RNA–Protein interactions for RNA: ENST00000525929.1

PCDHA7-202, Transcript of protocadherin alpha 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA7, Length 5,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7-202ENST00000525929 DCAF8L2P0C7V8 631 aa30.13■■■□□ 2.41
PCDHA7-202ENST00000525929 SUPT5HO00267 1087 aaKnown RBP28.56■■■□□ 2.16
PCDHA7-202ENST00000525929 NISCHQ9Y2I1 1504 aa28.43■■■□□ 2.14
PCDHA7-202ENST00000525929 SHROOM4Q9ULL8 1493 aa27.95■■■□□ 2.06
PCDHA7-202ENST00000525929 EHMT2Q96KQ7 1210 aa27.6■■■□□ 2.01
PCDHA7-202ENST00000525929 APLP2Q06481 763 aa27.28■■□□□ 1.96
PCDHA7-202ENST00000525929 PELP1Q8IZL8 1130 aaKnown RBP27.15■■□□□ 1.94
PCDHA7-202ENST00000525929 FAM9AQ8IZU1 332 aaPredicted RBP26.95■■□□□ 1.91
PCDHA7-202ENST00000525929 TTBK1Q5TCY1 1321 aaPredicted RBP26.68■■□□□ 1.86
PCDHA7-202ENST00000525929 PCGF6Q9BYE7 350 aa26.62■■□□□ 1.85
PCDHA7-202ENST00000525929 TRIM41Q8WV44 630 aa26.48■■□□□ 1.83
PCDHA7-202ENST00000525929 RANGAP1P46060 587 aaPredicted RBP26.45■■□□□ 1.83
PCDHA7-202ENST00000525929 ZEB1P37275 1124 aaPredicted RBP26.29■■□□□ 1.8
PCDHA7-202ENST00000525929 ATP1B4Q9UN42 357 aaPredicted RBP26.28■■□□□ 1.8
PCDHA7-202ENST00000525929 CCER1Q8TC90 406 aaPredicted RBP26.25■■□□□ 1.79
PCDHA7-202ENST00000525929 UBTFP17480 764 aaKnown RBP26.22■■□□□ 1.79
PCDHA7-202ENST00000525929 CENPBP07199 599 aaPredicted RBP26.21■■□□□ 1.79
PCDHA7-202ENST00000525929 ERICH6Q7L0X2 663 aa25.94■■□□□ 1.74
PCDHA7-202ENST00000525929 NEFLP07196 543 aa25.71■■□□□ 1.71
PCDHA7-202ENST00000525929 PPARGC1BQ86YN6 1023 aaKnown RBP25.64■■□□□ 1.7
PCDHA7-202ENST00000525929 YTHDC1Q96MU7 727 aaKnown RBP25.59■■□□□ 1.69
PCDHA7-202ENST00000525929 TRIM26Q12899 539 aaPredicted RBP25.53■■□□□ 1.68
PCDHA7-202ENST00000525929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.38■■□□□ 1.65
PCDHA7-202ENST00000525929 HNRNPUL2Q1KMD3 747 aaKnown RBP25.38■■□□□ 1.65
PCDHA7-202ENST00000525929 ITGAEP38570 1179 aa25.36■■□□□ 1.65
PCDHA7-202ENST00000525929 MYT1LQ9UL68 1186 aa25.32■■□□□ 1.64
PCDHA7-202ENST00000525929 LOC105371045A0A1W2PR82 267 aa25.23■■□□□ 1.63
PCDHA7-202ENST00000525929 CHIC1Q5VXU3 224 aa25.22■■□□□ 1.63
PCDHA7-202ENST00000525929 POLR3GLQ9BT43 218 aa25.18■■□□□ 1.62
PCDHA7-202ENST00000525929 HRCP23327 699 aa25.17■■□□□ 1.62
PCDHA7-202ENST00000525929 MYT1Q01538 1121 aa24.99■■□□□ 1.59
PCDHA7-202ENST00000525929 DAXXQ9UER7 740 aaPredicted RBP24.97■■□□□ 1.59
PCDHA7-202ENST00000525929 CNGB1Q14028 1251 aaPredicted RBP24.89■■□□□ 1.58
PCDHA7-202ENST00000525929 SLC4A1APQ9BWU0 796 aaKnown RBP24.73■■□□□ 1.55
PCDHA7-202ENST00000525929 FAM50AQ14320 339 aaKnown RBP24.72■■□□□ 1.55
PCDHA7-202ENST00000525929 PABPN1Q86U42 306 aaKnown RBP eCLIP24.7■■□□□ 1.55
PCDHA7-202ENST00000525929 ABCC9O60706 1549 aa24.63■■□□□ 1.53
PCDHA7-202ENST00000525929 DIEXFQ68CQ4 756 aaKnown RBP24.63■■□□□ 1.53
PCDHA7-202ENST00000525929 TRIM52Q96A61 297 aa24.61■■□□□ 1.53
PCDHA7-202ENST00000525929 CLSPNQ9HAW4 1339 aa24.48■■□□□ 1.51
PCDHA7-202ENST00000525929 NEUROD1Q13562 356 aa24.48■■□□□ 1.51
PCDHA7-202ENST00000525929 ZNF316A6NFI3 1004 aaPredicted RBP24.36■■□□□ 1.49
PCDHA7-202ENST00000525929 FBLN2P98095 1184 aa24.33■■□□□ 1.49
PCDHA7-202ENST00000525929 RTL5Q5HYW3 569 aaPredicted RBP24.32■■□□□ 1.48
PCDHA7-202ENST00000525929 ZNF326Q5BKZ1 582 aaKnown RBP24.31■■□□□ 1.48
PCDHA7-202ENST00000525929 ANP32CO43423 234 aa24.27■■□□□ 1.48
PCDHA7-202ENST00000525929 CSRNP3Q8WYN3 585 aa24.15■■□□□ 1.46
PCDHA7-202ENST00000525929 P3H3Q8IVL6 736 aa24.11■■□□□ 1.45
PCDHA7-202ENST00000525929 BCANQ96GW7 911 aa24.09■■□□□ 1.45
PCDHA7-202ENST00000525929 ZBTB47Q9UFB7 747 aaPredicted RBP24.07■■□□□ 1.44
PCDHA7-202ENST00000525929 ARID3CA6NKF2 412 aa24.03■■□□□ 1.44
PCDHA7-202ENST00000525929 GTF3C3Q9Y5Q9 886 aa24.02■■□□□ 1.44
PCDHA7-202ENST00000525929 CDK11AQ9UQ88 783 aaPredicted RBP24■■□□□ 1.43
PCDHA7-202ENST00000525929 NEFMP07197 916 aa23.95■■□□□ 1.42
PCDHA7-202ENST00000525929 ZNF777Q9ULD5 760 aaPredicted RBP23.95■■□□□ 1.42
PCDHA7-202ENST00000525929 CANXP27824 592 aaKnown RBP23.92■■□□□ 1.42
PCDHA7-202ENST00000525929 SLC24A1O60721 1099 aa23.88■■□□□ 1.41
PCDHA7-202ENST00000525929 BCL11AQ9H165 835 aa23.77■■□□□ 1.4
PCDHA7-202ENST00000525929 ESF1Q9H501 851 aaKnown RBP23.7■■□□□ 1.39
PCDHA7-202ENST00000525929 SCRIBQ14160 1630 aa23.69■■□□□ 1.38
PCDHA7-202ENST00000525929 TONSLQ96HA7 1378 aa23.68■■□□□ 1.38
PCDHA7-202ENST00000525929 ACIN1Q9UKV3 1341 aaKnown RBP23.67■■□□□ 1.38
PCDHA7-202ENST00000525929 CHGAP10645 457 aaKnown RBP23.62■■□□□ 1.37
PCDHA7-202ENST00000525929 ANP32AP39687 249 aaKnown RBP23.6■■□□□ 1.37
PCDHA7-202ENST00000525929 NPM1P06748 294 aaKnown RBP eCLIP23.59■■□□□ 1.37
PCDHA7-202ENST00000525929 STAG3Q9UJ98 1225 aa23.59■■□□□ 1.37
PCDHA7-202ENST00000525929 DDX10Q13206 875 aaKnown RBP23.49■■□□□ 1.35
PCDHA7-202ENST00000525929 HNRNPUQ00839 825 aaKnown RBP eCLIP23.48■■□□□ 1.35
PCDHA7-202ENST00000525929 CHIC2Q9UKJ5 165 aa23.47■■□□□ 1.35
PCDHA7-202ENST00000525929 NPM2Q86SE8 214 aaKnown RBP23.46■■□□□ 1.35
PCDHA7-202ENST00000525929 ZCCHC6Q5VYS8 1495 aaKnown RBP23.46■■□□□ 1.35
PCDHA7-202ENST00000525929 FKBP8Q14318 412 aa23.44■■□□□ 1.34
PCDHA7-202ENST00000525929 FAM9BQ8IZU0 186 aa23.44■■□□□ 1.34
PCDHA7-202ENST00000525929 TSPY4P0CV99 314 aa23.42■■□□□ 1.34
PCDHA7-202ENST00000525929 TSPY10P0CW01 314 aa23.42■■□□□ 1.34
PCDHA7-202ENST00000525929 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.42■■□□□ 1.34
PCDHA7-202ENST00000525929 DCAF1Q9Y4B6 1507 aa23.41■■□□□ 1.34
PCDHA7-202ENST00000525929 TMC1Q8TDI8 760 aa23.36■■□□□ 1.33
PCDHA7-202ENST00000525929 PLPPR3Q6T4P5 718 aa23.35■■□□□ 1.33
PCDHA7-202ENST00000525929 CCDC180Q9P1Z9 1646 aa23.35■■□□□ 1.33
PCDHA7-202ENST00000525929 MTUS2Q5JR59 1369 aa23.35■■□□□ 1.33
PCDHA7-202ENST00000525929 SALL2Q9Y467 1007 aaPredicted RBP23.34■■□□□ 1.33
PCDHA7-202ENST00000525929 UPF2Q9HAU5 1272 aaKnown RBP23.33■■□□□ 1.33
PCDHA7-202ENST00000525929 HSP90AA1P07900 732 aaKnown RBP23.32■■□□□ 1.32
PCDHA7-202ENST00000525929 CHMP7Q8WUX9 453 aaPredicted RBP23.29■■□□□ 1.32
PCDHA7-202ENST00000525929 KDM2AQ9Y2K7 1162 aa23.27■■□□□ 1.32
PCDHA7-202ENST00000525929 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.25■■□□□ 1.31
PCDHA7-202ENST00000525929 WDR43Q15061 677 aaKnown RBP eCLIP23.25■■□□□ 1.31
PCDHA7-202ENST00000525929 ANP32BQ92688 251 aaKnown RBP23.24■■□□□ 1.31
PCDHA7-202ENST00000525929 MRS2Q9HD23 443 aa23.23■■□□□ 1.31
PCDHA7-202ENST00000525929 CCDC136Q96JN2 1154 aa23.22■■□□□ 1.31
PCDHA7-202ENST00000525929 CLIP1P30622 1438 aa23.22■■□□□ 1.31
PCDHA7-202ENST00000525929 EIF4G2P78344 907 aaKnown RBP eCLIP23.13■■□□□ 1.29
PCDHA7-202ENST00000525929 RRP7BPQ9NSQ0 103 aa23.11■■□□□ 1.29
PCDHA7-202ENST00000525929 PLEKHD1A6NEE1 506 aa23.07■■□□□ 1.28
PCDHA7-202ENST00000525929 HIRIP3Q9BW71 556 aaPredicted RBP23.06■■□□□ 1.28
PCDHA7-202ENST00000525929 RSF1Q96T23 1441 aaPredicted RBP23.05■■□□□ 1.28
PCDHA7-202ENST00000525929 EEA1Q15075 1411 aa23.05■■□□□ 1.28
PCDHA7-202ENST00000525929 KCNH8Q96L42 1107 aa23.04■■□□□ 1.28
PCDHA7-202ENST00000525929 MIER1Q8N108 512 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms