RNA–Protein interactions for RNA: ENST00000530921.1

ACER3-209, Transcript of alkaline ceramidase 3, humanhuman

TSL 2

Gene ACER3, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-209ENST00000530921 AEBP2Q6ZN18 517 aaPredicted RBP24.13■■□□□ 1.45
ACER3-209ENST00000530921 CHIC1Q5VXU3 224 aa22.91■■□□□ 1.26
ACER3-209ENST00000530921 SENP3Q9H4L4 574 aaPredicted RBP20.47■□□□□ 0.87
ACER3-209ENST00000530921 PHF23Q9BUL5 403 aaPredicted RBP20.25■□□□□ 0.83
ACER3-209ENST00000530921 FOXD1Q16676 465 aa19.14■□□□□ 0.65
ACER3-209ENST00000530921 PLPPR3Q6T4P5 718 aa18.29■□□□□ 0.52
ACER3-209ENST00000530921 PPP6R1Q9UPN7 881 aa17.98■□□□□ 0.47
ACER3-209ENST00000530921 ADRA2BP18089 450 aa17.9■□□□□ 0.46
ACER3-209ENST00000530921 PIAS4Q8N2W9 510 aaPredicted RBP17.85■□□□□ 0.45
ACER3-209ENST00000530921 MSH5O43196 834 aa17.8■□□□□ 0.44
ACER3-209ENST00000530921 POTEDQ86YR6 584 aa17.34■□□□□ 0.37
ACER3-209ENST00000530921 MAPK8IP2Q13387 824 aaPredicted RBP16.44■□□□□ 0.22
ACER3-209ENST00000530921 DMRT2Q9Y5R5 561 aa16.27■□□□□ 0.2
ACER3-209ENST00000530921 SCAF1Q9H7N4 1312 aaKnown RBP16.26■□□□□ 0.19
ACER3-209ENST00000530921 PPP4R3CPQ6ZMV5 832 aa16.07■□□□□ 0.16
ACER3-209ENST00000530921 CNKSR2Q8WXI2 1034 aa15.73■□□□□ 0.11
ACER3-209ENST00000530921 HOXD11P31277 338 aaPredicted RBP15.7■□□□□ 0.1
ACER3-209ENST00000530921 RNF216Q9NWF9 866 aaPredicted RBP15.58■□□□□ 0.08
ACER3-209ENST00000530921 DCAF8L1A6NGE4 600 aa15.57■□□□□ 0.08
ACER3-209ENST00000530921 NCBP3Q53F19 620 aaKnown RBP15.41■□□□□ 0.06
ACER3-209ENST00000530921 NPM3O75607 178 aaKnown RBP15.27■□□□□ 0.04
ACER3-209ENST00000530921 CACNB1Q02641 598 aaPredicted RBP15.25■□□□□ 0.03
ACER3-209ENST00000530921 RNF39Q9H2S5 420 aa15.25■□□□□ 0.03
ACER3-209ENST00000530921 DNAJC5BQ9UF47 199 aa15.1■□□□□ 0.01
ACER3-209ENST00000530921 KCNA4P22459 653 aa15.05■□□□□ -0
ACER3-209ENST00000530921 C1QBPQ07021 282 aaKnown RBP14.98□□□□□ -0.01
ACER3-209ENST00000530921 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.92□□□□□ -0.02
ACER3-209ENST00000530921 U3KPZ7 1027 aaPredicted RBP14.68□□□□□ -0.06
ACER3-209ENST00000530921 SLC4A2P04920 1241 aa14.6□□□□□ -0.07
ACER3-209ENST00000530921 SPINK5Q9NQ38 1064 aaPredicted RBP14.46□□□□□ -0.09
ACER3-209ENST00000530921 CAPN15O75808 1086 aa14.37□□□□□ -0.11
ACER3-209ENST00000530921 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
ACER3-209ENST00000530921 DSG3P32926 999 aa14.3□□□□□ -0.12
ACER3-209ENST00000530921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.17□□□□□ -0.14
ACER3-209ENST00000530921 HNRNPUL2Q1KMD3 747 aaKnown RBP14.17□□□□□ -0.14
ACER3-209ENST00000530921 TRHP20396 242 aaPredicted RBP14.16□□□□□ -0.14
ACER3-209ENST00000530921 APLP2Q06481 763 aa14.14□□□□□ -0.15
ACER3-209ENST00000530921 SAMD1Q6SPF0 538 aaPredicted RBP14.12□□□□□ -0.15
ACER3-209ENST00000530921 ZNF219Q9P2Y4 722 aaPredicted RBP14.11□□□□□ -0.15
ACER3-209ENST00000530921 EHMT2Q96KQ7 1210 aa14.1□□□□□ -0.15
ACER3-209ENST00000530921 ABCB7O75027 752 aa14.08□□□□□ -0.16
ACER3-209ENST00000530921 MYCNP04198 464 aaPredicted RBP14.08□□□□□ -0.16
ACER3-209ENST00000530921 FOXD4L1Q9NU39 408 aa13.97□□□□□ -0.17
ACER3-209ENST00000530921 ZBTB22O15209 634 aa13.89□□□□□ -0.19
ACER3-209ENST00000530921 ATF5Q9Y2D1 282 aaPredicted RBP13.84□□□□□ -0.19
ACER3-209ENST00000530921 POLA2Q14181 598 aa13.81□□□□□ -0.2
ACER3-209ENST00000530921 CSRNP3Q8WYN3 585 aa13.8□□□□□ -0.2
ACER3-209ENST00000530921 POTEHQ6S545 545 aa13.58□□□□□ -0.24
ACER3-209ENST00000530921 RBM42Q9BTD8 480 aaKnown RBP13.57□□□□□ -0.24
ACER3-209ENST00000530921 ATXN8OSP0DMR3 200 aa13.52□□□□□ -0.25
ACER3-209ENST00000530921 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
ACER3-209ENST00000530921 OSCARQ8IYS5 282 aa13.38□□□□□ -0.27
ACER3-209ENST00000530921 CHRDL2Q6WN34 429 aa13.3□□□□□ -0.28
ACER3-209ENST00000530921 AKT1S1Q96B36 256 aa13.3□□□□□ -0.28
ACER3-209ENST00000530921 REM2Q8IYK8 340 aaPredicted RBP13.21□□□□□ -0.29
ACER3-209ENST00000530921 MKRN4PQ13434 485 aaPredicted RBP13.2□□□□□ -0.3
ACER3-209ENST00000530921 FBLN2P98095 1184 aa13.17□□□□□ -0.3
ACER3-209ENST00000530921 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
ACER3-209ENST00000530921 PITPNM1O00562 1244 aa13.09□□□□□ -0.31
ACER3-209ENST00000530921 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
ACER3-209ENST00000530921 SPDYE2Q495Y8 402 aa13.09□□□□□ -0.31
ACER3-209ENST00000530921 PIP4P2Q8N4L2 257 aa13.03□□□□□ -0.32
ACER3-209ENST00000530921 SSUH2Q9Y2M2 353 aa12.96□□□□□ -0.33
ACER3-209ENST00000530921 FXR2P51116 673 aaKnown RBP eCLIP12.95□□□□□ -0.34
ACER3-209ENST00000530921 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
ACER3-209ENST00000530921 SPDYE1Q8NFV5 336 aaPredicted RBP12.83□□□□□ -0.36
ACER3-209ENST00000530921 CLEC11AQ9Y240 323 aa12.82□□□□□ -0.36
ACER3-209ENST00000530921 PABPN1Q86U42 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
ACER3-209ENST00000530921 SP7Q8TDD2 431 aaPredicted RBP12.75□□□□□ -0.37
ACER3-209ENST00000530921 HAX1O00165 279 aa12.73□□□□□ -0.37
ACER3-209ENST00000530921 PRKAR2AP13861 404 aaKnown RBP12.72□□□□□ -0.37
ACER3-209ENST00000530921 EVX2Q03828 476 aa12.67□□□□□ -0.38
ACER3-209ENST00000530921 CHADLQ6NUI6 762 aa12.63□□□□□ -0.39
ACER3-209ENST00000530921 PRR29P0C7W0 189 aa12.61□□□□□ -0.39
ACER3-209ENST00000530921 SPDYE4A6NLX3 237 aa12.54□□□□□ -0.4
ACER3-209ENST00000530921 FKBP8Q14318 412 aa12.54□□□□□ -0.4
ACER3-209ENST00000530921 C19orf67A6NJJ6 358 aa12.53□□□□□ -0.4
ACER3-209ENST00000530921 FARP1Q9Y4F1 1045 aaPredicted RBP12.42□□□□□ -0.42
ACER3-209ENST00000530921 STAG3Q9UJ98 1225 aa12.38□□□□□ -0.43
ACER3-209ENST00000530921 CREBZFQ9NS37 354 aa12.37□□□□□ -0.43
ACER3-209ENST00000530921 GABBR2O75899 941 aa12.33□□□□□ -0.44
ACER3-209ENST00000530921 CD44P16070 742 aaKnown RBP12.32□□□□□ -0.44
ACER3-209ENST00000530921 PROM2Q8N271 834 aa12.29□□□□□ -0.44
ACER3-209ENST00000530921 MNX1P50219 401 aaPredicted RBP12.19□□□□□ -0.46
ACER3-209ENST00000530921 ZRANB1Q9UGI0 708 aa12.15□□□□□ -0.46
ACER3-209ENST00000530921 ZNF579Q8NAF0 562 aaKnown RBP12.14□□□□□ -0.47
ACER3-209ENST00000530921 POTEIP0CG38 1075 aa12.12□□□□□ -0.47
ACER3-209ENST00000530921 FBXO3Q9UK99 471 aa12.07□□□□□ -0.48
ACER3-209ENST00000530921 NPM1P06748 294 aaKnown RBP eCLIP12.06□□□□□ -0.48
ACER3-209ENST00000530921 CLCN6P51797 869 aa12.05□□□□□ -0.48
ACER3-209ENST00000530921 PHF12Q96QT6 1004 aa12.03□□□□□ -0.48
ACER3-209ENST00000530921 GALR2O43603 387 aaPredicted RBP12.01□□□□□ -0.49
ACER3-209ENST00000530921 PAK3O75914 559 aaPredicted RBP12□□□□□ -0.49
ACER3-209ENST00000530921 DCBLD2Q96PD2 775 aa11.96□□□□□ -0.49
ACER3-209ENST00000530921 LHX8Q68G74 356 aa11.95□□□□□ -0.5
ACER3-209ENST00000530921 MIER1Q8N108 512 aa11.94□□□□□ -0.5
ACER3-209ENST00000530921 TSPYL2Q9H2G4 693 aaPredicted RBP11.9□□□□□ -0.5
ACER3-209ENST00000530921 VASPP50552 380 aaPredicted RBP11.86□□□□□ -0.51
ACER3-209ENST00000530921 MS4A3Q96HJ5 214 aa11.86□□□□□ -0.51
ACER3-209ENST00000530921 CCDC61Q9Y6R9 512 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms