RNA–Protein interactions for RNA: ENST00000531771.5

PICALM-216, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 3

Gene PICALM, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-216ENST00000531771 AEBP2Q6ZN18 517 aaPredicted RBP27.13■■□□□ 1.93
PICALM-216ENST00000531771 CHIC1Q5VXU3 224 aa25.55■■□□□ 1.68
PICALM-216ENST00000531771 SENP3Q9H4L4 574 aaPredicted RBP23.12■■□□□ 1.29
PICALM-216ENST00000531771 PHF23Q9BUL5 403 aaPredicted RBP22.8■■□□□ 1.24
PICALM-216ENST00000531771 FOXD1Q16676 465 aa21.6■■□□□ 1.05
PICALM-216ENST00000531771 PLPPR3Q6T4P5 718 aa20.29■□□□□ 0.84
PICALM-216ENST00000531771 MSH5O43196 834 aa20.26■□□□□ 0.83
PICALM-216ENST00000531771 POTEDQ86YR6 584 aa20.14■□□□□ 0.81
PICALM-216ENST00000531771 PIAS4Q8N2W9 510 aaPredicted RBP20.08■□□□□ 0.81
PICALM-216ENST00000531771 PPP6R1Q9UPN7 881 aa20.05■□□□□ 0.8
PICALM-216ENST00000531771 ADRA2BP18089 450 aa19.93■□□□□ 0.78
PICALM-216ENST00000531771 MAPK8IP2Q13387 824 aaPredicted RBP18.38■□□□□ 0.53
PICALM-216ENST00000531771 DMRT2Q9Y5R5 561 aa18.33■□□□□ 0.52
PICALM-216ENST00000531771 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
PICALM-216ENST00000531771 PPP4R3CPQ6ZMV5 832 aa17.75■□□□□ 0.43
PICALM-216ENST00000531771 HOXD11P31277 338 aaPredicted RBP17.6■□□□□ 0.41
PICALM-216ENST00000531771 CNKSR2Q8WXI2 1034 aa17.48■□□□□ 0.39
PICALM-216ENST00000531771 DCAF8L1A6NGE4 600 aa17.46■□□□□ 0.39
PICALM-216ENST00000531771 CACNB1Q02641 598 aaPredicted RBP17.46■□□□□ 0.39
PICALM-216ENST00000531771 RNF216Q9NWF9 866 aaPredicted RBP17.39■□□□□ 0.37
PICALM-216ENST00000531771 RNF39Q9H2S5 420 aa17.31■□□□□ 0.36
PICALM-216ENST00000531771 DNAJC5BQ9UF47 199 aa17.06■□□□□ 0.32
PICALM-216ENST00000531771 C1QBPQ07021 282 aaKnown RBP17.02■□□□□ 0.32
PICALM-216ENST00000531771 NCBP3Q53F19 620 aaKnown RBP16.97■□□□□ 0.31
PICALM-216ENST00000531771 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
PICALM-216ENST00000531771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.66■□□□□ 0.261e-7■□□□□ 8.4
PICALM-216ENST00000531771 U3KPZ7 1027 aaPredicted RBP16.38■□□□□ 0.21
PICALM-216ENST00000531771 KCNA4P22459 653 aa16.28■□□□□ 0.2
PICALM-216ENST00000531771 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
PICALM-216ENST00000531771 DSG3P32926 999 aa16.13■□□□□ 0.17
PICALM-216ENST00000531771 SLC4A2P04920 1241 aa16.11■□□□□ 0.17
PICALM-216ENST00000531771 CAPN15O75808 1086 aa16.09■□□□□ 0.17
PICALM-216ENST00000531771 APLP2Q06481 763 aa15.82■□□□□ 0.12
PICALM-216ENST00000531771 ZNF219Q9P2Y4 722 aaPredicted RBP15.8■□□□□ 0.12
PICALM-216ENST00000531771 TRHP20396 242 aaPredicted RBP15.79■□□□□ 0.12
PICALM-216ENST00000531771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.78■□□□□ 0.12
PICALM-216ENST00000531771 HNRNPUL2Q1KMD3 747 aaKnown RBP15.78■□□□□ 0.12
PICALM-216ENST00000531771 POTEHQ6S545 545 aa15.73■□□□□ 0.11
PICALM-216ENST00000531771 ABCB7O75027 752 aa15.72■□□□□ 0.11
PICALM-216ENST00000531771 SAMD1Q6SPF0 538 aaPredicted RBP15.69■□□□□ 0.1
PICALM-216ENST00000531771 MYCNP04198 464 aaPredicted RBP15.52■□□□□ 0.08
PICALM-216ENST00000531771 RBM42Q9BTD8 480 aaKnown RBP15.36■□□□□ 0.05
PICALM-216ENST00000531771 POLA2Q14181 598 aa15.35■□□□□ 0.05
PICALM-216ENST00000531771 SLC4A1APQ9BWU0 796 aaKnown RBP15.29■□□□□ 0.04
PICALM-216ENST00000531771 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
PICALM-216ENST00000531771 ATF5Q9Y2D1 282 aaPredicted RBP15.2■□□□□ 0.02
PICALM-216ENST00000531771 CHRDL2Q6WN34 429 aa15.11■□□□□ 0.01
PICALM-216ENST00000531771 ZBTB12Q9Y330 459 aaPredicted RBP15.03■□□□□ -0
PICALM-216ENST00000531771 ZBTB22O15209 634 aa15□□□□□ -0.01
PICALM-216ENST00000531771 AKT1S1Q96B36 256 aa14.98□□□□□ -0.01
PICALM-216ENST00000531771 OSCARQ8IYS5 282 aa14.89□□□□□ -0.03
PICALM-216ENST00000531771 REM2Q8IYK8 340 aaPredicted RBP14.83□□□□□ -0.04
PICALM-216ENST00000531771 ATXN8OSP0DMR3 200 aa14.82□□□□□ -0.04
PICALM-216ENST00000531771 PIP4P2Q8N4L2 257 aa14.72□□□□□ -0.05
PICALM-216ENST00000531771 PITPNM1O00562 1244 aa14.69□□□□□ -0.06
PICALM-216ENST00000531771 SP7Q8TDD2 431 aaPredicted RBP14.65□□□□□ -0.06
PICALM-216ENST00000531771 FXR2P51116 673 aaKnown RBP eCLIP14.63□□□□□ -0.07
PICALM-216ENST00000531771 SPDYE2BA6NHP3 402 aa14.57□□□□□ -0.08
PICALM-216ENST00000531771 SPDYE6P0CI01 402 aa14.57□□□□□ -0.08
PICALM-216ENST00000531771 SPDYE2Q495Y8 402 aa14.57□□□□□ -0.08
PICALM-216ENST00000531771 FBLN2P98095 1184 aa14.54□□□□□ -0.08
PICALM-216ENST00000531771 MKRN4PQ13434 485 aaPredicted RBP14.51□□□□□ -0.09
PICALM-216ENST00000531771 HAX1O00165 279 aa14.44□□□□□ -0.1
PICALM-216ENST00000531771 SSUH2Q9Y2M2 353 aa14.4□□□□□ -0.1
PICALM-216ENST00000531771 SPDYE1Q8NFV5 336 aaPredicted RBP14.34□□□□□ -0.11
PICALM-216ENST00000531771 EVX2Q03828 476 aa14.33□□□□□ -0.12
PICALM-216ENST00000531771 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
PICALM-216ENST00000531771 ZNF692Q9BU19 519 aaPredicted RBP14.32□□□□□ -0.12
PICALM-216ENST00000531771 PRKAR2AP13861 404 aaKnown RBP14.27□□□□□ -0.13
PICALM-216ENST00000531771 CLEC11AQ9Y240 323 aa14.27□□□□□ -0.13
PICALM-216ENST00000531771 C19orf67A6NJJ6 358 aa14.16□□□□□ -0.14
PICALM-216ENST00000531771 PABPN1Q86U42 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
PICALM-216ENST00000531771 CSRNP3Q8WYN3 585 aa14.11□□□□□ -0.15
PICALM-216ENST00000531771 CHADLQ6NUI6 762 aa14.08□□□□□ -0.16
PICALM-216ENST00000531771 PRR29P0C7W0 189 aa14.03□□□□□ -0.16
PICALM-216ENST00000531771 GABBR2O75899 941 aa13.98□□□□□ -0.17
PICALM-216ENST00000531771 FARP1Q9Y4F1 1045 aaPredicted RBP13.86□□□□□ -0.19
PICALM-216ENST00000531771 CD44P16070 742 aaKnown RBP13.81□□□□□ -0.2
PICALM-216ENST00000531771 POTEIP0CG38 1075 aa13.72□□□□□ -0.21
PICALM-216ENST00000531771 LHX8Q68G74 356 aa13.72□□□□□ -0.21
PICALM-216ENST00000531771 CREBZFQ9NS37 354 aa13.7□□□□□ -0.22
PICALM-216ENST00000531771 CLCN6P51797 869 aa13.69□□□□□ -0.22
PICALM-216ENST00000531771 STAG3Q9UJ98 1225 aa13.68□□□□□ -0.22
PICALM-216ENST00000531771 SPDYE4A6NLX3 237 aa13.65□□□□□ -0.22
PICALM-216ENST00000531771 ZNF579Q8NAF0 562 aaKnown RBP13.63□□□□□ -0.23
PICALM-216ENST00000531771 ZRANB1Q9UGI0 708 aa13.56□□□□□ -0.24
PICALM-216ENST00000531771 MNX1P50219 401 aaPredicted RBP13.49□□□□□ -0.25
PICALM-216ENST00000531771 DCBLD2Q96PD2 775 aa13.49□□□□□ -0.25
PICALM-216ENST00000531771 GALR2O43603 387 aaPredicted RBP13.46□□□□□ -0.25
PICALM-216ENST00000531771 PROM2Q8N271 834 aa13.41□□□□□ -0.26
PICALM-216ENST00000531771 PAK3O75914 559 aaPredicted RBP13.38□□□□□ -0.27
PICALM-216ENST00000531771 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
PICALM-216ENST00000531771 PHF12Q96QT6 1004 aa13.38□□□□□ -0.27
PICALM-216ENST00000531771 POTEB2H3BUK9 544 aa13.26□□□□□ -0.29
PICALM-216ENST00000531771 PELP1Q8IZL8 1130 aaKnown RBP13.24□□□□□ -0.29
PICALM-216ENST00000531771 OTUD5Q96G74 571 aa13.23□□□□□ -0.29
PICALM-216ENST00000531771 MS4A3Q96HJ5 214 aa13.22□□□□□ -0.29
PICALM-216ENST00000531771 ASTLQ6HA08 431 aaPredicted RBP13.2□□□□□ -0.3
PICALM-216ENST00000531771 CCDC61Q9Y6R9 512 aa13.16□□□□□ -0.3
PICALM-216ENST00000531771 ATMINO43313 823 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms