RNA–Protein interactions for RNA: ENST00000525723.6

SLC38A6-207, Transcript of solute carrier family 38 member 6, humanhuman

TSL 2

Gene SLC38A6, Length 2,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-207ENST00000525723 NISCHQ9Y2I1 1504 aa22.59■■□□□ 1.21
SLC38A6-207ENST00000525723 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
SLC38A6-207ENST00000525723 CCDC180Q9P1Z9 1646 aa19.2■□□□□ 0.66
SLC38A6-207ENST00000525723 ZCCHC6Q5VYS8 1495 aaKnown RBP19.11■□□□□ 0.65
SLC38A6-207ENST00000525723 SUPT5HO00267 1087 aaKnown RBP18.89■□□□□ 0.62
SLC38A6-207ENST00000525723 DCAF8L2P0C7V8 631 aa18.73■□□□□ 0.59
SLC38A6-207ENST00000525723 DCAF1Q9Y4B6 1507 aa18.5■□□□□ 0.55
SLC38A6-207ENST00000525723 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
SLC38A6-207ENST00000525723 MYO15BQ96JP2 1530 aa18.36■□□□□ 0.53
SLC38A6-207ENST00000525723 ABCC9O60706 1549 aa18.04■□□□□ 0.48
SLC38A6-207ENST00000525723 SCRIBQ14160 1630 aa18.04■□□□□ 0.48
SLC38A6-207ENST00000525723 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
SLC38A6-207ENST00000525723 LOC105371045A0A1W2PR82 267 aa17.85■□□□□ 0.45
SLC38A6-207ENST00000525723 PCGF6Q9BYE7 350 aa17.79■□□□□ 0.44
SLC38A6-207ENST00000525723 HRCP23327 699 aa17.76■□□□□ 0.43
SLC38A6-207ENST00000525723 RB1CC1Q8TDY2 1594 aa17.74■□□□□ 0.43
SLC38A6-207ENST00000525723 NACADO15069 1562 aa17.73■□□□□ 0.43
SLC38A6-207ENST00000525723 CECR2Q9BXF3 1484 aa17.66■□□□□ 0.42
SLC38A6-207ENST00000525723 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
SLC38A6-207ENST00000525723 TRIM41Q8WV44 630 aa17.57■□□□□ 0.4
SLC38A6-207ENST00000525723 WIZO95785 1651 aa17.52■□□□□ 0.4
SLC38A6-207ENST00000525723 PPARGC1BQ86YN6 1023 aaKnown RBP17.47■□□□□ 0.39
SLC38A6-207ENST00000525723 FAM9AQ8IZU1 332 aaPredicted RBP17.47■□□□□ 0.39
SLC38A6-207ENST00000525723 TRIM26Q12899 539 aaPredicted RBP17.41■□□□□ 0.38
SLC38A6-207ENST00000525723 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
SLC38A6-207ENST00000525723 EHMT2Q96KQ7 1210 aa17.35■□□□□ 0.37
SLC38A6-207ENST00000525723 UNC13AQ9UPW8 1703 aa17.31■□□□□ 0.36
SLC38A6-207ENST00000525723 EIF4G1Q04637 1599 aaKnown RBP17.28■□□□□ 0.36
SLC38A6-207ENST00000525723 SMARCA4P51532 1647 aa17.22■□□□□ 0.35
SLC38A6-207ENST00000525723 TOP2AP11388 1531 aaKnown RBP17.19■□□□□ 0.34
SLC38A6-207ENST00000525723 CCDC88BA6NC98 1476 aa17.14■□□□□ 0.33
SLC38A6-207ENST00000525723 ABCC8Q09428 1581 aa17.13■□□□□ 0.33
SLC38A6-207ENST00000525723 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
SLC38A6-207ENST00000525723 PABPN1Q86U42 306 aaKnown RBP eCLIP17.05■□□□□ 0.32
SLC38A6-207ENST00000525723 BICRAQ9NZM4 1560 aa17.04■□□□□ 0.32
SLC38A6-207ENST00000525723 ZEB1P37275 1124 aaPredicted RBP16.96■□□□□ 0.31
SLC38A6-207ENST00000525723 SOGA1O94964 1423 aa16.95■□□□□ 0.3
SLC38A6-207ENST00000525723 RUSC2Q8N2Y8 1516 aa16.89■□□□□ 0.29
SLC38A6-207ENST00000525723 PEG3Q9GZU2 1588 aa16.87■□□□□ 0.29
SLC38A6-207ENST00000525723 CEP162Q5TB80 1403 aa16.84■□□□□ 0.29
SLC38A6-207ENST00000525723 CSRNP3Q8WYN3 585 aa16.8■□□□□ 0.28
SLC38A6-207ENST00000525723 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
SLC38A6-207ENST00000525723 TTBK1Q5TCY1 1321 aaPredicted RBP16.78■□□□□ 0.28
SLC38A6-207ENST00000525723 TNIKQ9UKE5 1360 aa16.78■□□□□ 0.28
SLC38A6-207ENST00000525723 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.28
SLC38A6-207ENST00000525723 EEA1Q15075 1411 aa16.76■□□□□ 0.27
SLC38A6-207ENST00000525723 ATAD2BQ9ULI0 1458 aa16.76■□□□□ 0.27
SLC38A6-207ENST00000525723 SYNJ1O43426 1573 aa16.75■□□□□ 0.27
SLC38A6-207ENST00000525723 UBTFP17480 764 aaKnown RBP16.73■□□□□ 0.27
SLC38A6-207ENST00000525723 BAZ1BQ9UIG0 1483 aaKnown RBP16.71■□□□□ 0.27
SLC38A6-207ENST00000525723 GOLGA3Q08378 1498 aa16.69■□□□□ 0.26
SLC38A6-207ENST00000525723 CCER1Q8TC90 406 aaPredicted RBP16.68■□□□□ 0.26
SLC38A6-207ENST00000525723 KIF21BO75037 1637 aa16.6■□□□□ 0.25
SLC38A6-207ENST00000525723 CEP164Q9UPV0 1460 aa16.59■□□□□ 0.25
SLC38A6-207ENST00000525723 RAPGEF2Q9Y4G8 1499 aa16.53■□□□□ 0.24
SLC38A6-207ENST00000525723 TOP2BQ02880 1626 aa16.51■□□□□ 0.23
SLC38A6-207ENST00000525723 CLIP1P30622 1438 aa16.51■□□□□ 0.23
SLC38A6-207ENST00000525723 BIVM-ERCC5R4GMW8 1640 aa16.46■□□□□ 0.23
SLC38A6-207ENST00000525723 RANGAP1P46060 587 aaPredicted RBP16.45■□□□□ 0.22
SLC38A6-207ENST00000525723 VPS8Q8N3P4 1428 aa16.44■□□□□ 0.22
SLC38A6-207ENST00000525723 NCAPD3P42695 1498 aa16.42■□□□□ 0.22
SLC38A6-207ENST00000525723 HMGXB3Q12766 1538 aa16.42■□□□□ 0.22
SLC38A6-207ENST00000525723 SCAF1Q9H7N4 1312 aaKnown RBP16.39■□□□□ 0.21
SLC38A6-207ENST00000525723 HNRNPUL2Q1KMD3 747 aaKnown RBP16.38■□□□□ 0.21
SLC38A6-207ENST00000525723 CUX1P39880 1505 aa16.37■□□□□ 0.21
SLC38A6-207ENST00000525723 DIEXFQ68CQ4 756 aaKnown RBP16.35■□□□□ 0.21
SLC38A6-207ENST00000525723 PRXQ9BXM0 1461 aa16.34■□□□□ 0.21
SLC38A6-207ENST00000525723 ERICH3Q5RHP9 1530 aa16.32■□□□□ 0.2
SLC38A6-207ENST00000525723 APLP2Q06481 763 aa16.31■□□□□ 0.2
SLC38A6-207ENST00000525723 CFTRP13569 1480 aa16.3■□□□□ 0.2
SLC38A6-207ENST00000525723 ARAP1Q96P48 1450 aa16.28■□□□□ 0.2
SLC38A6-207ENST00000525723 KIF27Q86VH2 1401 aa16.24■□□□□ 0.19
SLC38A6-207ENST00000525723 ZNF316A6NFI3 1004 aaPredicted RBP16.22■□□□□ 0.19
SLC38A6-207ENST00000525723 NEUROD1Q13562 356 aa16.22■□□□□ 0.19
SLC38A6-207ENST00000525723 PRDM2Q13029 1718 aa16.21■□□□□ 0.18
SLC38A6-207ENST00000525723 KANK4Q5T7N3 995 aaPredicted RBP16.21■□□□□ 0.18
SLC38A6-207ENST00000525723 ACIN1Q9UKV3 1341 aaKnown RBP16.2■□□□□ 0.18
SLC38A6-207ENST00000525723 ARHGAP35Q9NRY4 1499 aa16.14■□□□□ 0.17
SLC38A6-207ENST00000525723 CUX2O14529 1486 aa16.12■□□□□ 0.17
SLC38A6-207ENST00000525723 CADPSQ9ULU8 1353 aa16.1■□□□□ 0.17
SLC38A6-207ENST00000525723 IGF1RP08069 1367 aa16.1■□□□□ 0.17
SLC38A6-207ENST00000525723 FGD5Q6ZNL6 1462 aa16.07■□□□□ 0.16
SLC38A6-207ENST00000525723 DHX57Q6P158 1386 aaKnown RBP16.06■□□□□ 0.16
SLC38A6-207ENST00000525723 RRBP1Q9P2E9 1410 aaKnown RBP16.06■□□□□ 0.16
SLC38A6-207ENST00000525723 CENPBP07199 599 aaPredicted RBP16.05■□□□□ 0.16
SLC38A6-207ENST00000525723 CC2D2AQ9P2K1 1620 aa16.05■□□□□ 0.16
SLC38A6-207ENST00000525723 GTF3C3Q9Y5Q9 886 aa16.04■□□□□ 0.16
SLC38A6-207ENST00000525723 MIER1Q8N108 512 aa16.03■□□□□ 0.16
SLC38A6-207ENST00000525723 CARMIL1Q5VZK9 1371 aa16.01■□□□□ 0.15
SLC38A6-207ENST00000525723 YTHDC1Q96MU7 727 aaKnown RBP15.99■□□□□ 0.15
SLC38A6-207ENST00000525723 CCNB3Q8WWL7 1395 aa15.99■□□□□ 0.15
SLC38A6-207ENST00000525723 FANCD2Q9BXW9 1451 aa15.97■□□□□ 0.15
SLC38A6-207ENST00000525723 CLSPNQ9HAW4 1339 aa15.97■□□□□ 0.15
SLC38A6-207ENST00000525723 ITGAEP38570 1179 aa15.96■□□□□ 0.15
SLC38A6-207ENST00000525723 TIAM1Q13009 1591 aa15.95■□□□□ 0.14
SLC38A6-207ENST00000525723 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
SLC38A6-207ENST00000525723 NESP48681 1621 aa15.91■□□□□ 0.14
SLC38A6-207ENST00000525723 PELP1Q8IZL8 1130 aaKnown RBP15.91■□□□□ 0.14
SLC38A6-207ENST00000525723 P3H3Q8IVL6 736 aa15.9■□□□□ 0.14
SLC38A6-207ENST00000525723 DNMBPQ6XZF7 1577 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms