RNA–Protein interactions for RNA: ENST00000528987.1

CD59-211, Transcript of CD59 molecule (CD59 blood group), humanhuman

TSL 1 (best)

Gene CD59, Length 3,716 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD59-211ENST00000528987 CHIC1Q5VXU3 224 aa12.76□□□□□ -0.37
CD59-211ENST00000528987 AEBP2Q6ZN18 517 aaPredicted RBP12.2□□□□□ -0.46
CD59-211ENST00000528987 EHMT2Q96KQ7 1210 aa12□□□□□ -0.49
CD59-211ENST00000528987 SLC24A1O60721 1099 aa11.87□□□□□ -0.51
CD59-211ENST00000528987 PHF23Q9BUL5 403 aaPredicted RBP11.49□□□□□ -0.57
CD59-211ENST00000528987 PLPPR3Q6T4P5 718 aa11.27□□□□□ -0.6
CD59-211ENST00000528987 RTN4Q9NQC3 1192 aaKnown RBP11.1□□□□□ -0.63
CD59-211ENST00000528987 KCNA4P22459 653 aa11.03□□□□□ -0.64
CD59-211ENST00000528987 CSRNP3Q8WYN3 585 aa10.92□□□□□ -0.66
CD59-211ENST00000528987 AMER1Q5JTC6 1135 aaPredicted RBP10.73□□□□□ -0.69
CD59-211ENST00000528987 SLC4A1APQ9BWU0 796 aaKnown RBP10.63□□□□□ -0.71
CD59-211ENST00000528987 PRKCSHP14314 528 aaPredicted RBP10.56□□□□□ -0.72
CD59-211ENST00000528987 ADRA2BP18089 450 aa10.5□□□□□ -0.73
CD59-211ENST00000528987 NCBP3Q53F19 620 aaKnown RBP10.48□□□□□ -0.73
CD59-211ENST00000528987 DAXXQ9UER7 740 aaPredicted RBP10.33□□□□□ -0.76
CD59-211ENST00000528987 ZBTB22O15209 634 aa10.12□□□□□ -0.79
CD59-211ENST00000528987 TAOK2Q9UL54 1235 aa10.1□□□□□ -0.79
CD59-211ENST00000528987 TPRNQ4KMQ1 711 aa10.1□□□□□ -0.79
CD59-211ENST00000528987 TIMELESSQ9UNS1 1208 aa10.09□□□□□ -0.79
CD59-211ENST00000528987 TULP1O00294 542 aaPredicted RBP10.09□□□□□ -0.79
CD59-211ENST00000528987 HAP1P54257 671 aaPredicted RBP10.08□□□□□ -0.8
CD59-211ENST00000528987 BCANQ96GW7 911 aa10.03□□□□□ -0.8
CD59-211ENST00000528987 FKBP8Q14318 412 aa9.99□□□□□ -0.81
CD59-211ENST00000528987 SENP3Q9H4L4 574 aaPredicted RBP9.98□□□□□ -0.81
CD59-211ENST00000528987 NISCHQ9Y2I1 1504 aa9.97□□□□□ -0.81
CD59-211ENST00000528987 DCAF8L2P0C7V8 631 aa9.95□□□□□ -0.82
CD59-211ENST00000528987 PPP6R1Q9UPN7 881 aa9.95□□□□□ -0.82
CD59-211ENST00000528987 PLCB2Q00722 1185 aa9.94□□□□□ -0.82
CD59-211ENST00000528987 NPM3O75607 178 aaKnown RBP9.89□□□□□ -0.83
CD59-211ENST00000528987 ARXQ96QS3 562 aa9.88□□□□□ -0.83
CD59-211ENST00000528987 PPP4R3CPQ6ZMV5 832 aa9.84□□□□□ -0.83
CD59-211ENST00000528987 RANGAP1P46060 587 aaPredicted RBP9.82□□□□□ -0.84
CD59-211ENST00000528987 HOMEZQ8IX15 550 aa9.75□□□□□ -0.85
CD59-211ENST00000528987 GTF3C3Q9Y5Q9 886 aa9.7□□□□□ -0.86
CD59-211ENST00000528987 PODXL2Q9NZ53 605 aa9.7□□□□□ -0.86
CD59-211ENST00000528987 FOXD4L1Q9NU39 408 aa9.62□□□□□ -0.87
CD59-211ENST00000528987 FBLN2P98095 1184 aa9.57□□□□□ -0.88
CD59-211ENST00000528987 C14orf37Q86TY3 774 aa9.57□□□□□ -0.88
CD59-211ENST00000528987 KDM2AQ9Y2K7 1162 aa9.53□□□□□ -0.88
CD59-211ENST00000528987 VSIG10Q8N0Z9 540 aa9.52□□□□□ -0.89
CD59-211ENST00000528987 SUPT5HO00267 1087 aaKnown RBP9.51□□□□□ -0.89
CD59-211ENST00000528987 KLHL34Q8N239 644 aa9.51□□□□□ -0.89
CD59-211ENST00000528987 CFAP44Q96MT7 982 aa9.45□□□□□ -0.9
CD59-211ENST00000528987 TMEM132AQ24JP5 1023 aa9.42□□□□□ -0.9
CD59-211ENST00000528987 PAXIP1Q6ZW49 1069 aaPredicted RBP9.38□□□□□ -0.91
CD59-211ENST00000528987 NPM2Q86SE8 214 aaKnown RBP9.36□□□□□ -0.91
CD59-211ENST00000528987 NBR1Q14596 966 aa9.34□□□□□ -0.91
CD59-211ENST00000528987 ERICH6Q7L0X2 663 aa9.33□□□□□ -0.92
CD59-211ENST00000528987 PELP1Q8IZL8 1130 aaKnown RBP9.31□□□□□ -0.92
CD59-211ENST00000528987 FOXD1Q16676 465 aa9.31□□□□□ -0.92
CD59-211ENST00000528987 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.28□□□□□ -0.92
CD59-211ENST00000528987 APLP2Q06481 763 aa9.25□□□□□ -0.93
CD59-211ENST00000528987 TRIM26Q12899 539 aaPredicted RBP9.24□□□□□ -0.93
CD59-211ENST00000528987 TSHZ2Q9NRE2 1034 aa9.24□□□□□ -0.93
CD59-211ENST00000528987 UBTFP17480 764 aaKnown RBP9.23□□□□□ -0.93
CD59-211ENST00000528987 PIAS4Q8N2W9 510 aaPredicted RBP9.18□□□□□ -0.94
CD59-211ENST00000528987 CNKSR2Q8WXI2 1034 aa9.16□□□□□ -0.94
CD59-211ENST00000528987 ARID3AQ99856 593 aa9.14□□□□□ -0.95
CD59-211ENST00000528987 TTBK1Q5TCY1 1321 aaPredicted RBP9.1□□□□□ -0.95
CD59-211ENST00000528987 NPM1P06748 294 aaKnown RBP eCLIP9.08□□□□□ -0.96
CD59-211ENST00000528987 MYT1Q01538 1121 aa9.07□□□□□ -0.96
CD59-211ENST00000528987 PKD2Q13563 968 aa9.07□□□□□ -0.96
CD59-211ENST00000528987 EIF5BO60841 1220 aaKnown RBP9.05□□□□□ -0.96
CD59-211ENST00000528987 SPRYD3Q8NCJ5 442 aa9.03□□□□□ -0.96
CD59-211ENST00000528987 BBXQ8WY36 941 aaPredicted RBP9.03□□□□□ -0.96
CD59-211ENST00000528987 HRCP23327 699 aa9.02□□□□□ -0.97
CD59-211ENST00000528987 VASPP50552 380 aaPredicted RBP8.99□□□□□ -0.97
CD59-211ENST00000528987 IFNLR1Q8IU57 520 aaPredicted RBP8.99□□□□□ -0.97
CD59-211ENST00000528987 FBXO3Q9UK99 471 aa8.99□□□□□ -0.97
CD59-211ENST00000528987 ABCC9O60706 1549 aa8.95□□□□□ -0.98
CD59-211ENST00000528987 ECM2O94769 699 aaPredicted RBP8.94□□□□□ -0.98
CD59-211ENST00000528987 SLC4A2P04920 1241 aa8.93□□□□□ -0.98
CD59-211ENST00000528987 TRHP20396 242 aaPredicted RBP8.9□□□□□ -0.99
CD59-211ENST00000528987 CHGAP10645 457 aaKnown RBP8.89□□□□□ -0.99
CD59-211ENST00000528987 LOC105371045A0A1W2PR82 267 aa8.88□□□□□ -0.99
CD59-211ENST00000528987 MYCNP04198 464 aaPredicted RBP8.88□□□□□ -0.99
CD59-211ENST00000528987 ATXN8OSP0DMR3 200 aa8.86□□□□□ -0.99
CD59-211ENST00000528987 MAPK8IP2Q13387 824 aaPredicted RBP8.86□□□□□ -0.99
CD59-211ENST00000528987 SCAF1Q9H7N4 1312 aaKnown RBP8.85□□□□□ -0.99
CD59-211ENST00000528987 RGL2O15211 777 aa8.83□□□□□ -1
CD59-211ENST00000528987 NEUROD2Q15784 382 aa8.82□□□□□ -1
CD59-211ENST00000528987 ATF5Q9Y2D1 282 aaPredicted RBP8.81□□□□□ -1
CD59-211ENST00000528987 CCDC180Q9P1Z9 1646 aa8.78□□□□□ -1
CD59-211ENST00000528987 CCDC9Q9Y3X0 531 aaKnown RBP8.78□□□□□ -1
CD59-211ENST00000528987 BRPF1P55201 1214 aaPredicted RBP8.78□□□□□ -1
CD59-211ENST00000528987 SPDYE4A6NLX3 237 aa8.76□□□□□ -1.01
CD59-211ENST00000528987 ARID3CA6NKF2 412 aa8.75□□□□□ -1.01
CD59-211ENST00000528987 ZBTB7CA1YPR0 619 aa8.75□□□□□ -1.01
CD59-211ENST00000528987 PLEKHG5O94827 1062 aa8.74□□□□□ -1.01
CD59-211ENST00000528987 TRIM41Q8WV44 630 aa8.67□□□□□ -1.02
CD59-211ENST00000528987 IGSF3O75054 1194 aa8.67□□□□□ -1.02
CD59-211ENST00000528987 PDIA4P13667 645 aaKnown RBP8.67□□□□□ -1.02
CD59-211ENST00000528987 CDK11BP21127 795 aaKnown RBP8.67□□□□□ -1.02
CD59-211ENST00000528987 CDK11AQ9UQ88 783 aaPredicted RBP8.67□□□□□ -1.02
CD59-211ENST00000528987 LMOD2Q6P5Q4 547 aa8.65□□□□□ -1.02
CD59-211ENST00000528987 RNF216Q9NWF9 866 aaPredicted RBP8.64□□□□□ -1.03
CD59-211ENST00000528987 RSPH6AQ9H0K4 717 aa8.64□□□□□ -1.03
CD59-211ENST00000528987 NECTIN2Q92692 538 aa8.63□□□□□ -1.03
CD59-211ENST00000528987 CIZ1Q9ULV3 898 aaPredicted RBP8.62□□□□□ -1.03
CD59-211ENST00000528987 C1orf115Q9H7X2 142 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms