RNA–Protein interactions for RNA: ENST00000531768.1

RSF1-210, Transcript of remodeling and spacing factor 1, humanhuman

TSL 2

Gene RSF1, Length 626 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-210ENST00000531768 AEBP2Q6ZN18 517 aaPredicted RBP28.98■■■□□ 2.23
RSF1-210ENST00000531768 CHIC1Q5VXU3 224 aa27.39■■□□□ 1.98
RSF1-210ENST00000531768 SENP3Q9H4L4 574 aaPredicted RBP24.73■■□□□ 1.55
RSF1-210ENST00000531768 PHF23Q9BUL5 403 aaPredicted RBP24.39■■□□□ 1.49
RSF1-210ENST00000531768 FOXD1Q16676 465 aa23.06■■□□□ 1.28
RSF1-210ENST00000531768 PLPPR3Q6T4P5 718 aa21.82■■□□□ 1.08
RSF1-210ENST00000531768 MSH5O43196 834 aa21.64■■□□□ 1.05
RSF1-210ENST00000531768 PIAS4Q8N2W9 510 aaPredicted RBP21.52■■□□□ 1.04
RSF1-210ENST00000531768 PPP6R1Q9UPN7 881 aa21.48■■□□□ 1.03
RSF1-210ENST00000531768 ADRA2BP18089 450 aa21.39■■□□□ 1.01
RSF1-210ENST00000531768 POTEDQ86YR6 584 aa21.33■■□□□ 1.01
RSF1-210ENST00000531768 MAPK8IP2Q13387 824 aaPredicted RBP19.69■□□□□ 0.74
RSF1-210ENST00000531768 DMRT2Q9Y5R5 561 aa19.6■□□□□ 0.73
RSF1-210ENST00000531768 SCAF1Q9H7N4 1312 aaKnown RBP19.56■□□□□ 0.72
RSF1-210ENST00000531768 PPP4R3CPQ6ZMV5 832 aa19.11■□□□□ 0.65
RSF1-210ENST00000531768 HOXD11P31277 338 aaPredicted RBP18.83■□□□□ 0.6
RSF1-210ENST00000531768 CNKSR2Q8WXI2 1034 aa18.78■□□□□ 0.6
RSF1-210ENST00000531768 DCAF8L1A6NGE4 600 aa18.77■□□□□ 0.6
RSF1-210ENST00000531768 RNF216Q9NWF9 866 aaPredicted RBP18.65■□□□□ 0.58
RSF1-210ENST00000531768 CACNB1Q02641 598 aaPredicted RBP18.63■□□□□ 0.57
RSF1-210ENST00000531768 RNF39Q9H2S5 420 aa18.46■□□□□ 0.55
RSF1-210ENST00000531768 NCBP3Q53F19 620 aaKnown RBP18.33■□□□□ 0.52
RSF1-210ENST00000531768 DNAJC5BQ9UF47 199 aa18.21■□□□□ 0.51
RSF1-210ENST00000531768 C1QBPQ07021 282 aaKnown RBP18.18■□□□□ 0.5
RSF1-210ENST00000531768 NPM3O75607 178 aaKnown RBP18.08■□□□□ 0.48
RSF1-210ENST00000531768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.92■□□□□ 0.465e-10■■□□□ 12.6
RSF1-210ENST00000531768 KCNA4P22459 653 aa17.63■□□□□ 0.41
RSF1-210ENST00000531768 U3KPZ7 1027 aaPredicted RBP17.55■□□□□ 0.4
RSF1-210ENST00000531768 SPINK5Q9NQ38 1064 aaPredicted RBP17.33■□□□□ 0.36
RSF1-210ENST00000531768 SLC4A2P04920 1241 aa17.31■□□□□ 0.36
RSF1-210ENST00000531768 CAPN15O75808 1086 aa17.29■□□□□ 0.36
RSF1-210ENST00000531768 DSG3P32926 999 aa17.24■□□□□ 0.35
RSF1-210ENST00000531768 APLP2Q06481 763 aa17.03■□□□□ 0.32
RSF1-210ENST00000531768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17■□□□□ 0.31
RSF1-210ENST00000531768 HNRNPUL2Q1KMD3 747 aaKnown RBP17■□□□□ 0.31
RSF1-210ENST00000531768 TRHP20396 242 aaPredicted RBP16.98■□□□□ 0.31
RSF1-210ENST00000531768 ZNF219Q9P2Y4 722 aaPredicted RBP16.96■□□□□ 0.31
RSF1-210ENST00000531768 SAMD1Q6SPF0 538 aaPredicted RBP16.9■□□□□ 0.3
RSF1-210ENST00000531768 ABCB7O75027 752 aa16.88■□□□□ 0.29
RSF1-210ENST00000531768 MYCNP04198 464 aaPredicted RBP16.72■□□□□ 0.27
RSF1-210ENST00000531768 POTEHQ6S545 545 aa16.69■□□□□ 0.26
RSF1-210ENST00000531768 SLC4A1APQ9BWU0 796 aaKnown RBP16.6■□□□□ 0.25
RSF1-210ENST00000531768 POLA2Q14181 598 aa16.51■□□□□ 0.23
RSF1-210ENST00000531768 FOXD4L1Q9NU39 408 aa16.49■□□□□ 0.23
RSF1-210ENST00000531768 RBM42Q9BTD8 480 aaKnown RBP16.44■□□□□ 0.22
RSF1-210ENST00000531768 ATF5Q9Y2D1 282 aaPredicted RBP16.35■□□□□ 0.21
RSF1-210ENST00000531768 ZBTB22O15209 634 aa16.22■□□□□ 0.19
RSF1-210ENST00000531768 ZBTB12Q9Y330 459 aaPredicted RBP16.17■□□□□ 0.18
RSF1-210ENST00000531768 CHRDL2Q6WN34 429 aa16.14■□□□□ 0.17
RSF1-210ENST00000531768 AKT1S1Q96B36 256 aa16.04■□□□□ 0.16
RSF1-210ENST00000531768 OSCARQ8IYS5 282 aa16■□□□□ 0.15
RSF1-210ENST00000531768 ATXN8OSP0DMR3 200 aa15.99■□□□□ 0.15
RSF1-210ENST00000531768 REM2Q8IYK8 340 aaPredicted RBP15.89■□□□□ 0.13
RSF1-210ENST00000531768 PITPNM1O00562 1244 aa15.73■□□□□ 0.11
RSF1-210ENST00000531768 PIP4P2Q8N4L2 257 aa15.73■□□□□ 0.11
RSF1-210ENST00000531768 FBLN2P98095 1184 aa15.71■□□□□ 0.11
RSF1-210ENST00000531768 SPDYE2BA6NHP3 402 aa15.66■□□□□ 0.1
RSF1-210ENST00000531768 SPDYE6P0CI01 402 aa15.66■□□□□ 0.1
RSF1-210ENST00000531768 SPDYE2Q495Y8 402 aa15.66■□□□□ 0.1
RSF1-210ENST00000531768 FXR2P51116 673 aaKnown RBP eCLIP15.62■□□□□ 0.09
RSF1-210ENST00000531768 MKRN4PQ13434 485 aaPredicted RBP15.6■□□□□ 0.09
RSF1-210ENST00000531768 SP7Q8TDD2 431 aaPredicted RBP15.59■□□□□ 0.09
RSF1-210ENST00000531768 HAX1O00165 279 aa15.46■□□□□ 0.07
RSF1-210ENST00000531768 SSUH2Q9Y2M2 353 aa15.45■□□□□ 0.06
RSF1-210ENST00000531768 ZNF692Q9BU19 519 aaPredicted RBP15.44■□□□□ 0.06
RSF1-210ENST00000531768 SPDYE1Q8NFV5 336 aaPredicted RBP15.42■□□□□ 0.06
RSF1-210ENST00000531768 CLEC11AQ9Y240 323 aa15.38■□□□□ 0.05
RSF1-210ENST00000531768 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
RSF1-210ENST00000531768 PRKAR2AP13861 404 aaKnown RBP15.31■□□□□ 0.04
RSF1-210ENST00000531768 EVX2Q03828 476 aa15.28■□□□□ 0.04
RSF1-210ENST00000531768 PABPN1Q86U42 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
RSF1-210ENST00000531768 C19orf67A6NJJ6 358 aa15.12■□□□□ 0.01
RSF1-210ENST00000531768 PRR29P0C7W0 189 aa15.11■□□□□ 0.01
RSF1-210ENST00000531768 CHADLQ6NUI6 762 aa15.11■□□□□ 0.01
RSF1-210ENST00000531768 EHMT2Q96KQ7 1210 aa15.06■□□□□ 0
RSF1-210ENST00000531768 GABBR2O75899 941 aa14.92□□□□□ -0.02
RSF1-210ENST00000531768 FARP1Q9Y4F1 1045 aaPredicted RBP14.89□□□□□ -0.03
RSF1-210ENST00000531768 CD44P16070 742 aaKnown RBP14.82□□□□□ -0.04
RSF1-210ENST00000531768 SPDYE4A6NLX3 237 aa14.79□□□□□ -0.04
RSF1-210ENST00000531768 STAG3Q9UJ98 1225 aa14.77□□□□□ -0.05
RSF1-210ENST00000531768 CREBZFQ9NS37 354 aa14.72□□□□□ -0.05
RSF1-210ENST00000531768 CLCN6P51797 869 aa14.64□□□□□ -0.07
RSF1-210ENST00000531768 POTEIP0CG38 1075 aa14.62□□□□□ -0.07
RSF1-210ENST00000531768 LHX8Q68G74 356 aa14.61□□□□□ -0.07
RSF1-210ENST00000531768 ZNF579Q8NAF0 562 aaKnown RBP14.6□□□□□ -0.07
RSF1-210ENST00000531768 ZRANB1Q9UGI0 708 aa14.59□□□□□ -0.07
RSF1-210ENST00000531768 DCBLD2Q96PD2 775 aa14.48□□□□□ -0.09
RSF1-210ENST00000531768 MNX1P50219 401 aaPredicted RBP14.47□□□□□ -0.09
RSF1-210ENST00000531768 PROM2Q8N271 834 aa14.44□□□□□ -0.1
RSF1-210ENST00000531768 PAK3O75914 559 aaPredicted RBP14.43□□□□□ -0.1
RSF1-210ENST00000531768 NPM1P06748 294 aaKnown RBP eCLIP14.43□□□□□ -0.1
RSF1-210ENST00000531768 GALR2O43603 387 aaPredicted RBP14.42□□□□□ -0.1
RSF1-210ENST00000531768 PHF12Q96QT6 1004 aa14.39□□□□□ -0.11
RSF1-210ENST00000531768 MS4A3Q96HJ5 214 aa14.19□□□□□ -0.14
RSF1-210ENST00000531768 TSPYL2Q9H2G4 693 aaPredicted RBP14.17□□□□□ -0.14
RSF1-210ENST00000531768 PELP1Q8IZL8 1130 aaKnown RBP14.16□□□□□ -0.14
RSF1-210ENST00000531768 POTEB2H3BUK9 544 aa14.13□□□□□ -0.15
RSF1-210ENST00000531768 CCDC61Q9Y6R9 512 aa14.13□□□□□ -0.15
RSF1-210ENST00000531768 ASTLQ6HA08 431 aaPredicted RBP14.12□□□□□ -0.15
RSF1-210ENST00000531768 MIER1Q8N108 512 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms