RNA–Protein interactions for RNA: ENST00000528763.1

EIF3F-203, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

TSL 2

Gene EIF3F, Length 609 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-203ENST00000528763 CHIC1Q5VXU3 224 aa12.74□□□□□ -0.37
EIF3F-203ENST00000528763 AEBP2Q6ZN18 517 aaPredicted RBP12.36□□□□□ -0.43
EIF3F-203ENST00000528763 PHF23Q9BUL5 403 aaPredicted RBP11.37□□□□□ -0.59
EIF3F-203ENST00000528763 NISCHQ9Y2I1 1504 aa10.97□□□□□ -0.65
EIF3F-203ENST00000528763 PLPPR3Q6T4P5 718 aa10.63□□□□□ -0.71
EIF3F-203ENST00000528763 EHMT2Q96KQ7 1210 aa10.46□□□□□ -0.73
EIF3F-203ENST00000528763 KCNA4P22459 653 aa10.22□□□□□ -0.77
EIF3F-203ENST00000528763 SENP3Q9H4L4 574 aaPredicted RBP10.2□□□□□ -0.78
EIF3F-203ENST00000528763 ADRA2BP18089 450 aa10.07□□□□□ -0.8
EIF3F-203ENST00000528763 CSRNP3Q8WYN3 585 aa10.02□□□□□ -0.81
EIF3F-203ENST00000528763 SLC24A1O60721 1099 aa9.87□□□□□ -0.83
EIF3F-203ENST00000528763 SLC4A1APQ9BWU0 796 aaKnown RBP9.81□□□□□ -0.84
EIF3F-203ENST00000528763 PPP6R1Q9UPN7 881 aa9.8□□□□□ -0.84
EIF3F-203ENST00000528763 CCDC180Q9P1Z9 1646 aa9.73□□□□□ -0.85
EIF3F-203ENST00000528763 RTN4Q9NQC3 1192 aaKnown RBP9.57□□□□□ -0.88
EIF3F-203ENST00000528763 PPP4R3CPQ6ZMV5 832 aa9.52□□□□□ -0.89
EIF3F-203ENST00000528763 FOXD1Q16676 465 aa9.49□□□□□ -0.89
EIF3F-203ENST00000528763 ZBTB22O15209 634 aa9.46□□□□□ -0.9
EIF3F-203ENST00000528763 AMER1Q5JTC6 1135 aaPredicted RBP9.45□□□□□ -0.9
EIF3F-203ENST00000528763 NCBP3Q53F19 620 aaKnown RBP9.39□□□□□ -0.91
EIF3F-203ENST00000528763 NPM3O75607 178 aaKnown RBP9.37□□□□□ -0.91
EIF3F-203ENST00000528763 ZCCHC6Q5VYS8 1495 aaKnown RBP9.25□□□□□ -0.93
EIF3F-203ENST00000528763 DCAF1Q9Y4B6 1507 aa9.19□□□□□ -0.94
EIF3F-203ENST00000528763 MYO15BQ96JP2 1530 aa9.11□□□□□ -0.95
EIF3F-203ENST00000528763 FOXD4L1Q9NU39 408 aa9.1□□□□□ -0.95
EIF3F-203ENST00000528763 PIAS4Q8N2W9 510 aaPredicted RBP9.07□□□□□ -0.96
EIF3F-203ENST00000528763 CNKSR2Q8WXI2 1034 aa9.04□□□□□ -0.96
EIF3F-203ENST00000528763 NACADO15069 1562 aa9.02□□□□□ -0.97
EIF3F-203ENST00000528763 ABCC9O60706 1549 aa9□□□□□ -0.97
EIF3F-203ENST00000528763 FKBP8Q14318 412 aa8.95□□□□□ -0.98
EIF3F-203ENST00000528763 RB1CC1Q8TDY2 1594 aa8.94□□□□□ -0.98
EIF3F-203ENST00000528763 DNAJC5BQ9UF47 199 aa8.92□□□□□ -0.98
EIF3F-203ENST00000528763 DCAF8L2P0C7V8 631 aa8.83□□□□□ -1
EIF3F-203ENST00000528763 SCAF1Q9H7N4 1312 aaKnown RBP8.8□□□□□ -1
EIF3F-203ENST00000528763 PRKCSHP14314 528 aaPredicted RBP8.79□□□□□ -1
EIF3F-203ENST00000528763 SCRIBQ14160 1630 aa8.79□□□□□ -1
EIF3F-203ENST00000528763 SHROOM4Q9ULL8 1493 aa8.72□□□□□ -1.01
EIF3F-203ENST00000528763 PLCB2Q00722 1185 aa8.72□□□□□ -1.01
EIF3F-203ENST00000528763 SLC4A2P04920 1241 aa8.7□□□□□ -1.02
EIF3F-203ENST00000528763 MAPK8IP2Q13387 824 aaPredicted RBP8.7□□□□□ -1.02
EIF3F-203ENST00000528763 UNC13AQ9UPW8 1703 aa8.69□□□□□ -1.02
EIF3F-203ENST00000528763 ATXN8OSP0DMR3 200 aa8.68□□□□□ -1.02
EIF3F-203ENST00000528763 RNF216Q9NWF9 866 aaPredicted RBP8.67□□□□□ -1.02
EIF3F-203ENST00000528763 TAOK2Q9UL54 1235 aa8.63□□□□□ -1.03
EIF3F-203ENST00000528763 BCANQ96GW7 911 aa8.62□□□□□ -1.03
EIF3F-203ENST00000528763 HAP1P54257 671 aaPredicted RBP8.61□□□□□ -1.03
EIF3F-203ENST00000528763 BICRAQ9NZM4 1560 aa8.57□□□□□ -1.04
EIF3F-203ENST00000528763 MYCNP04198 464 aaPredicted RBP8.57□□□□□ -1.04
EIF3F-203ENST00000528763 BAZ1AQ9NRL2 1556 aaPredicted RBP8.54□□□□□ -1.04
EIF3F-203ENST00000528763 TPRNQ4KMQ1 711 aa8.49□□□□□ -1.05
EIF3F-203ENST00000528763 VSIG10Q8N0Z9 540 aa8.48□□□□□ -1.05
EIF3F-203ENST00000528763 SMARCA4P51532 1647 aa8.47□□□□□ -1.05
EIF3F-203ENST00000528763 HOXD11P31277 338 aaPredicted RBP8.46□□□□□ -1.06
EIF3F-203ENST00000528763 RSF1Q96T23 1441 aaPredicted RBP8.44□□□□□ -1.06
EIF3F-203ENST00000528763 ATF5Q9Y2D1 282 aaPredicted RBP8.43□□□□□ -1.06
EIF3F-203ENST00000528763 PEG3Q9GZU2 1588 aa8.43□□□□□ -1.06
EIF3F-203ENST00000528763 MROH2BQ7Z745 1585 aa8.41□□□□□ -1.06
EIF3F-203ENST00000528763 CECR2Q9BXF3 1484 aa8.41□□□□□ -1.06
EIF3F-203ENST00000528763 KDM2AQ9Y2K7 1162 aa8.4□□□□□ -1.06
EIF3F-203ENST00000528763 SMARCA2P51531 1590 aa8.38□□□□□ -1.07
EIF3F-203ENST00000528763 EIF4G1Q04637 1599 aaKnown RBP8.36□□□□□ -1.07
EIF3F-203ENST00000528763 TOP2AP11388 1531 aaKnown RBP8.36□□□□□ -1.07
EIF3F-203ENST00000528763 SUPT5HO00267 1087 aaKnown RBP8.36□□□□□ -1.07
EIF3F-203ENST00000528763 PABPN1Q86U42 306 aaKnown RBP eCLIP8.36□□□□□ -1.07
EIF3F-203ENST00000528763 WIZO95785 1651 aa8.35□□□□□ -1.07
EIF3F-203ENST00000528763 FBLN2P98095 1184 aa8.34□□□□□ -1.07
EIF3F-203ENST00000528763 TIMELESSQ9UNS1 1208 aa8.33□□□□□ -1.08
EIF3F-203ENST00000528763 HMGXB3Q12766 1538 aa8.33□□□□□ -1.08
EIF3F-203ENST00000528763 FBXO3Q9UK99 471 aa8.32□□□□□ -1.08
EIF3F-203ENST00000528763 MSH5O43196 834 aa8.31□□□□□ -1.08
EIF3F-203ENST00000528763 DMRT2Q9Y5R5 561 aa8.31□□□□□ -1.08
EIF3F-203ENST00000528763 PKD2Q13563 968 aa8.3□□□□□ -1.08
EIF3F-203ENST00000528763 DAXXQ9UER7 740 aaPredicted RBP8.3□□□□□ -1.08
EIF3F-203ENST00000528763 ATAD2BQ9ULI0 1458 aa8.29□□□□□ -1.08
EIF3F-203ENST00000528763 BAZ1BQ9UIG0 1483 aaKnown RBP8.28□□□□□ -1.08
EIF3F-203ENST00000528763 IFNLR1Q8IU57 520 aaPredicted RBP8.27□□□□□ -1.09
EIF3F-203ENST00000528763 TULP1O00294 542 aaPredicted RBP8.26□□□□□ -1.09
EIF3F-203ENST00000528763 VASPP50552 380 aaPredicted RBP8.26□□□□□ -1.09
EIF3F-203ENST00000528763 NCAPD3P42695 1498 aa8.25□□□□□ -1.09
EIF3F-203ENST00000528763 CC2D2AQ9P2K1 1620 aa8.21□□□□□ -1.09
EIF3F-203ENST00000528763 NPM1P06748 294 aaKnown RBP eCLIP8.21□□□□□ -1.1
EIF3F-203ENST00000528763 BBXQ8WY36 941 aaPredicted RBP8.21□□□□□ -1.1
EIF3F-203ENST00000528763 ARXQ96QS3 562 aa8.21□□□□□ -1.1
EIF3F-203ENST00000528763 PAXIP1Q6ZW49 1069 aaPredicted RBP8.2□□□□□ -1.1
EIF3F-203ENST00000528763 PROM2Q8N271 834 aa8.19□□□□□ -1.1
EIF3F-203ENST00000528763 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.19□□□□□ -1.1
EIF3F-203ENST00000528763 SPDYE4A6NLX3 237 aa8.18□□□□□ -1.1
EIF3F-203ENST00000528763 CFAP44Q96MT7 982 aa8.18□□□□□ -1.1
EIF3F-203ENST00000528763 GTF3C3Q9Y5Q9 886 aa8.18□□□□□ -1.1
EIF3F-203ENST00000528763 CCDC88BA6NC98 1476 aa8.16□□□□□ -1.1
EIF3F-203ENST00000528763 TSHZ2Q9NRE2 1034 aa8.15□□□□□ -1.1
EIF3F-203ENST00000528763 PRDM2Q13029 1718 aa8.15□□□□□ -1.11
EIF3F-203ENST00000528763 SAMD1Q6SPF0 538 aaPredicted RBP8.1□□□□□ -1.11
EIF3F-203ENST00000528763 ZNF219Q9P2Y4 722 aaPredicted RBP8.09□□□□□ -1.11
EIF3F-203ENST00000528763 MKRN4PQ13434 485 aaPredicted RBP8.07□□□□□ -1.12
EIF3F-203ENST00000528763 CFTRP13569 1480 aa8.06□□□□□ -1.12
EIF3F-203ENST00000528763 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.05□□□□□ -1.12
EIF3F-203ENST00000528763 HNRNPUL2Q1KMD3 747 aaKnown RBP8.05□□□□□ -1.12
EIF3F-203ENST00000528763 SPRYD3Q8NCJ5 442 aa8.05□□□□□ -1.12
EIF3F-203ENST00000528763 LAMC3Q9Y6N6 1575 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms