RNA–Protein interactions for RNA: ENST00000531023.1

PSMA1-210, Transcript of proteasome subunit alpha 1, humanhuman

TSL 2

Gene PSMA1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-210ENST00000531023 AEBP2Q6ZN18 517 aaPredicted RBP26.48■■□□□ 1.83
PSMA1-210ENST00000531023 CHIC1Q5VXU3 224 aa25.25■■□□□ 1.63
PSMA1-210ENST00000531023 SENP3Q9H4L4 574 aaPredicted RBP22.68■■□□□ 1.22
PSMA1-210ENST00000531023 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
PSMA1-210ENST00000531023 FOXD1Q16676 465 aa21.07■□□□□ 0.96
PSMA1-210ENST00000531023 PLPPR3Q6T4P5 718 aa20.24■□□□□ 0.83
PSMA1-210ENST00000531023 MSH5O43196 834 aa19.78■□□□□ 0.76
PSMA1-210ENST00000531023 PIAS4Q8N2W9 510 aaPredicted RBP19.74■□□□□ 0.75
PSMA1-210ENST00000531023 PPP6R1Q9UPN7 881 aa19.71■□□□□ 0.75
PSMA1-210ENST00000531023 ADRA2BP18089 450 aa19.67■□□□□ 0.74
PSMA1-210ENST00000531023 POTEDQ86YR6 584 aa19.16■□□□□ 0.66
PSMA1-210ENST00000531023 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
PSMA1-210ENST00000531023 MAPK8IP2Q13387 824 aaPredicted RBP18.05■□□□□ 0.48
PSMA1-210ENST00000531023 DMRT2Q9Y5R5 561 aa17.97■□□□□ 0.47
PSMA1-210ENST00000531023 PPP4R3CPQ6ZMV5 832 aa17.72■□□□□ 0.43
PSMA1-210ENST00000531023 CNKSR2Q8WXI2 1034 aa17.4■□□□□ 0.38
PSMA1-210ENST00000531023 HOXD11P31277 338 aaPredicted RBP17.32■□□□□ 0.36
PSMA1-210ENST00000531023 DCAF8L1A6NGE4 600 aa17.28■□□□□ 0.36
PSMA1-210ENST00000531023 RNF216Q9NWF9 866 aaPredicted RBP17.22■□□□□ 0.35
PSMA1-210ENST00000531023 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
PSMA1-210ENST00000531023 CACNB1Q02641 598 aaPredicted RBP16.95■□□□□ 0.3
PSMA1-210ENST00000531023 RNF39Q9H2S5 420 aa16.83■□□□□ 0.28
PSMA1-210ENST00000531023 NPM3O75607 178 aaKnown RBP16.78■□□□□ 0.28
PSMA1-210ENST00000531023 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
PSMA1-210ENST00000531023 C1QBPQ07021 282 aaKnown RBP16.64■□□□□ 0.25
PSMA1-210ENST00000531023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.56■□□□□ 0.24
PSMA1-210ENST00000531023 KCNA4P22459 653 aa16.49■□□□□ 0.23
PSMA1-210ENST00000531023 U3KPZ7 1027 aaPredicted RBP16.14■□□□□ 0.17
PSMA1-210ENST00000531023 SLC4A2P04920 1241 aa15.99■□□□□ 0.15
PSMA1-210ENST00000531023 CAPN15O75808 1086 aa15.92■□□□□ 0.14
PSMA1-210ENST00000531023 SPINK5Q9NQ38 1064 aaPredicted RBP15.89■□□□□ 0.13
PSMA1-210ENST00000531023 APLP2Q06481 763 aa15.83■□□□□ 0.12
PSMA1-210ENST00000531023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.81■□□□□ 0.12
PSMA1-210ENST00000531023 HNRNPUL2Q1KMD3 747 aaKnown RBP15.81■□□□□ 0.12
PSMA1-210ENST00000531023 DSG3P32926 999 aa15.77■□□□□ 0.12
PSMA1-210ENST00000531023 SAMD1Q6SPF0 538 aaPredicted RBP15.7■□□□□ 0.1
PSMA1-210ENST00000531023 TRHP20396 242 aaPredicted RBP15.68■□□□□ 0.1
PSMA1-210ENST00000531023 ZNF219Q9P2Y4 722 aaPredicted RBP15.67■□□□□ 0.1
PSMA1-210ENST00000531023 SLC4A1APQ9BWU0 796 aaKnown RBP15.62■□□□□ 0.09
PSMA1-210ENST00000531023 MYCNP04198 464 aaPredicted RBP15.56■□□□□ 0.08
PSMA1-210ENST00000531023 ABCB7O75027 752 aa15.52■□□□□ 0.08
PSMA1-210ENST00000531023 FOXD4L1Q9NU39 408 aa15.42■□□□□ 0.06
PSMA1-210ENST00000531023 POLA2Q14181 598 aa15.25■□□□□ 0.03
PSMA1-210ENST00000531023 RBM42Q9BTD8 480 aaKnown RBP15.13■□□□□ 0.01
PSMA1-210ENST00000531023 ZBTB22O15209 634 aa15.12■□□□□ 0.01
PSMA1-210ENST00000531023 ATF5Q9Y2D1 282 aaPredicted RBP15.12■□□□□ 0.01
PSMA1-210ENST00000531023 POTEHQ6S545 545 aa15.05■□□□□ -0
PSMA1-210ENST00000531023 ZBTB12Q9Y330 459 aaPredicted RBP15.01□□□□□ -0.01
PSMA1-210ENST00000531023 ATXN8OSP0DMR3 200 aa14.97□□□□□ -0.01
PSMA1-210ENST00000531023 AKT1S1Q96B36 256 aa14.76□□□□□ -0.05
PSMA1-210ENST00000531023 OSCARQ8IYS5 282 aa14.74□□□□□ -0.05
PSMA1-210ENST00000531023 CHRDL2Q6WN34 429 aa14.73□□□□□ -0.05
PSMA1-210ENST00000531023 FBLN2P98095 1184 aa14.66□□□□□ -0.06
PSMA1-210ENST00000531023 REM2Q8IYK8 340 aaPredicted RBP14.6□□□□□ -0.07
PSMA1-210ENST00000531023 SPDYE2BA6NHP3 402 aa14.52□□□□□ -0.09
PSMA1-210ENST00000531023 SPDYE6P0CI01 402 aa14.52□□□□□ -0.09
PSMA1-210ENST00000531023 SPDYE2Q495Y8 402 aa14.52□□□□□ -0.09
PSMA1-210ENST00000531023 CSRNP3Q8WYN3 585 aa14.5□□□□□ -0.09
PSMA1-210ENST00000531023 MKRN4PQ13434 485 aaPredicted RBP14.43□□□□□ -0.1
PSMA1-210ENST00000531023 PITPNM1O00562 1244 aa14.42□□□□□ -0.1
PSMA1-210ENST00000531023 PIP4P2Q8N4L2 257 aa14.37□□□□□ -0.11
PSMA1-210ENST00000531023 EHMT2Q96KQ7 1210 aa14.37□□□□□ -0.11
PSMA1-210ENST00000531023 ZNF692Q9BU19 519 aaPredicted RBP14.35□□□□□ -0.11
PSMA1-210ENST00000531023 FXR2P51116 673 aaKnown RBP eCLIP14.3□□□□□ -0.12
PSMA1-210ENST00000531023 SSUH2Q9Y2M2 353 aa14.28□□□□□ -0.12
PSMA1-210ENST00000531023 SPDYE1Q8NFV5 336 aaPredicted RBP14.26□□□□□ -0.13
PSMA1-210ENST00000531023 CLEC11AQ9Y240 323 aa14.23□□□□□ -0.13
PSMA1-210ENST00000531023 HAX1O00165 279 aa14.16□□□□□ -0.14
PSMA1-210ENST00000531023 SP7Q8TDD2 431 aaPredicted RBP14.14□□□□□ -0.15
PSMA1-210ENST00000531023 PABPN1Q86U42 306 aaKnown RBP eCLIP14.12□□□□□ -0.15
PSMA1-210ENST00000531023 PRKAR2AP13861 404 aaKnown RBP14.08□□□□□ -0.16
PSMA1-210ENST00000531023 PRR29P0C7W0 189 aa14.02□□□□□ -0.17
PSMA1-210ENST00000531023 CHADLQ6NUI6 762 aa13.9□□□□□ -0.18
PSMA1-210ENST00000531023 EVX2Q03828 476 aa13.88□□□□□ -0.19
PSMA1-210ENST00000531023 SPDYE4A6NLX3 237 aa13.85□□□□□ -0.19
PSMA1-210ENST00000531023 C19orf67A6NJJ6 358 aa13.84□□□□□ -0.19
PSMA1-210ENST00000531023 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
PSMA1-210ENST00000531023 FARP1Q9Y4F1 1045 aaPredicted RBP13.73□□□□□ -0.21
PSMA1-210ENST00000531023 CD44P16070 742 aaKnown RBP13.64□□□□□ -0.23
PSMA1-210ENST00000531023 GABBR2O75899 941 aa13.63□□□□□ -0.23
PSMA1-210ENST00000531023 CREBZFQ9NS37 354 aa13.61□□□□□ -0.23
PSMA1-210ENST00000531023 CLCN6P51797 869 aa13.52□□□□□ -0.25
PSMA1-210ENST00000531023 NPM1P06748 294 aaKnown RBP eCLIP13.46□□□□□ -0.25
PSMA1-210ENST00000531023 PROM2Q8N271 834 aa13.46□□□□□ -0.25
PSMA1-210ENST00000531023 ZRANB1Q9UGI0 708 aa13.46□□□□□ -0.25
PSMA1-210ENST00000531023 PAK3O75914 559 aaPredicted RBP13.43□□□□□ -0.26
PSMA1-210ENST00000531023 ZNF579Q8NAF0 562 aaKnown RBP13.42□□□□□ -0.26
PSMA1-210ENST00000531023 MNX1P50219 401 aaPredicted RBP13.35□□□□□ -0.27
PSMA1-210ENST00000531023 DCBLD2Q96PD2 775 aa13.33□□□□□ -0.28
PSMA1-210ENST00000531023 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
PSMA1-210ENST00000531023 POTEIP0CG38 1075 aa13.28□□□□□ -0.28
PSMA1-210ENST00000531023 LHX8Q68G74 356 aa13.27□□□□□ -0.29
PSMA1-210ENST00000531023 PHF12Q96QT6 1004 aa13.24□□□□□ -0.29
PSMA1-210ENST00000531023 MIER1Q8N108 512 aa13.23□□□□□ -0.29
PSMA1-210ENST00000531023 GALR2O43603 387 aaPredicted RBP13.22□□□□□ -0.29
PSMA1-210ENST00000531023 FKBP8Q14318 412 aa13.19□□□□□ -0.3
PSMA1-210ENST00000531023 TSPYL2Q9H2G4 693 aaPredicted RBP13.16□□□□□ -0.3
PSMA1-210ENST00000531023 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.3
PSMA1-210ENST00000531023 ZBTB47Q9UFB7 747 aaPredicted RBP13.08□□□□□ -0.32
PSMA1-210ENST00000531023 MS4A3Q96HJ5 214 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms