RNA–Protein interactions for RNA: ENST00000531613.1

PCDHA8-202, Transcript of protocadherin alpha 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA8, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8-202ENST00000531613 DCAF8L2P0C7V8 631 aa30.51■■■□□ 2.47
PCDHA8-202ENST00000531613 SUPT5HO00267 1087 aaKnown RBP28.78■■■□□ 2.2
PCDHA8-202ENST00000531613 NISCHQ9Y2I1 1504 aa28.77■■■□□ 2.2
PCDHA8-202ENST00000531613 SHROOM4Q9ULL8 1493 aa28.21■■■□□ 2.11
PCDHA8-202ENST00000531613 EHMT2Q96KQ7 1210 aa27.83■■■□□ 2.05
PCDHA8-202ENST00000531613 APLP2Q06481 763 aa27.55■■■□□ 2
PCDHA8-202ENST00000531613 FAM9AQ8IZU1 332 aaPredicted RBP27.26■■□□□ 1.95
PCDHA8-202ENST00000531613 PELP1Q8IZL8 1130 aaKnown RBP27.26■■□□□ 1.95
PCDHA8-202ENST00000531613 TTBK1Q5TCY1 1321 aaPredicted RBP26.88■■□□□ 1.89
PCDHA8-202ENST00000531613 RANGAP1P46060 587 aaPredicted RBP26.72■■□□□ 1.87
PCDHA8-202ENST00000531613 TRIM41Q8WV44 630 aa26.7■■□□□ 1.87
PCDHA8-202ENST00000531613 PCGF6Q9BYE7 350 aa26.68■■□□□ 1.86
PCDHA8-202ENST00000531613 ATP1B4Q9UN42 357 aaPredicted RBP26.58■■□□□ 1.85
PCDHA8-202ENST00000531613 UBTFP17480 764 aaKnown RBP26.46■■□□□ 1.83
PCDHA8-202ENST00000531613 CCER1Q8TC90 406 aaPredicted RBP26.38■■□□□ 1.81
PCDHA8-202ENST00000531613 ZEB1P37275 1124 aaPredicted RBP26.37■■□□□ 1.81
PCDHA8-202ENST00000531613 CENPBP07199 599 aaPredicted RBP26.27■■□□□ 1.8
PCDHA8-202ENST00000531613 ERICH6Q7L0X2 663 aa26.04■■□□□ 1.76
PCDHA8-202ENST00000531613 NEFLP07196 543 aa25.84■■□□□ 1.73
PCDHA8-202ENST00000531613 PPARGC1BQ86YN6 1023 aaKnown RBP25.78■■□□□ 1.72
PCDHA8-202ENST00000531613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.72■■□□□ 1.71
PCDHA8-202ENST00000531613 HNRNPUL2Q1KMD3 747 aaKnown RBP25.72■■□□□ 1.71
PCDHA8-202ENST00000531613 MYT1LQ9UL68 1186 aa25.68■■□□□ 1.7
PCDHA8-202ENST00000531613 YTHDC1Q96MU7 727 aaKnown RBP25.67■■□□□ 1.7
PCDHA8-202ENST00000531613 TRIM26Q12899 539 aaPredicted RBP25.61■■□□□ 1.69
PCDHA8-202ENST00000531613 ITGAEP38570 1179 aa25.58■■□□□ 1.69
PCDHA8-202ENST00000531613 POLR3GLQ9BT43 218 aa25.4■■□□□ 1.66
PCDHA8-202ENST00000531613 CHIC1Q5VXU3 224 aa25.33■■□□□ 1.65
PCDHA8-202ENST00000531613 LOC105371045A0A1W2PR82 267 aa25.32■■□□□ 1.64
PCDHA8-202ENST00000531613 HRCP23327 699 aa25.18■■□□□ 1.62
PCDHA8-202ENST00000531613 DAXXQ9UER7 740 aaPredicted RBP25.11■■□□□ 1.61
PCDHA8-202ENST00000531613 CNGB1Q14028 1251 aaPredicted RBP25.08■■□□□ 1.61
PCDHA8-202ENST00000531613 PABPN1Q86U42 306 aaKnown RBP eCLIP25.07■■□□□ 1.6
PCDHA8-202ENST00000531613 ABCC9O60706 1549 aa25.06■■□□□ 1.6
PCDHA8-202ENST00000531613 MYT1Q01538 1121 aa25.02■■□□□ 1.6
PCDHA8-202ENST00000531613 SLC4A1APQ9BWU0 796 aaKnown RBP25.01■■□□□ 1.59
PCDHA8-202ENST00000531613 FAM50AQ14320 339 aaKnown RBP24.95■■□□□ 1.58
PCDHA8-202ENST00000531613 TRIM52Q96A61 297 aa24.85■■□□□ 1.57
PCDHA8-202ENST00000531613 FBLN2P98095 1184 aa24.7■■□□□ 1.54
PCDHA8-202ENST00000531613 DIEXFQ68CQ4 756 aaKnown RBP24.67■■□□□ 1.54
PCDHA8-202ENST00000531613 CLSPNQ9HAW4 1339 aa24.65■■□□□ 1.54
PCDHA8-202ENST00000531613 NEUROD1Q13562 356 aa24.65■■□□□ 1.54
PCDHA8-202ENST00000531613 ZNF326Q5BKZ1 582 aaKnown RBP24.55■■□□□ 1.52
PCDHA8-202ENST00000531613 ZNF316A6NFI3 1004 aaPredicted RBP24.49■■□□□ 1.51
PCDHA8-202ENST00000531613 ANP32CO43423 234 aa24.41■■□□□ 1.5
PCDHA8-202ENST00000531613 RTL5Q5HYW3 569 aaPredicted RBP24.39■■□□□ 1.49
PCDHA8-202ENST00000531613 P3H3Q8IVL6 736 aa24.36■■□□□ 1.49
PCDHA8-202ENST00000531613 CSRNP3Q8WYN3 585 aa24.36■■□□□ 1.49
PCDHA8-202ENST00000531613 ARID3CA6NKF2 412 aa24.32■■□□□ 1.48
PCDHA8-202ENST00000531613 ZBTB47Q9UFB7 747 aaPredicted RBP24.29■■□□□ 1.48
PCDHA8-202ENST00000531613 BCANQ96GW7 911 aa24.26■■□□□ 1.47
PCDHA8-202ENST00000531613 CDK11AQ9UQ88 783 aaPredicted RBP24.26■■□□□ 1.47
PCDHA8-202ENST00000531613 ZNF777Q9ULD5 760 aaPredicted RBP24.22■■□□□ 1.47
PCDHA8-202ENST00000531613 NEFMP07197 916 aa24.21■■□□□ 1.47
PCDHA8-202ENST00000531613 SLC24A1O60721 1099 aa24.16■■□□□ 1.46
PCDHA8-202ENST00000531613 CANXP27824 592 aaKnown RBP24.12■■□□□ 1.45
PCDHA8-202ENST00000531613 ESF1Q9H501 851 aaKnown RBP24.08■■□□□ 1.45
PCDHA8-202ENST00000531613 SCRIBQ14160 1630 aa24.03■■□□□ 1.44
PCDHA8-202ENST00000531613 GTF3C3Q9Y5Q9 886 aa23.99■■□□□ 1.43
PCDHA8-202ENST00000531613 NPM1P06748 294 aaKnown RBP eCLIP23.98■■□□□ 1.43
PCDHA8-202ENST00000531613 BCL11AQ9H165 835 aa23.97■■□□□ 1.43
PCDHA8-202ENST00000531613 STAG3Q9UJ98 1225 aa23.92■■□□□ 1.42
PCDHA8-202ENST00000531613 CHGAP10645 457 aaKnown RBP23.91■■□□□ 1.42
PCDHA8-202ENST00000531613 TONSLQ96HA7 1378 aa23.88■■□□□ 1.41
PCDHA8-202ENST00000531613 ZCCHC6Q5VYS8 1495 aaKnown RBP23.73■■□□□ 1.39
PCDHA8-202ENST00000531613 PLPPR3Q6T4P5 718 aa23.72■■□□□ 1.39
PCDHA8-202ENST00000531613 TSPY4P0CV99 314 aa23.69■■□□□ 1.38
PCDHA8-202ENST00000531613 TSPY10P0CW01 314 aa23.69■■□□□ 1.38
PCDHA8-202ENST00000531613 CHIC2Q9UKJ5 165 aa23.69■■□□□ 1.38
PCDHA8-202ENST00000531613 ANP32AP39687 249 aaKnown RBP23.68■■□□□ 1.38
PCDHA8-202ENST00000531613 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.68■■□□□ 1.38
PCDHA8-202ENST00000531613 CHMP7Q8WUX9 453 aaPredicted RBP23.64■■□□□ 1.37
PCDHA8-202ENST00000531613 ACIN1Q9UKV3 1341 aaKnown RBP23.64■■□□□ 1.37
PCDHA8-202ENST00000531613 MTUS2Q5JR59 1369 aa23.61■■□□□ 1.37
PCDHA8-202ENST00000531613 HNRNPUQ00839 825 aaKnown RBP eCLIP23.59■■□□□ 1.37
PCDHA8-202ENST00000531613 DDX10Q13206 875 aaKnown RBP23.59■■□□□ 1.37
PCDHA8-202ENST00000531613 FAM9BQ8IZU0 186 aa23.56■■□□□ 1.36
PCDHA8-202ENST00000531613 NPM2Q86SE8 214 aaKnown RBP23.54■■□□□ 1.36
PCDHA8-202ENST00000531613 TMC1Q8TDI8 760 aa23.52■■□□□ 1.36
PCDHA8-202ENST00000531613 FKBP8Q14318 412 aa23.49■■□□□ 1.35
PCDHA8-202ENST00000531613 DCAF1Q9Y4B6 1507 aa23.49■■□□□ 1.35
PCDHA8-202ENST00000531613 KDM2AQ9Y2K7 1162 aa23.48■■□□□ 1.35
PCDHA8-202ENST00000531613 SALL2Q9Y467 1007 aaPredicted RBP23.48■■□□□ 1.35
PCDHA8-202ENST00000531613 UPF2Q9HAU5 1272 aaKnown RBP23.48■■□□□ 1.35
PCDHA8-202ENST00000531613 HSP90AA1P07900 732 aaKnown RBP23.47■■□□□ 1.35
PCDHA8-202ENST00000531613 WDR43Q15061 677 aaKnown RBP eCLIP23.44■■□□□ 1.34
PCDHA8-202ENST00000531613 CLIP1P30622 1438 aa23.43■■□□□ 1.34
PCDHA8-202ENST00000531613 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.42■■□□□ 1.34
PCDHA8-202ENST00000531613 MRS2Q9HD23 443 aa23.37■■□□□ 1.33
PCDHA8-202ENST00000531613 PLEKHD1A6NEE1 506 aa23.36■■□□□ 1.33
PCDHA8-202ENST00000531613 CCDC180Q9P1Z9 1646 aa23.35■■□□□ 1.33
PCDHA8-202ENST00000531613 ANP32BQ92688 251 aaKnown RBP23.35■■□□□ 1.33
PCDHA8-202ENST00000531613 KCNH8Q96L42 1107 aa23.34■■□□□ 1.33
PCDHA8-202ENST00000531613 RB1CC1Q8TDY2 1594 aa23.33■■□□□ 1.33
PCDHA8-202ENST00000531613 RRP7BPQ9NSQ0 103 aa23.32■■□□□ 1.32
PCDHA8-202ENST00000531613 CCDC136Q96JN2 1154 aa23.31■■□□□ 1.32
PCDHA8-202ENST00000531613 RSF1Q96T23 1441 aaPredicted RBP23.31■■□□□ 1.32
PCDHA8-202ENST00000531613 SCAF1Q9H7N4 1312 aaKnown RBP23.31■■□□□ 1.32
PCDHA8-202ENST00000531613 EIF4G2P78344 907 aaKnown RBP eCLIP23.29■■□□□ 1.32
PCDHA8-202ENST00000531613 PPP1R15AO75807 674 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms