RNA–Protein interactions for RNA: ENST00000530964.5

NUCB2-211, Transcript of nucleobindin 2, humanhuman

TSL 5

Gene NUCB2, Length 463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-211ENST00000530964 AEBP2Q6ZN18 517 aaPredicted RBP23.26■■□□□ 1.31
NUCB2-211ENST00000530964 CHIC1Q5VXU3 224 aa21.98■■□□□ 1.11
NUCB2-211ENST00000530964 SENP3Q9H4L4 574 aaPredicted RBP19.63■□□□□ 0.73
NUCB2-211ENST00000530964 PHF23Q9BUL5 403 aaPredicted RBP19.49■□□□□ 0.71
NUCB2-211ENST00000530964 FOXD1Q16676 465 aa18.44■□□□□ 0.54
NUCB2-211ENST00000530964 PLPPR3Q6T4P5 718 aa17.5■□□□□ 0.39
NUCB2-211ENST00000530964 PPP6R1Q9UPN7 881 aa17.35■□□□□ 0.37
NUCB2-211ENST00000530964 ADRA2BP18089 450 aa17.27■□□□□ 0.36
NUCB2-211ENST00000530964 PIAS4Q8N2W9 510 aaPredicted RBP17.19■□□□□ 0.34
NUCB2-211ENST00000530964 MSH5O43196 834 aa17.07■□□□□ 0.32
NUCB2-211ENST00000530964 POTEDQ86YR6 584 aa16.78■□□□□ 0.28
NUCB2-211ENST00000530964 MAPK8IP2Q13387 824 aaPredicted RBP15.89■□□□□ 0.13
NUCB2-211ENST00000530964 DMRT2Q9Y5R5 561 aa15.62■□□□□ 0.09
NUCB2-211ENST00000530964 SCAF1Q9H7N4 1312 aaKnown RBP15.55■□□□□ 0.08
NUCB2-211ENST00000530964 PPP4R3CPQ6ZMV5 832 aa15.44■□□□□ 0.06
NUCB2-211ENST00000530964 CNKSR2Q8WXI2 1034 aa15.06■□□□□ 0
NUCB2-211ENST00000530964 HOXD11P31277 338 aaPredicted RBP15.05■□□□□ -0
NUCB2-211ENST00000530964 DCAF8L1A6NGE4 600 aa15.03■□□□□ -0
NUCB2-211ENST00000530964 RNF216Q9NWF9 866 aaPredicted RBP14.91□□□□□ -0.02
NUCB2-211ENST00000530964 CACNB1Q02641 598 aaPredicted RBP14.72□□□□□ -0.05
NUCB2-211ENST00000530964 NCBP3Q53F19 620 aaKnown RBP14.71□□□□□ -0.05
NUCB2-211ENST00000530964 RNF39Q9H2S5 420 aa14.66□□□□□ -0.06
NUCB2-211ENST00000530964 NPM3O75607 178 aaKnown RBP14.65□□□□□ -0.06
NUCB2-211ENST00000530964 KCNA4P22459 653 aa14.45□□□□□ -0.1
NUCB2-211ENST00000530964 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
NUCB2-211ENST00000530964 C1QBPQ07021 282 aaKnown RBP14.36□□□□□ -0.11
NUCB2-211ENST00000530964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.34□□□□□ -0.111e-6■■□□□ 12.2
NUCB2-211ENST00000530964 U3KPZ7 1027 aaPredicted RBP14.11□□□□□ -0.15
NUCB2-211ENST00000530964 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
NUCB2-211ENST00000530964 SPINK5Q9NQ38 1064 aaPredicted RBP13.95□□□□□ -0.18
NUCB2-211ENST00000530964 CAPN15O75808 1086 aa13.83□□□□□ -0.2
NUCB2-211ENST00000530964 DSG3P32926 999 aa13.76□□□□□ -0.21
NUCB2-211ENST00000530964 TRHP20396 242 aaPredicted RBP13.65□□□□□ -0.22
NUCB2-211ENST00000530964 ABCB7O75027 752 aa13.6□□□□□ -0.23
NUCB2-211ENST00000530964 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
NUCB2-211ENST00000530964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.5□□□□□ -0.25
NUCB2-211ENST00000530964 HNRNPUL2Q1KMD3 747 aaKnown RBP13.5□□□□□ -0.25
NUCB2-211ENST00000530964 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
NUCB2-211ENST00000530964 ZNF219Q9P2Y4 722 aaPredicted RBP13.48□□□□□ -0.25
NUCB2-211ENST00000530964 MYCNP04198 464 aaPredicted RBP13.46□□□□□ -0.25
NUCB2-211ENST00000530964 APLP2Q06481 763 aa13.46□□□□□ -0.25
NUCB2-211ENST00000530964 FOXD4L1Q9NU39 408 aa13.35□□□□□ -0.27
NUCB2-211ENST00000530964 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
NUCB2-211ENST00000530964 ZBTB22O15209 634 aa13.34□□□□□ -0.27
NUCB2-211ENST00000530964 POLA2Q14181 598 aa13.29□□□□□ -0.28
NUCB2-211ENST00000530964 POTEHQ6S545 545 aa13.11□□□□□ -0.31
NUCB2-211ENST00000530964 RBM42Q9BTD8 480 aaKnown RBP12.97□□□□□ -0.33
NUCB2-211ENST00000530964 OSCARQ8IYS5 282 aa12.87□□□□□ -0.35
NUCB2-211ENST00000530964 ATXN8OSP0DMR3 200 aa12.86□□□□□ -0.35
NUCB2-211ENST00000530964 ZBTB12Q9Y330 459 aaPredicted RBP12.83□□□□□ -0.36
NUCB2-211ENST00000530964 CHRDL2Q6WN34 429 aa12.8□□□□□ -0.36
NUCB2-211ENST00000530964 AKT1S1Q96B36 256 aa12.75□□□□□ -0.37
NUCB2-211ENST00000530964 REM2Q8IYK8 340 aaPredicted RBP12.71□□□□□ -0.37
NUCB2-211ENST00000530964 CSRNP3Q8WYN3 585 aa12.7□□□□□ -0.38
NUCB2-211ENST00000530964 MKRN4PQ13434 485 aaPredicted RBP12.69□□□□□ -0.38
NUCB2-211ENST00000530964 PITPNM1O00562 1244 aa12.6□□□□□ -0.39
NUCB2-211ENST00000530964 FBLN2P98095 1184 aa12.6□□□□□ -0.39
NUCB2-211ENST00000530964 EHMT2Q96KQ7 1210 aa12.56□□□□□ -0.4
NUCB2-211ENST00000530964 PIP4P2Q8N4L2 257 aa12.55□□□□□ -0.4
NUCB2-211ENST00000530964 SPDYE2BA6NHP3 402 aa12.51□□□□□ -0.41
NUCB2-211ENST00000530964 SPDYE6P0CI01 402 aa12.51□□□□□ -0.41
NUCB2-211ENST00000530964 SPDYE2Q495Y8 402 aa12.51□□□□□ -0.41
NUCB2-211ENST00000530964 FXR2P51116 673 aaKnown RBP eCLIP12.44□□□□□ -0.42
NUCB2-211ENST00000530964 ZNF692Q9BU19 519 aaPredicted RBP12.42□□□□□ -0.42
NUCB2-211ENST00000530964 SSUH2Q9Y2M2 353 aa12.4□□□□□ -0.42
NUCB2-211ENST00000530964 CLEC11AQ9Y240 323 aa12.36□□□□□ -0.43
NUCB2-211ENST00000530964 SPDYE1Q8NFV5 336 aaPredicted RBP12.29□□□□□ -0.44
NUCB2-211ENST00000530964 HAX1O00165 279 aa12.28□□□□□ -0.44
NUCB2-211ENST00000530964 EVX2Q03828 476 aa12.28□□□□□ -0.44
NUCB2-211ENST00000530964 PABPN1Q86U42 306 aaKnown RBP eCLIP12.28□□□□□ -0.44
NUCB2-211ENST00000530964 SP7Q8TDD2 431 aaPredicted RBP12.28□□□□□ -0.44
NUCB2-211ENST00000530964 PRKAR2AP13861 404 aaKnown RBP12.25□□□□□ -0.45
NUCB2-211ENST00000530964 CHADLQ6NUI6 762 aa12.2□□□□□ -0.46
NUCB2-211ENST00000530964 PRR29P0C7W0 189 aa12.11□□□□□ -0.47
NUCB2-211ENST00000530964 C19orf67A6NJJ6 358 aa12.04□□□□□ -0.48
NUCB2-211ENST00000530964 SPDYE4A6NLX3 237 aa12.01□□□□□ -0.49
NUCB2-211ENST00000530964 FARP1Q9Y4F1 1045 aaPredicted RBP11.92□□□□□ -0.5
NUCB2-211ENST00000530964 GABBR2O75899 941 aa11.89□□□□□ -0.51
NUCB2-211ENST00000530964 CREBZFQ9NS37 354 aa11.89□□□□□ -0.51
NUCB2-211ENST00000530964 CD44P16070 742 aaKnown RBP11.84□□□□□ -0.51
NUCB2-211ENST00000530964 STAG3Q9UJ98 1225 aa11.79□□□□□ -0.52
NUCB2-211ENST00000530964 POTEIP0CG38 1075 aa11.71□□□□□ -0.53
NUCB2-211ENST00000530964 PROM2Q8N271 834 aa11.71□□□□□ -0.53
NUCB2-211ENST00000530964 MNX1P50219 401 aaPredicted RBP11.7□□□□□ -0.54
NUCB2-211ENST00000530964 ZRANB1Q9UGI0 708 aa11.7□□□□□ -0.54
NUCB2-211ENST00000530964 ZNF579Q8NAF0 562 aaKnown RBP11.63□□□□□ -0.55
NUCB2-211ENST00000530964 PHF12Q96QT6 1004 aa11.6□□□□□ -0.55
NUCB2-211ENST00000530964 GALR2O43603 387 aaPredicted RBP11.59□□□□□ -0.55
NUCB2-211ENST00000530964 LHX8Q68G74 356 aa11.54□□□□□ -0.56
NUCB2-211ENST00000530964 NPM1P06748 294 aaKnown RBP eCLIP11.52□□□□□ -0.57
NUCB2-211ENST00000530964 DCBLD2Q96PD2 775 aa11.5□□□□□ -0.57
NUCB2-211ENST00000530964 PAK3O75914 559 aaPredicted RBP11.48□□□□□ -0.57
NUCB2-211ENST00000530964 FKBP8Q14318 412 aa11.48□□□□□ -0.57
NUCB2-211ENST00000530964 CLCN6P51797 869 aa11.47□□□□□ -0.57
NUCB2-211ENST00000530964 TSPYL2Q9H2G4 693 aaPredicted RBP11.47□□□□□ -0.57
NUCB2-211ENST00000530964 MIER1Q8N108 512 aa11.46□□□□□ -0.57
NUCB2-211ENST00000530964 PELP1Q8IZL8 1130 aaKnown RBP11.41□□□□□ -0.58
NUCB2-211ENST00000530964 MS4A3Q96HJ5 214 aa11.41□□□□□ -0.58
NUCB2-211ENST00000530964 RASEFQ8IZ41 740 aa11.39□□□□□ -0.59
NUCB2-211ENST00000530964 CCDC61Q9Y6R9 512 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms