENST00000531846 ECM2O94769 699 aaPredicted RBP12.21□□□□□ -0.45
AP003969.1-201ENST00000531846 TRIM41Q8WV44 630 aa12.2□□□□□ -0.46
AP003969.1-201ENST00000531846 PAK3O75914 559 aaPredicted RBP12.16□□□□□ -0.46
AP003969.1-201ENST00000531846 TSPYL2Q9H2G4 693 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms