RNA–Protein interactions for RNA: ENST00000531294.5

ARHGAP28-205, Transcript of Rho GTPase activating protein 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGAP28, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-205ENST00000531294 AEBP2Q6ZN18 517 aaPredicted RBP14.17□□□□□ -0.14
ARHGAP28-205ENST00000531294 CHIC1Q5VXU3 224 aa13.63□□□□□ -0.23
ARHGAP28-205ENST00000531294 POTEDQ86YR6 584 aa13.27□□□□□ -0.29
ARHGAP28-205ENST00000531294 PHF23Q9BUL5 403 aaPredicted RBP12.06□□□□□ -0.48
ARHGAP28-205ENST00000531294 SENP3Q9H4L4 574 aaPredicted RBP11.92□□□□□ -0.5
ARHGAP28-205ENST00000531294 FOXD1Q16676 465 aa11.16□□□□□ -0.62
ARHGAP28-205ENST00000531294 PLPPR3Q6T4P5 718 aa11□□□□□ -0.65
ARHGAP28-205ENST00000531294 PPP6R1Q9UPN7 881 aa10.71□□□□□ -0.69
ARHGAP28-205ENST00000531294 ADRA2BP18089 450 aa10.69□□□□□ -0.7
ARHGAP28-205ENST00000531294 PIAS4Q8N2W9 510 aaPredicted RBP10.5□□□□□ -0.73
ARHGAP28-205ENST00000531294 MSH5O43196 834 aa10.41□□□□□ -0.74
ARHGAP28-205ENST00000531294 SLC24A1O60721 1099 aa10.17□□□□□ -0.78
ARHGAP28-205ENST00000531294 POTEHQ6S545 545 aa10.05□□□□□ -0.8
ARHGAP28-205ENST00000531294 CACNB1Q02641 598 aaPredicted RBP9.99□□□□□ -0.81
ARHGAP28-205ENST00000531294 MYT1Q01538 1121 aa9.81□□□□□ -0.84
ARHGAP28-205ENST00000531294 PELP1Q8IZL8 1130 aaKnown RBP9.77□□□□□ -0.85
ARHGAP28-205ENST00000531294 MAPK8IP2Q13387 824 aaPredicted RBP9.75□□□□□ -0.85
ARHGAP28-205ENST00000531294 PPP4R3CPQ6ZMV5 832 aa9.72□□□□□ -0.85
ARHGAP28-205ENST00000531294 TTBK1Q5TCY1 1321 aaPredicted RBP9.66□□□□□ -0.86
ARHGAP28-205ENST00000531294 SCAF1Q9H7N4 1312 aaKnown RBP9.61□□□□□ -0.87
ARHGAP28-205ENST00000531294 PRKCSHP14314 528 aaPredicted RBP9.55□□□□□ -0.88
ARHGAP28-205ENST00000531294 DMRT2Q9Y5R5 561 aa9.51□□□□□ -0.89
ARHGAP28-205ENST00000531294 DAXXQ9UER7 740 aaPredicted RBP9.47□□□□□ -0.89
ARHGAP28-205ENST00000531294 APLP2Q06481 763 aa9.46□□□□□ -0.89
ARHGAP28-205ENST00000531294 KCNA4P22459 653 aa9.45□□□□□ -0.9
ARHGAP28-205ENST00000531294 CNKSR2Q8WXI2 1034 aa9.43□□□□□ -0.9
ARHGAP28-205ENST00000531294 ERICH6Q7L0X2 663 aa9.36□□□□□ -0.91
ARHGAP28-205ENST00000531294 NCBP3Q53F19 620 aaKnown RBP9.35□□□□□ -0.91
ARHGAP28-205ENST00000531294 NPM3O75607 178 aaKnown RBP9.32□□□□□ -0.92
ARHGAP28-205ENST00000531294 RNF216Q9NWF9 866 aaPredicted RBP9.26□□□□□ -0.93
ARHGAP28-205ENST00000531294 HOXD11P31277 338 aaPredicted RBP9.26□□□□□ -0.93
ARHGAP28-205ENST00000531294 DCAF8L1A6NGE4 600 aa9.21□□□□□ -0.94
ARHGAP28-205ENST00000531294 PLSCR2Q9NRY7 297 aa9.05□□□□□ -0.96
ARHGAP28-205ENST00000531294 SLC4A1APQ9BWU0 796 aaKnown RBP8.92□□□□□ -0.98
ARHGAP28-205ENST00000531294 DNAJC5BQ9UF47 199 aa8.9□□□□□ -0.98
ARHGAP28-205ENST00000531294 EHMT2Q96KQ7 1210 aa8.89□□□□□ -0.99
ARHGAP28-205ENST00000531294 EIF5BO60841 1220 aaKnown RBP8.88□□□□□ -0.99
ARHGAP28-205ENST00000531294 RTN4Q9NQC3 1192 aaKnown RBP8.88□□□□□ -0.99
ARHGAP28-205ENST00000531294 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.87□□□□□ -0.99
ARHGAP28-205ENST00000531294 SLC4A2P04920 1241 aa8.85□□□□□ -0.99
ARHGAP28-205ENST00000531294 BCL11AQ9H165 835 aa8.83□□□□□ -1
ARHGAP28-205ENST00000531294 RNF39Q9H2S5 420 aa8.81□□□□□ -1
ARHGAP28-205ENST00000531294 ARXQ96QS3 562 aa8.75□□□□□ -1.01
ARHGAP28-205ENST00000531294 U3KPZ7 1027 aaPredicted RBP8.74□□□□□ -1.01
ARHGAP28-205ENST00000531294 ZBTB22O15209 634 aa8.73□□□□□ -1.01
ARHGAP28-205ENST00000531294 NISCHQ9Y2I1 1504 aa8.7□□□□□ -1.02
ARHGAP28-205ENST00000531294 FAM9AQ8IZU1 332 aaPredicted RBP8.69□□□□□ -1.02
ARHGAP28-205ENST00000531294 TIMELESSQ9UNS1 1208 aa8.67□□□□□ -1.02
ARHGAP28-205ENST00000531294 PLEKHG5O94827 1062 aa8.66□□□□□ -1.02
ARHGAP28-205ENST00000531294 C1QBPQ07021 282 aaKnown RBP8.64□□□□□ -1.03
ARHGAP28-205ENST00000531294 FOXD4L1Q9NU39 408 aa8.64□□□□□ -1.03
ARHGAP28-205ENST00000531294 RANGAP1P46060 587 aaPredicted RBP8.61□□□□□ -1.03
ARHGAP28-205ENST00000531294 KLHL34Q8N239 644 aa8.61□□□□□ -1.03
ARHGAP28-205ENST00000531294 SPINK5Q9NQ38 1064 aaPredicted RBP8.58□□□□□ -1.04
ARHGAP28-205ENST00000531294 MYCNP04198 464 aaPredicted RBP8.55□□□□□ -1.04
ARHGAP28-205ENST00000531294 AMER1Q5JTC6 1135 aaPredicted RBP8.54□□□□□ -1.04
ARHGAP28-205ENST00000531294 CSRNP3Q8WYN3 585 aa8.54□□□□□ -1.04
ARHGAP28-205ENST00000531294 SP7Q8TDD2 431 aaPredicted RBP8.53□□□□□ -1.04
ARHGAP28-205ENST00000531294 CAPN15O75808 1086 aa8.5□□□□□ -1.05
ARHGAP28-205ENST00000531294 TULP1O00294 542 aaPredicted RBP8.48□□□□□ -1.05
ARHGAP28-205ENST00000531294 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.46□□□□□ -1.05
ARHGAP28-205ENST00000531294 HNRNPUL2Q1KMD3 747 aaKnown RBP8.46□□□□□ -1.05
ARHGAP28-205ENST00000531294 SAMD1Q6SPF0 538 aaPredicted RBP8.46□□□□□ -1.05
ARHGAP28-205ENST00000531294 TRHP20396 242 aaPredicted RBP8.46□□□□□ -1.06
ARHGAP28-205ENST00000531294 ATF5Q9Y2D1 282 aaPredicted RBP8.46□□□□□ -1.06
ARHGAP28-205ENST00000531294 HOMEZQ8IX15 550 aa8.44□□□□□ -1.06
ARHGAP28-205ENST00000531294 PODXL2Q9NZ53 605 aa8.43□□□□□ -1.06
ARHGAP28-205ENST00000531294 ABCB7O75027 752 aa8.39□□□□□ -1.07
ARHGAP28-205ENST00000531294 DSG3P32926 999 aa8.37□□□□□ -1.07
ARHGAP28-205ENST00000531294 ZNF219Q9P2Y4 722 aaPredicted RBP8.36□□□□□ -1.07
ARHGAP28-205ENST00000531294 UBE2Q2Q8WVN8 375 aa8.34□□□□□ -1.07
ARHGAP28-205ENST00000531294 TAOK2Q9UL54 1235 aa8.32□□□□□ -1.08
ARHGAP28-205ENST00000531294 POLA2Q14181 598 aa8.28□□□□□ -1.08
ARHGAP28-205ENST00000531294 ATXN8OSP0DMR3 200 aa8.26□□□□□ -1.09
ARHGAP28-205ENST00000531294 PDIA4P13667 645 aaKnown RBP8.24□□□□□ -1.09
ARHGAP28-205ENST00000531294 NPM2Q86SE8 214 aaKnown RBP8.21□□□□□ -1.09
ARHGAP28-205ENST00000531294 CENPBP07199 599 aaPredicted RBP8.2□□□□□ -1.1
ARHGAP28-205ENST00000531294 HRCP23327 699 aa8.2□□□□□ -1.1
ARHGAP28-205ENST00000531294 TPRNQ4KMQ1 711 aa8.18□□□□□ -1.1
ARHGAP28-205ENST00000531294 PKNOX2Q96KN3 472 aa8.16□□□□□ -1.1
ARHGAP28-205ENST00000531294 PDE4CQ08493 712 aa8.13□□□□□ -1.11
ARHGAP28-205ENST00000531294 C14orf37Q86TY3 774 aa8.12□□□□□ -1.11
ARHGAP28-205ENST00000531294 GTF3C3Q9Y5Q9 886 aa8.12□□□□□ -1.11
ARHGAP28-205ENST00000531294 BCANQ96GW7 911 aa8.11□□□□□ -1.11
ARHGAP28-205ENST00000531294 LOC105371045A0A1W2PR82 267 aa8.1□□□□□ -1.11
ARHGAP28-205ENST00000531294 ANO8Q9HCE9 1232 aaPredicted RBP8.1□□□□□ -1.11
ARHGAP28-205ENST00000531294 NEFLP07196 543 aa8.08□□□□□ -1.12
ARHGAP28-205ENST00000531294 MKRN4PQ13434 485 aaPredicted RBP8.05□□□□□ -1.12
ARHGAP28-205ENST00000531294 CHMP4AQ9BY43 222 aa8.04□□□□□ -1.12
ARHGAP28-205ENST00000531294 OSCARQ8IYS5 282 aa8.04□□□□□ -1.12
ARHGAP28-205ENST00000531294 FBXO3Q9UK99 471 aa8.03□□□□□ -1.12
ARHGAP28-205ENST00000531294 ANP32EQ9BTT0 268 aa8.02□□□□□ -1.13
ARHGAP28-205ENST00000531294 ZBTB12Q9Y330 459 aaPredicted RBP8□□□□□ -1.13
ARHGAP28-205ENST00000531294 HAP1P54257 671 aaPredicted RBP7.99□□□□□ -1.13
ARHGAP28-205ENST00000531294 TAF7LQ5H9L4 462 aa7.99□□□□□ -1.13
ARHGAP28-205ENST00000531294 TRIM26Q12899 539 aaPredicted RBP7.98□□□□□ -1.13
ARHGAP28-205ENST00000531294 BCL11BQ9C0K0 894 aaPredicted RBP7.98□□□□□ -1.13
ARHGAP28-205ENST00000531294 FBLN2P98095 1184 aa7.97□□□□□ -1.13
ARHGAP28-205ENST00000531294 DHX37Q8IY37 1157 aaKnown RBP7.97□□□□□ -1.13
ARHGAP28-205ENST00000531294 FGD1P98174 961 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms