RNA–Protein interactions for RNA: ENST00000528663.1

CYHR1-208, Transcript of cysteine and histidine rich 1, humanhuman

TSL 1 (best)

Gene CYHR1, Length 5,821 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYHR1-208ENST00000528663 DCAF8L2P0C7V8 631 aa26.31■■□□□ 1.8
CYHR1-208ENST00000528663 NISCHQ9Y2I1 1504 aa25.45■■□□□ 1.66
CYHR1-208ENST00000528663 SUPT5HO00267 1087 aaKnown RBP24.82■■□□□ 1.56
CYHR1-208ENST00000528663 SHROOM4Q9ULL8 1493 aa24.42■■□□□ 1.5
CYHR1-208ENST00000528663 EHMT2Q96KQ7 1210 aa23.83■■□□□ 1.41
CYHR1-208ENST00000528663 APLP2Q06481 763 aa23.74■■□□□ 1.39
CYHR1-208ENST00000528663 FAM9AQ8IZU1 332 aaPredicted RBP23.57■■□□□ 1.36
CYHR1-208ENST00000528663 PELP1Q8IZL8 1130 aaKnown RBP23.31■■□□□ 1.32
CYHR1-208ENST00000528663 TRIM41Q8WV44 630 aa23.12■■□□□ 1.29
CYHR1-208ENST00000528663 TTBK1Q5TCY1 1321 aaPredicted RBP23.02■■□□□ 1.28
CYHR1-208ENST00000528663 RANGAP1P46060 587 aaPredicted RBP22.95■■□□□ 1.26
CYHR1-208ENST00000528663 PCGF6Q9BYE7 350 aa22.92■■□□□ 1.26
CYHR1-208ENST00000528663 ATP1B4Q9UN42 357 aaPredicted RBP22.86■■□□□ 1.25
CYHR1-208ENST00000528663 UBTFP17480 764 aaKnown RBP22.84■■□□□ 1.25
CYHR1-208ENST00000528663 ZEB1P37275 1124 aaPredicted RBP22.78■■□□□ 1.24
CYHR1-208ENST00000528663 CCER1Q8TC90 406 aaPredicted RBP22.68■■□□□ 1.22
CYHR1-208ENST00000528663 CENPBP07199 599 aaPredicted RBP22.53■■□□□ 1.2
CYHR1-208ENST00000528663 ERICH6Q7L0X2 663 aa22.18■■□□□ 1.14
CYHR1-208ENST00000528663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.16■■□□□ 1.14
CYHR1-208ENST00000528663 HNRNPUL2Q1KMD3 747 aaKnown RBP22.16■■□□□ 1.14
CYHR1-208ENST00000528663 TRIM26Q12899 539 aaPredicted RBP22.15■■□□□ 1.14
CYHR1-208ENST00000528663 PPARGC1BQ86YN6 1023 aaKnown RBP22.14■■□□□ 1.14
CYHR1-208ENST00000528663 NEFLP07196 543 aa22.13■■□□□ 1.13
CYHR1-208ENST00000528663 MYT1LQ9UL68 1186 aa22.08■■□□□ 1.13
CYHR1-208ENST00000528663 CHIC1Q5VXU3 224 aa22.02■■□□□ 1.11
CYHR1-208ENST00000528663 ABCC9O60706 1549 aa21.99■■□□□ 1.11
CYHR1-208ENST00000528663 ITGAEP38570 1179 aa21.98■■□□□ 1.11
CYHR1-208ENST00000528663 YTHDC1Q96MU7 727 aaKnown RBP21.92■■□□□ 1.1
CYHR1-208ENST00000528663 LOC105371045A0A1W2PR82 267 aa21.88■■□□□ 1.09
CYHR1-208ENST00000528663 PABPN1Q86U42 306 aaKnown RBP eCLIP21.85■■□□□ 1.09
CYHR1-208ENST00000528663 POLR3GLQ9BT43 218 aa21.75■■□□□ 1.07
CYHR1-208ENST00000528663 HRCP23327 699 aa21.67■■□□□ 1.06
CYHR1-208ENST00000528663 MYT1Q01538 1121 aa21.59■■□□□ 1.05
CYHR1-208ENST00000528663 FAM50AQ14320 339 aaKnown RBP21.54■■□□□ 1.04
CYHR1-208ENST00000528663 DAXXQ9UER7 740 aaPredicted RBP21.45■■□□□ 1.02
CYHR1-208ENST00000528663 TRIM52Q96A61 297 aa21.43■■□□□ 1.02
CYHR1-208ENST00000528663 SLC4A1APQ9BWU0 796 aaKnown RBP21.43■■□□□ 1.02
CYHR1-208ENST00000528663 CNGB1Q14028 1251 aaPredicted RBP21.4■■□□□ 1.02
CYHR1-208ENST00000528663 FBLN2P98095 1184 aa21.36■■□□□ 1.01
CYHR1-208ENST00000528663 DIEXFQ68CQ4 756 aaKnown RBP21.23■□□□□ 0.99
CYHR1-208ENST00000528663 NEUROD1Q13562 356 aa21.22■□□□□ 0.99
CYHR1-208ENST00000528663 CSRNP3Q8WYN3 585 aa21.2■□□□□ 0.98
CYHR1-208ENST00000528663 SCRIBQ14160 1630 aa21.12■□□□□ 0.97
CYHR1-208ENST00000528663 ZNF326Q5BKZ1 582 aaKnown RBP21.09■□□□□ 0.97
CYHR1-208ENST00000528663 CDK11AQ9UQ88 783 aaPredicted RBP21.07■□□□□ 0.96
CYHR1-208ENST00000528663 P3H3Q8IVL6 736 aa21.07■□□□□ 0.96
CYHR1-208ENST00000528663 CLSPNQ9HAW4 1339 aa21.06■□□□□ 0.96
CYHR1-208ENST00000528663 ZCCHC6Q5VYS8 1495 aaKnown RBP21.03■□□□□ 0.96
CYHR1-208ENST00000528663 ANP32CO43423 234 aa21.03■□□□□ 0.96
CYHR1-208ENST00000528663 ARID3CA6NKF2 412 aa20.96■□□□□ 0.95
CYHR1-208ENST00000528663 ZNF316A6NFI3 1004 aaPredicted RBP20.93■□□□□ 0.94
CYHR1-208ENST00000528663 ZNF777Q9ULD5 760 aaPredicted RBP20.92■□□□□ 0.94
CYHR1-208ENST00000528663 CCDC180Q9P1Z9 1646 aa20.89■□□□□ 0.94
CYHR1-208ENST00000528663 BCANQ96GW7 911 aa20.87■□□□□ 0.93
CYHR1-208ENST00000528663 NEFMP07197 916 aa20.83■□□□□ 0.93
CYHR1-208ENST00000528663 ZBTB47Q9UFB7 747 aaPredicted RBP20.83■□□□□ 0.93
CYHR1-208ENST00000528663 RTL5Q5HYW3 569 aaPredicted RBP20.82■□□□□ 0.92
CYHR1-208ENST00000528663 NPM1P06748 294 aaKnown RBP eCLIP20.8■□□□□ 0.92
CYHR1-208ENST00000528663 ESF1Q9H501 851 aaKnown RBP20.8■□□□□ 0.92
CYHR1-208ENST00000528663 CANXP27824 592 aaKnown RBP20.7■□□□□ 0.9
CYHR1-208ENST00000528663 RB1CC1Q8TDY2 1594 aa20.68■□□□□ 0.9
CYHR1-208ENST00000528663 GTF3C3Q9Y5Q9 886 aa20.67■□□□□ 0.9
CYHR1-208ENST00000528663 SLC24A1O60721 1099 aa20.66■□□□□ 0.9
CYHR1-208ENST00000528663 TONSLQ96HA7 1378 aa20.65■□□□□ 0.9
CYHR1-208ENST00000528663 STAG3Q9UJ98 1225 aa20.63■□□□□ 0.89
CYHR1-208ENST00000528663 CHGAP10645 457 aaKnown RBP20.59■□□□□ 0.89
CYHR1-208ENST00000528663 CHMP7Q8WUX9 453 aaPredicted RBP20.56■□□□□ 0.88
CYHR1-208ENST00000528663 TSPY4P0CV99 314 aa20.53■□□□□ 0.88
CYHR1-208ENST00000528663 TSPY10P0CW01 314 aa20.53■□□□□ 0.88
CYHR1-208ENST00000528663 DCAF1Q9Y4B6 1507 aa20.53■□□□□ 0.88
CYHR1-208ENST00000528663 MTUS2Q5JR59 1369 aa20.5■□□□□ 0.87
CYHR1-208ENST00000528663 CHIC2Q9UKJ5 165 aa20.47■□□□□ 0.87
CYHR1-208ENST00000528663 NACADO15069 1562 aa20.46■□□□□ 0.87
CYHR1-208ENST00000528663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.44■□□□□ 0.86
CYHR1-208ENST00000528663 EEA1Q15075 1411 aa20.43■□□□□ 0.86
CYHR1-208ENST00000528663 CLIP1P30622 1438 aa20.42■□□□□ 0.86
CYHR1-208ENST00000528663 BCL11AQ9H165 835 aa20.4■□□□□ 0.86
CYHR1-208ENST00000528663 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
CYHR1-208ENST00000528663 ACIN1Q9UKV3 1341 aaKnown RBP20.36■□□□□ 0.85
CYHR1-208ENST00000528663 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
CYHR1-208ENST00000528663 BAZ1BQ9UIG0 1483 aaKnown RBP20.34■□□□□ 0.85
CYHR1-208ENST00000528663 DDX10Q13206 875 aaKnown RBP20.31■□□□□ 0.84
CYHR1-208ENST00000528663 GOLGA3Q08378 1498 aa20.31■□□□□ 0.84
CYHR1-208ENST00000528663 PLEKHD1A6NEE1 506 aa20.3■□□□□ 0.84
CYHR1-208ENST00000528663 ANP32AP39687 249 aaKnown RBP20.3■□□□□ 0.84
CYHR1-208ENST00000528663 WRNQ14191 1432 aaPredicted RBP eCLIP20.29■□□□□ 0.84
CYHR1-208ENST00000528663 HNRNPUQ00839 825 aaKnown RBP eCLIP20.28■□□□□ 0.84
CYHR1-208ENST00000528663 TMC1Q8TDI8 760 aa20.26■□□□□ 0.83
CYHR1-208ENST00000528663 FAM9BQ8IZU0 186 aa20.25■□□□□ 0.83
CYHR1-208ENST00000528663 KDM2AQ9Y2K7 1162 aa20.25■□□□□ 0.83
CYHR1-208ENST00000528663 KIF27Q86VH2 1401 aa20.24■□□□□ 0.83
CYHR1-208ENST00000528663 WDR43Q15061 677 aaKnown RBP eCLIP20.21■□□□□ 0.83
CYHR1-208ENST00000528663 KCNH8Q96L42 1107 aa20.21■□□□□ 0.83
CYHR1-208ENST00000528663 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.19■□□□□ 0.82
CYHR1-208ENST00000528663 RRP7BPQ9NSQ0 103 aa20.18■□□□□ 0.82
CYHR1-208ENST00000528663 CEP162Q5TB80 1403 aa20.17■□□□□ 0.82
CYHR1-208ENST00000528663 FKBP8Q14318 412 aa20.16■□□□□ 0.82
CYHR1-208ENST00000528663 UPF2Q9HAU5 1272 aaKnown RBP20.15■□□□□ 0.82
CYHR1-208ENST00000528663 EIF4G2P78344 907 aaKnown RBP eCLIP20.15■□□□□ 0.82
CYHR1-208ENST00000528663 BAZ1AQ9NRL2 1556 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms