RNA–Protein interactions for RNA: ENST00000528663.1

CYHR1-208, Transcript of cysteine and histidine rich 1, humanhuman

TSL 1 (best)

Gene CYHR1, Length 5,821 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYHR1-208ENST00000528663 FMR1Q06787 632 aaKnown RBP eCLIP15.85■□□□□ 0.137e-31■■■■■ 107.1
CYHR1-208ENST00000528663 SF3B4Q15427 424 aaKnown RBP eCLIP14.24□□□□□ -0.132e-13■■■■□ 21.3
CYHR1-208ENST00000528663 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.34■□□□□ 0.053e-13■■■■□ 22.2
CYHR1-208ENST00000528663 RBFOX2O43251 390 aaKnown RBP eCLIP12.58□□□□□ -0.41e-12■■□□□ 14.3
CYHR1-208ENST00000528663 SMNDC1O75940 238 aaKnown RBP eCLIP15.09■□□□□ 0.011e-10■■■■■ 38.6
CYHR1-208ENST00000528663 SLBPQ14493 270 aaKnown RBP eCLIP14.74□□□□□ -0.051e-9■■■■■ 47.2
CYHR1-208ENST00000528663 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.78■□□□□ 0.122e-9■□□□□ 10.1
CYHR1-208ENST00000528663 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.86■□□□□ 0.133e-9■■■■■ 59.9
CYHR1-208ENST00000528663 U2AF2P26368 475 aaKnown RBP eCLIP16.47■□□□□ 0.234e-9■□□□□ 11.2
CYHR1-208ENST00000528663 PCBP2Q15366 365 aaKnown RBP eCLIP14.51□□□□□ -0.099e-9■■■□□ 18.7
CYHR1-208ENST00000528663 NONOQ15233 471 aaKnown RBP eCLIP16.89■□□□□ 0.291e-7■■■□□ 18.6
CYHR1-208ENST00000528663 LSM11P83369 360 aaKnown RBP eCLIP13.12□□□□□ -0.311e-7■■■□□ 15.3
CYHR1-208ENST00000528663 UPF1Q92900 1129 aaKnown RBP eCLIP15.09■□□□□ 0.012e-7■■■■■ 37.4
CYHR1-208ENST00000528663 EWSR1Q01844 656 aaKnown RBP eCLIP13.03□□□□□ -0.322e-7■■■■□ 21.9
CYHR1-208ENST00000528663 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.41□□□□□ -0.13e-7■■■□□ 15.8
CYHR1-208ENST00000528663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.21■□□□□ 0.514e-7■■■■■ 34.3
CYHR1-208ENST00000528663 NKRFO15226 690 aaKnown RBP eCLIP15.73■□□□□ 0.116e-7■■□□□ 11.4
CYHR1-208ENST00000528663 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.68■□□□□ 0.421e-6■■■■■ 38.5
CYHR1-208ENST00000528663 HNRNPKP61978 463 aaKnown RBP eCLIP14.46□□□□□ -0.11e-6■■■■□ 23.1
CYHR1-208ENST00000528663 FUSP35637 526 aaKnown RBP eCLIP11.4□□□□□ -0.591e-6■□□□□ 8.3
CYHR1-208ENST00000528663 SF3B1O75533 1304 aaKnown RBP eCLIP15.37■□□□□ 0.051e-6■■■■■ 110.3
CYHR1-208ENST00000528663 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.68■□□□□ 0.12e-6■■■□□ 14.9
CYHR1-208ENST00000528663 FKBP4Q02790 459 aaKnown RBP eCLIP17.85■□□□□ 0.452e-6■■■□□ 15.6
CYHR1-208ENST00000528663 PPIGQ13427 754 aaKnown RBP eCLIP15.11■□□□□ 0.012e-6■■■■□ 24.3
CYHR1-208ENST00000528663 CSTF2P33240 577 aaKnown RBP eCLIP14.61□□□□□ -0.073e-6■■■□□ 18.3
CYHR1-208ENST00000528663 SF3A3Q12874 501 aaKnown RBP eCLIP16.16■□□□□ 0.183e-6■■■□□ 16.5
CYHR1-208ENST00000528663 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.71■□□□□ 0.113e-6■■■■■ 26.8
CYHR1-208ENST00000528663 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.7■□□□□ 0.264e-6■□□□□ 11.3
CYHR1-208ENST00000528663 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.35□□□□□ -0.114e-6■■■□□ 14.8
CYHR1-208ENST00000528663 AKAP1Q92667 903 aaKnown RBP eCLIP14.21□□□□□ -0.145e-6■■■■■ 35.1
CYHR1-208ENST00000528663 DDX6P26196 483 aaKnown RBP eCLIP14.9□□□□□ -0.026e-6■■■■□ 19.3
CYHR1-208ENST00000528663 PABPC4Q13310 644 aaKnown RBP eCLIP16.71■□□□□ 0.279e-6■■■■□ 24.7
CYHR1-208ENST00000528663 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.86■□□□□ 0.291e-5■■■■□ 25.8
Retrieved 33 of 33 RNA–protein pairs in 3.9 ms