RNA–Protein interactions for RNA: ENST00000528681.1

ARHGEF12-207, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 3

Gene ARHGEF12, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-207ENST00000528681 AEBP2Q6ZN18 517 aaPredicted RBP16.82■□□□□ 0.28
ARHGEF12-207ENST00000528681 CHIC1Q5VXU3 224 aa16.61■□□□□ 0.25
ARHGEF12-207ENST00000528681 PHF23Q9BUL5 403 aaPredicted RBP14.65□□□□□ -0.06
ARHGEF12-207ENST00000528681 SENP3Q9H4L4 574 aaPredicted RBP14.21□□□□□ -0.13
ARHGEF12-207ENST00000528681 PLPPR3Q6T4P5 718 aa13.56□□□□□ -0.24
ARHGEF12-207ENST00000528681 FOXD1Q16676 465 aa13.19□□□□□ -0.3
ARHGEF12-207ENST00000528681 PPP6R1Q9UPN7 881 aa12.87□□□□□ -0.35
ARHGEF12-207ENST00000528681 ADRA2BP18089 450 aa12.85□□□□□ -0.35
ARHGEF12-207ENST00000528681 PIAS4Q8N2W9 510 aaPredicted RBP12.47□□□□□ -0.41
ARHGEF12-207ENST00000528681 MSH5O43196 834 aa12.06□□□□□ -0.48
ARHGEF12-207ENST00000528681 PPP4R3CPQ6ZMV5 832 aa11.99□□□□□ -0.49
ARHGEF12-207ENST00000528681 KCNA4P22459 653 aa11.94□□□□□ -0.5
ARHGEF12-207ENST00000528681 SCAF1Q9H7N4 1312 aaKnown RBP11.73□□□□□ -0.53
ARHGEF12-207ENST00000528681 NCBP3Q53F19 620 aaKnown RBP11.71□□□□□ -0.53
ARHGEF12-207ENST00000528681 MAPK8IP2Q13387 824 aaPredicted RBP11.61□□□□□ -0.55
ARHGEF12-207ENST00000528681 CNKSR2Q8WXI2 1034 aa11.6□□□□□ -0.55
ARHGEF12-207ENST00000528681 NPM3O75607 178 aaKnown RBP11.56□□□□□ -0.56
ARHGEF12-207ENST00000528681 SLC4A1APQ9BWU0 796 aaKnown RBP11.39□□□□□ -0.59
ARHGEF12-207ENST00000528681 DMRT2Q9Y5R5 561 aa11.39□□□□□ -0.59
ARHGEF12-207ENST00000528681 RNF216Q9NWF9 866 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF12-207ENST00000528681 EHMT2Q96KQ7 1210 aa11.3□□□□□ -0.6
ARHGEF12-207ENST00000528681 HOXD11P31277 338 aaPredicted RBP11.24□□□□□ -0.61
ARHGEF12-207ENST00000528681 DNAJC5BQ9UF47 199 aa11.2□□□□□ -0.62
ARHGEF12-207ENST00000528681 CSRNP3Q8WYN3 585 aa11.1□□□□□ -0.63
ARHGEF12-207ENST00000528681 ZBTB22O15209 634 aa11.01□□□□□ -0.65
ARHGEF12-207ENST00000528681 FOXD4L1Q9NU39 408 aa10.92□□□□□ -0.66
ARHGEF12-207ENST00000528681 SLC4A2P04920 1241 aa10.88□□□□□ -0.67
ARHGEF12-207ENST00000528681 DCAF8L1A6NGE4 600 aa10.87□□□□□ -0.67
ARHGEF12-207ENST00000528681 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.69□□□□□ -0.72e-6■■■■□ 19.8
ARHGEF12-207ENST00000528681 MYCNP04198 464 aaPredicted RBP10.66□□□□□ -0.7
ARHGEF12-207ENST00000528681 POTEDQ86YR6 584 aa10.65□□□□□ -0.7
ARHGEF12-207ENST00000528681 U3KPZ7 1027 aaPredicted RBP10.55□□□□□ -0.72
ARHGEF12-207ENST00000528681 ATXN8OSP0DMR3 200 aa10.52□□□□□ -0.73
ARHGEF12-207ENST00000528681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.47□□□□□ -0.73
ARHGEF12-207ENST00000528681 HNRNPUL2Q1KMD3 747 aaKnown RBP10.47□□□□□ -0.73
ARHGEF12-207ENST00000528681 SAMD1Q6SPF0 538 aaPredicted RBP10.45□□□□□ -0.74
ARHGEF12-207ENST00000528681 ATF5Q9Y2D1 282 aaPredicted RBP10.39□□□□□ -0.75
ARHGEF12-207ENST00000528681 RNF39Q9H2S5 420 aa10.37□□□□□ -0.75
ARHGEF12-207ENST00000528681 APLP2Q06481 763 aa10.3□□□□□ -0.76
ARHGEF12-207ENST00000528681 C1QBPQ07021 282 aaKnown RBP10.25□□□□□ -0.77
ARHGEF12-207ENST00000528681 SPINK5Q9NQ38 1064 aaPredicted RBP10.21□□□□□ -0.77
ARHGEF12-207ENST00000528681 ZNF219Q9P2Y4 722 aaPredicted RBP10.2□□□□□ -0.78
ARHGEF12-207ENST00000528681 CAPN15O75808 1086 aa10.14□□□□□ -0.79
ARHGEF12-207ENST00000528681 TRHP20396 242 aaPredicted RBP10.14□□□□□ -0.79
ARHGEF12-207ENST00000528681 POLA2Q14181 598 aa10.04□□□□□ -0.8
ARHGEF12-207ENST00000528681 FKBP8Q14318 412 aa10.01□□□□□ -0.81
ARHGEF12-207ENST00000528681 ABCB7O75027 752 aa9.97□□□□□ -0.81
ARHGEF12-207ENST00000528681 MKRN4PQ13434 485 aaPredicted RBP9.95□□□□□ -0.82
ARHGEF12-207ENST00000528681 DSG3P32926 999 aa9.94□□□□□ -0.82
ARHGEF12-207ENST00000528681 CACNB1Q02641 598 aaPredicted RBP9.94□□□□□ -0.82
ARHGEF12-207ENST00000528681 FBLN2P98095 1184 aa9.91□□□□□ -0.82
ARHGEF12-207ENST00000528681 ZBTB12Q9Y330 459 aaPredicted RBP9.86□□□□□ -0.83
ARHGEF12-207ENST00000528681 SPDYE4A6NLX3 237 aa9.81□□□□□ -0.84
ARHGEF12-207ENST00000528681 PROM2Q8N271 834 aa9.69□□□□□ -0.86
ARHGEF12-207ENST00000528681 OSCARQ8IYS5 282 aa9.68□□□□□ -0.86
ARHGEF12-207ENST00000528681 SPDYE2BA6NHP3 402 aa9.62□□□□□ -0.87
ARHGEF12-207ENST00000528681 SPDYE6P0CI01 402 aa9.62□□□□□ -0.87
ARHGEF12-207ENST00000528681 SPDYE2Q495Y8 402 aa9.62□□□□□ -0.87
ARHGEF12-207ENST00000528681 ZNF692Q9BU19 519 aaPredicted RBP9.62□□□□□ -0.87
ARHGEF12-207ENST00000528681 FBXO3Q9UK99 471 aa9.59□□□□□ -0.87
ARHGEF12-207ENST00000528681 SSUH2Q9Y2M2 353 aa9.58□□□□□ -0.88
ARHGEF12-207ENST00000528681 PABPN1Q86U42 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
ARHGEF12-207ENST00000528681 VASPP50552 380 aaPredicted RBP9.46□□□□□ -0.9
ARHGEF12-207ENST00000528681 AMER1Q5JTC6 1135 aaPredicted RBP9.46□□□□□ -0.9
ARHGEF12-207ENST00000528681 RTN4Q9NQC3 1192 aaKnown RBP9.46□□□□□ -0.9
ARHGEF12-207ENST00000528681 RBM42Q9BTD8 480 aaKnown RBP9.44□□□□□ -0.9
ARHGEF12-207ENST00000528681 STAG3Q9UJ98 1225 aa9.39□□□□□ -0.91
ARHGEF12-207ENST00000528681 AKT1S1Q96B36 256 aa9.38□□□□□ -0.91
ARHGEF12-207ENST00000528681 IFNLR1Q8IU57 520 aaPredicted RBP9.36□□□□□ -0.91
ARHGEF12-207ENST00000528681 REM2Q8IYK8 340 aaPredicted RBP9.3□□□□□ -0.92
ARHGEF12-207ENST00000528681 MIER1Q8N108 512 aa9.28□□□□□ -0.92
ARHGEF12-207ENST00000528681 PLCD3Q8N3E9 789 aa9.28□□□□□ -0.92
ARHGEF12-207ENST00000528681 SPDYE1Q8NFV5 336 aaPredicted RBP9.28□□□□□ -0.92
ARHGEF12-207ENST00000528681 KLHL34Q8N239 644 aa9.24□□□□□ -0.93
ARHGEF12-207ENST00000528681 CLEC11AQ9Y240 323 aa9.23□□□□□ -0.93
ARHGEF12-207ENST00000528681 PITPNM1O00562 1244 aa9.19□□□□□ -0.94
ARHGEF12-207ENST00000528681 PLEKHG5O94827 1062 aa9.19□□□□□ -0.94
ARHGEF12-207ENST00000528681 PRR29P0C7W0 189 aa9.19□□□□□ -0.94
ARHGEF12-207ENST00000528681 SPOCK2Q92563 424 aa9.19□□□□□ -0.94
ARHGEF12-207ENST00000528681 ZBTB47Q9UFB7 747 aaPredicted RBP9.15□□□□□ -0.94
ARHGEF12-207ENST00000528681 CREBZFQ9NS37 354 aa9.13□□□□□ -0.95
ARHGEF12-207ENST00000528681 PKD2Q13563 968 aa9.12□□□□□ -0.95
ARHGEF12-207ENST00000528681 MNX1P50219 401 aaPredicted RBP9.07□□□□□ -0.96
ARHGEF12-207ENST00000528681 NUBP1P53384 320 aa9.03□□□□□ -0.96
ARHGEF12-207ENST00000528681 CIZ1Q9ULV3 898 aaPredicted RBP9.02□□□□□ -0.97
ARHGEF12-207ENST00000528681 ECM2O94769 699 aaPredicted RBP9.01□□□□□ -0.97
ARHGEF12-207ENST00000528681 CHADLQ6NUI6 762 aa9□□□□□ -0.97
ARHGEF12-207ENST00000528681 FXR2P51116 673 aaKnown RBP eCLIP8.98□□□□□ -0.976e-6■□□□□ 9.4
ARHGEF12-207ENST00000528681 CHRDL2Q6WN34 429 aa8.98□□□□□ -0.97
ARHGEF12-207ENST00000528681 GSE1Q14687 1217 aa8.96□□□□□ -0.98
ARHGEF12-207ENST00000528681 NPM1P06748 294 aaKnown RBP eCLIP8.95□□□□□ -0.98
ARHGEF12-207ENST00000528681 DCAF8L2P0C7V8 631 aa8.95□□□□□ -0.98
ARHGEF12-207ENST00000528681 PRKAR2AP13861 404 aaKnown RBP8.95□□□□□ -0.98
ARHGEF12-207ENST00000528681 DCAF8Q5TAQ9 597 aa8.94□□□□□ -0.98
ARHGEF12-207ENST00000528681 RASEFQ8IZ41 740 aa8.94□□□□□ -0.98
ARHGEF12-207ENST00000528681 FARP1Q9Y4F1 1045 aaPredicted RBP8.94□□□□□ -0.98
ARHGEF12-207ENST00000528681 RGL2O15211 777 aa8.93□□□□□ -0.98
ARHGEF12-207ENST00000528681 TRIM41Q8WV44 630 aa8.93□□□□□ -0.98
ARHGEF12-207ENST00000528681 FAM212AQ96EL1 285 aa8.93□□□□□ -0.98
ARHGEF12-207ENST00000528681 PIP4P2Q8N4L2 257 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms