RNA–Protein interactions for RNA: ENST00000529418.1

AP003049.1-201, humanhuman

BASIC

Gene AP003049.1, Length 457 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003049.1-201ENST00000529418 AEBP2Q6ZN18 517 aaPredicted RBP28.22■■■□□ 2.11
AP003049.1-201ENST00000529418 CHIC1Q5VXU3 224 aa27.73■■■□□ 2.03
AP003049.1-201ENST00000529418 PHF23Q9BUL5 403 aaPredicted RBP24.45■■□□□ 1.5
AP003049.1-201ENST00000529418 SENP3Q9H4L4 574 aaPredicted RBP23.85■■□□□ 1.41
AP003049.1-201ENST00000529418 PLPPR3Q6T4P5 718 aa22.6■■□□□ 1.21
AP003049.1-201ENST00000529418 FOXD1Q16676 465 aa22.16■■□□□ 1.14
AP003049.1-201ENST00000529418 PPP6R1Q9UPN7 881 aa21.52■■□□□ 1.04
AP003049.1-201ENST00000529418 ADRA2BP18089 450 aa21.51■■□□□ 1.03
AP003049.1-201ENST00000529418 PIAS4Q8N2W9 510 aaPredicted RBP20.92■□□□□ 0.94
AP003049.1-201ENST00000529418 MSH5O43196 834 aa20.29■□□□□ 0.84
AP003049.1-201ENST00000529418 PPP4R3CPQ6ZMV5 832 aa19.97■□□□□ 0.79
AP003049.1-201ENST00000529418 KCNA4P22459 653 aa19.76■□□□□ 0.75
AP003049.1-201ENST00000529418 SCAF1Q9H7N4 1312 aaKnown RBP19.62■□□□□ 0.73
AP003049.1-201ENST00000529418 NCBP3Q53F19 620 aaKnown RBP19.48■□□□□ 0.71
AP003049.1-201ENST00000529418 MAPK8IP2Q13387 824 aaPredicted RBP19.47■□□□□ 0.71
AP003049.1-201ENST00000529418 CNKSR2Q8WXI2 1034 aa19.34■□□□□ 0.69
AP003049.1-201ENST00000529418 NPM3O75607 178 aaKnown RBP19.22■□□□□ 0.67
AP003049.1-201ENST00000529418 DMRT2Q9Y5R5 561 aa19.09■□□□□ 0.65
AP003049.1-201ENST00000529418 RNF216Q9NWF9 866 aaPredicted RBP18.9■□□□□ 0.62
AP003049.1-201ENST00000529418 SLC4A1APQ9BWU0 796 aaKnown RBP18.84■□□□□ 0.61
AP003049.1-201ENST00000529418 HOXD11P31277 338 aaPredicted RBP18.78■□□□□ 0.6
AP003049.1-201ENST00000529418 DNAJC5BQ9UF47 199 aa18.59■□□□□ 0.57
AP003049.1-201ENST00000529418 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
AP003049.1-201ENST00000529418 DCAF8L1A6NGE4 600 aa18.27■□□□□ 0.52
AP003049.1-201ENST00000529418 CSRNP3Q8WYN3 585 aa18.27■□□□□ 0.52
AP003049.1-201ENST00000529418 ZBTB22O15209 634 aa18.19■□□□□ 0.5
AP003049.1-201ENST00000529418 POTEDQ86YR6 584 aa18.15■□□□□ 0.5
AP003049.1-201ENST00000529418 SLC4A2P04920 1241 aa18.12■□□□□ 0.49
AP003049.1-201ENST00000529418 FOXD4L1Q9NU39 408 aa18.09■□□□□ 0.49
AP003049.1-201ENST00000529418 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.91■□□□□ 0.46
AP003049.1-201ENST00000529418 MYCNP04198 464 aaPredicted RBP17.72■□□□□ 0.43
AP003049.1-201ENST00000529418 U3KPZ7 1027 aaPredicted RBP17.64■□□□□ 0.41
AP003049.1-201ENST00000529418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.44■□□□□ 0.38
AP003049.1-201ENST00000529418 HNRNPUL2Q1KMD3 747 aaKnown RBP17.44■□□□□ 0.38
AP003049.1-201ENST00000529418 RNF39Q9H2S5 420 aa17.44■□□□□ 0.38
AP003049.1-201ENST00000529418 ATXN8OSP0DMR3 200 aa17.43■□□□□ 0.38
AP003049.1-201ENST00000529418 SAMD1Q6SPF0 538 aaPredicted RBP17.41■□□□□ 0.38
AP003049.1-201ENST00000529418 ATF5Q9Y2D1 282 aaPredicted RBP17.3■□□□□ 0.36
AP003049.1-201ENST00000529418 C1QBPQ07021 282 aaKnown RBP17.23■□□□□ 0.35
AP003049.1-201ENST00000529418 APLP2Q06481 763 aa17.21■□□□□ 0.35
AP003049.1-201ENST00000529418 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
AP003049.1-201ENST00000529418 CAPN15O75808 1086 aa17.01■□□□□ 0.31
AP003049.1-201ENST00000529418 TRHP20396 242 aaPredicted RBP16.99■□□□□ 0.31
AP003049.1-201ENST00000529418 ZNF219Q9P2Y4 722 aaPredicted RBP16.99■□□□□ 0.31
AP003049.1-201ENST00000529418 CACNB1Q02641 598 aaPredicted RBP16.84■□□□□ 0.29
AP003049.1-201ENST00000529418 POLA2Q14181 598 aa16.77■□□□□ 0.28
AP003049.1-201ENST00000529418 ABCB7O75027 752 aa16.72■□□□□ 0.27
AP003049.1-201ENST00000529418 DSG3P32926 999 aa16.68■□□□□ 0.26
AP003049.1-201ENST00000529418 MKRN4PQ13434 485 aaPredicted RBP16.54■□□□□ 0.24
AP003049.1-201ENST00000529418 FBLN2P98095 1184 aa16.5■□□□□ 0.23
AP003049.1-201ENST00000529418 FKBP8Q14318 412 aa16.48■□□□□ 0.23
AP003049.1-201ENST00000529418 ZBTB12Q9Y330 459 aaPredicted RBP16.44■□□□□ 0.22
AP003049.1-201ENST00000529418 SPDYE4A6NLX3 237 aa16.25■□□□□ 0.19
AP003049.1-201ENST00000529418 OSCARQ8IYS5 282 aa16.17■□□□□ 0.18
AP003049.1-201ENST00000529418 SPDYE2BA6NHP3 402 aa16.05■□□□□ 0.16
AP003049.1-201ENST00000529418 SPDYE6P0CI01 402 aa16.05■□□□□ 0.16
AP003049.1-201ENST00000529418 SPDYE2Q495Y8 402 aa16.05■□□□□ 0.16
AP003049.1-201ENST00000529418 ZNF692Q9BU19 519 aaPredicted RBP16.05■□□□□ 0.16
AP003049.1-201ENST00000529418 PROM2Q8N271 834 aa16.01■□□□□ 0.15
AP003049.1-201ENST00000529418 SSUH2Q9Y2M2 353 aa15.95■□□□□ 0.14
AP003049.1-201ENST00000529418 PABPN1Q86U42 306 aaKnown RBP eCLIP15.84■□□□□ 0.13
AP003049.1-201ENST00000529418 RBM42Q9BTD8 480 aaKnown RBP15.84■□□□□ 0.13
AP003049.1-201ENST00000529418 FBXO3Q9UK99 471 aa15.81■□□□□ 0.12
AP003049.1-201ENST00000529418 AKT1S1Q96B36 256 aa15.72■□□□□ 0.11
AP003049.1-201ENST00000529418 VASPP50552 380 aaPredicted RBP15.6■□□□□ 0.09
AP003049.1-201ENST00000529418 STAG3Q9UJ98 1225 aa15.6■□□□□ 0.09
AP003049.1-201ENST00000529418 REM2Q8IYK8 340 aaPredicted RBP15.59■□□□□ 0.09
AP003049.1-201ENST00000529418 SPDYE1Q8NFV5 336 aaPredicted RBP15.52■□□□□ 0.08
AP003049.1-201ENST00000529418 CLEC11AQ9Y240 323 aa15.47■□□□□ 0.07
AP003049.1-201ENST00000529418 IFNLR1Q8IU57 520 aaPredicted RBP15.43■□□□□ 0.06
AP003049.1-201ENST00000529418 MIER1Q8N108 512 aa15.41■□□□□ 0.06
AP003049.1-201ENST00000529418 PITPNM1O00562 1244 aa15.4■□□□□ 0.06
AP003049.1-201ENST00000529418 PLCD3Q8N3E9 789 aa15.39■□□□□ 0.05
AP003049.1-201ENST00000529418 PRR29P0C7W0 189 aa15.36■□□□□ 0.05
AP003049.1-201ENST00000529418 AMER1Q5JTC6 1135 aaPredicted RBP15.36■□□□□ 0.05
AP003049.1-201ENST00000529418 RTN4Q9NQC3 1192 aaKnown RBP15.36■□□□□ 0.05
AP003049.1-201ENST00000529418 KLHL34Q8N239 644 aa15.31■□□□□ 0.04
AP003049.1-201ENST00000529418 PLEKHG5O94827 1062 aa15.26■□□□□ 0.03
AP003049.1-201ENST00000529418 CREBZFQ9NS37 354 aa15.22■□□□□ 0.03
AP003049.1-201ENST00000529418 SPOCK2Q92563 424 aa15.2■□□□□ 0.02
AP003049.1-201ENST00000529418 ZBTB47Q9UFB7 747 aaPredicted RBP15.16■□□□□ 0.02
AP003049.1-201ENST00000529418 CHRDL2Q6WN34 429 aa15.13■□□□□ 0.01
AP003049.1-201ENST00000529418 MNX1P50219 401 aaPredicted RBP15.09■□□□□ 0.01
AP003049.1-201ENST00000529418 CHADLQ6NUI6 762 aa15.09■□□□□ 0.01
AP003049.1-201ENST00000529418 FXR2P51116 673 aaKnown RBP eCLIP15.07■□□□□ 0
AP003049.1-201ENST00000529418 PRKAR2AP13861 404 aaKnown RBP15.02■□□□□ -0
AP003049.1-201ENST00000529418 PKD2Q13563 968 aa15□□□□□ -0.01
AP003049.1-201ENST00000529418 PIP4P2Q8N4L2 257 aa15□□□□□ -0.01
AP003049.1-201ENST00000529418 NUBP1P53384 320 aa14.99□□□□□ -0.01
AP003049.1-201ENST00000529418 NPM1P06748 294 aaKnown RBP eCLIP14.95□□□□□ -0.02
AP003049.1-201ENST00000529418 FARP1Q9Y4F1 1045 aaPredicted RBP14.95□□□□□ -0.02
AP003049.1-201ENST00000529418 CIZ1Q9ULV3 898 aaPredicted RBP14.94□□□□□ -0.02
AP003049.1-201ENST00000529418 DCAF8Q5TAQ9 597 aa14.88□□□□□ -0.03
AP003049.1-201ENST00000529418 RASEFQ8IZ41 740 aa14.87□□□□□ -0.03
AP003049.1-201ENST00000529418 ECM2O94769 699 aaPredicted RBP14.85□□□□□ -0.03
AP003049.1-201ENST00000529418 GSE1Q14687 1217 aa14.85□□□□□ -0.03
AP003049.1-201ENST00000529418 FAM212AQ96EL1 285 aa14.82□□□□□ -0.04
AP003049.1-201ENST00000529418 TRIM41Q8WV44 630 aa14.75□□□□□ -0.05
AP003049.1-201ENST00000529418 TSPYL2Q9H2G4 693 aaPredicted RBP14.74□□□□□ -0.05
AP003049.1-201ENST00000529418 RGL2O15211 777 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms