RNA–Protein interactions for RNA: ENST00000524432.5

MACF1-227, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 4,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-227ENST00000524432 NISCHQ9Y2I1 1504 aa31.56■■■□□ 2.64
MACF1-227ENST00000524432 DCAF8L2P0C7V8 631 aa30.67■■■□□ 2.5
MACF1-227ENST00000524432 SUPT5HO00267 1087 aaKnown RBP29.96■■■□□ 2.39
MACF1-227ENST00000524432 SHROOM4Q9ULL8 1493 aa29.8■■■□□ 2.36
MACF1-227ENST00000524432 EHMT2Q96KQ7 1210 aa28.61■■■□□ 2.17
MACF1-227ENST00000524432 PCGF6Q9BYE7 350 aa28.23■■■□□ 2.11
MACF1-227ENST00000524432 FAM9AQ8IZU1 332 aaPredicted RBP28.11■■■□□ 2.09
MACF1-227ENST00000524432 TTBK1Q5TCY1 1321 aaPredicted RBP27.62■■■□□ 2.01
MACF1-227ENST00000524432 TRIM41Q8WV44 630 aa27.58■■■□□ 2.01
MACF1-227ENST00000524432 CHIC1Q5VXU3 224 aa27.51■■■□□ 2
MACF1-227ENST00000524432 LOC105371045A0A1W2PR82 267 aa27.43■■□□□ 1.98
MACF1-227ENST00000524432 PPARGC1BQ86YN6 1023 aaKnown RBP27.24■■□□□ 1.95
MACF1-227ENST00000524432 HRCP23327 699 aa27.18■■□□□ 1.94
MACF1-227ENST00000524432 RANGAP1P46060 587 aaPredicted RBP27.11■■□□□ 1.93
MACF1-227ENST00000524432 APLP2Q06481 763 aa27.07■■□□□ 1.92
MACF1-227ENST00000524432 CCER1Q8TC90 406 aaPredicted RBP27.02■■□□□ 1.92
MACF1-227ENST00000524432 TRIM26Q12899 539 aaPredicted RBP26.97■■□□□ 1.91
MACF1-227ENST00000524432 ZEB1P37275 1124 aaPredicted RBP26.93■■□□□ 1.9
MACF1-227ENST00000524432 UBTFP17480 764 aaKnown RBP26.89■■□□□ 1.9
MACF1-227ENST00000524432 CENPBP07199 599 aaPredicted RBP26.46■■□□□ 1.83
MACF1-227ENST00000524432 YTHDC1Q96MU7 727 aaKnown RBP26.42■■□□□ 1.82
MACF1-227ENST00000524432 ATP1B4Q9UN42 357 aaPredicted RBP26.38■■□□□ 1.81
MACF1-227ENST00000524432 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.37■■□□□ 1.81
MACF1-227ENST00000524432 ABCC9O60706 1549 aa26.33■■□□□ 1.81
MACF1-227ENST00000524432 ZCCHC6Q5VYS8 1495 aaKnown RBP26.3■■□□□ 1.8
MACF1-227ENST00000524432 HNRNPUL2Q1KMD3 747 aaKnown RBP26.23■■□□□ 1.79
MACF1-227ENST00000524432 PELP1Q8IZL8 1130 aaKnown RBP26.2■■□□□ 1.78
MACF1-227ENST00000524432 PABPN1Q86U42 306 aaKnown RBP eCLIP26.12■■□□□ 1.77
MACF1-227ENST00000524432 ITGAEP38570 1179 aa26.07■■□□□ 1.76
MACF1-227ENST00000524432 MYO15BQ96JP2 1530 aa26.02■■□□□ 1.76
MACF1-227ENST00000524432 DIEXFQ68CQ4 756 aaKnown RBP25.89■■□□□ 1.73
MACF1-227ENST00000524432 SCRIBQ14160 1630 aa25.75■■□□□ 1.71
MACF1-227ENST00000524432 DCAF1Q9Y4B6 1507 aa25.66■■□□□ 1.7
MACF1-227ENST00000524432 CCDC180Q9P1Z9 1646 aa25.64■■□□□ 1.69
MACF1-227ENST00000524432 CSRNP3Q8WYN3 585 aa25.6■■□□□ 1.69
MACF1-227ENST00000524432 GTF3C3Q9Y5Q9 886 aa25.49■■□□□ 1.67
MACF1-227ENST00000524432 NEFLP07196 543 aa25.46■■□□□ 1.67
MACF1-227ENST00000524432 RSF1Q96T23 1441 aaPredicted RBP25.45■■□□□ 1.66
MACF1-227ENST00000524432 FAM50AQ14320 339 aaKnown RBP25.36■■□□□ 1.65
MACF1-227ENST00000524432 ZNF316A6NFI3 1004 aaPredicted RBP25.35■■□□□ 1.65
MACF1-227ENST00000524432 CNGB1Q14028 1251 aaPredicted RBP25.3■■□□□ 1.64
MACF1-227ENST00000524432 NEUROD1Q13562 356 aa25.28■■□□□ 1.64
MACF1-227ENST00000524432 ACIN1Q9UKV3 1341 aaKnown RBP25.27■■□□□ 1.64
MACF1-227ENST00000524432 ERICH6Q7L0X2 663 aa25.24■■□□□ 1.63
MACF1-227ENST00000524432 POLR3GLQ9BT43 218 aa25.21■■□□□ 1.63
MACF1-227ENST00000524432 P3H3Q8IVL6 736 aa25.18■■□□□ 1.62
MACF1-227ENST00000524432 SCAF1Q9H7N4 1312 aaKnown RBP25.04■■□□□ 1.6
MACF1-227ENST00000524432 CECR2Q9BXF3 1484 aa25.04■■□□□ 1.6
MACF1-227ENST00000524432 BCANQ96GW7 911 aa25.03■■□□□ 1.6
MACF1-227ENST00000524432 TRIM52Q96A61 297 aa24.95■■□□□ 1.58
MACF1-227ENST00000524432 ARID3CA6NKF2 412 aa24.88■■□□□ 1.57
MACF1-227ENST00000524432 MYT1Q01538 1121 aa24.88■■□□□ 1.57
MACF1-227ENST00000524432 CEP162Q5TB80 1403 aa24.85■■□□□ 1.57
MACF1-227ENST00000524432 MIER1Q8N108 512 aa24.83■■□□□ 1.57
MACF1-227ENST00000524432 RB1CC1Q8TDY2 1594 aa24.78■■□□□ 1.56
MACF1-227ENST00000524432 CLIP1P30622 1438 aa24.76■■□□□ 1.55
MACF1-227ENST00000524432 ANP32CO43423 234 aa24.74■■□□□ 1.55
MACF1-227ENST00000524432 ZNF326Q5BKZ1 582 aaKnown RBP24.68■■□□□ 1.54
MACF1-227ENST00000524432 DDX10Q13206 875 aaKnown RBP24.67■■□□□ 1.54
MACF1-227ENST00000524432 MROH2BQ7Z745 1585 aa24.67■■□□□ 1.54
MACF1-227ENST00000524432 NACADO15069 1562 aa24.66■■□□□ 1.54
MACF1-227ENST00000524432 MYT1LQ9UL68 1186 aa24.66■■□□□ 1.54
MACF1-227ENST00000524432 SOGA1O94964 1423 aa24.66■■□□□ 1.54
MACF1-227ENST00000524432 WRNQ14191 1432 aaPredicted RBP eCLIP24.64■■□□□ 1.53
MACF1-227ENST00000524432 TNIKQ9UKE5 1360 aa24.62■■□□□ 1.53
MACF1-227ENST00000524432 HIRIP3Q9BW71 556 aaPredicted RBP24.61■■□□□ 1.53
MACF1-227ENST00000524432 FBLN2P98095 1184 aa24.6■■□□□ 1.53
MACF1-227ENST00000524432 GOLGA3Q08378 1498 aa24.57■■□□□ 1.52
MACF1-227ENST00000524432 EEA1Q15075 1411 aa24.53■■□□□ 1.52
MACF1-227ENST00000524432 BAZ1AQ9NRL2 1556 aaPredicted RBP24.49■■□□□ 1.51
MACF1-227ENST00000524432 ABCC8Q09428 1581 aa24.47■■□□□ 1.51
MACF1-227ENST00000524432 CCDC88BA6NC98 1476 aa24.47■■□□□ 1.51
MACF1-227ENST00000524432 CHIC2Q9UKJ5 165 aa24.46■■□□□ 1.51
MACF1-227ENST00000524432 FKBP8Q14318 412 aa24.46■■□□□ 1.51
MACF1-227ENST00000524432 ZNF777Q9ULD5 760 aaPredicted RBP24.41■■□□□ 1.5
MACF1-227ENST00000524432 TONSLQ96HA7 1378 aa24.4■■□□□ 1.5
MACF1-227ENST00000524432 CEP164Q9UPV0 1460 aa24.35■■□□□ 1.49
MACF1-227ENST00000524432 BAZ1BQ9UIG0 1483 aaKnown RBP24.34■■□□□ 1.49
MACF1-227ENST00000524432 WIZO95785 1651 aa24.33■■□□□ 1.49
MACF1-227ENST00000524432 HNRNPUQ00839 825 aaKnown RBP eCLIP24.31■■□□□ 1.48
MACF1-227ENST00000524432 CDK11AQ9UQ88 783 aaPredicted RBP24.27■■□□□ 1.48
MACF1-227ENST00000524432 SLC4A1APQ9BWU0 796 aaKnown RBP24.27■■□□□ 1.48
MACF1-227ENST00000524432 SIN3AQ96ST3 1273 aa24.25■■□□□ 1.47
MACF1-227ENST00000524432 FAM9BQ8IZU0 186 aa24.23■■□□□ 1.47
MACF1-227ENST00000524432 KANK4Q5T7N3 995 aaPredicted RBP24.22■■□□□ 1.47
MACF1-227ENST00000524432 MTUS2Q5JR59 1369 aa24.21■■□□□ 1.47
MACF1-227ENST00000524432 DAXXQ9UER7 740 aaPredicted RBP24.21■■□□□ 1.47
MACF1-227ENST00000524432 RRP7BPQ9NSQ0 103 aa24.2■■□□□ 1.47
MACF1-227ENST00000524432 KIF27Q86VH2 1401 aa24.17■■□□□ 1.46
MACF1-227ENST00000524432 RUSC2Q8N2Y8 1516 aa24.14■■□□□ 1.46
MACF1-227ENST00000524432 IRX6P78412 446 aaPredicted RBP24.14■■□□□ 1.46
MACF1-227ENST00000524432 CLSPNQ9HAW4 1339 aa24.07■■□□□ 1.44
MACF1-227ENST00000524432 VPS8Q8N3P4 1428 aa24.07■■□□□ 1.44
MACF1-227ENST00000524432 SALL2Q9Y467 1007 aaPredicted RBP24.05■■□□□ 1.44
MACF1-227ENST00000524432 SENP3-EIF4A1A0A087X0R7 540 aa24.02■■□□□ 1.44
MACF1-227ENST00000524432 CCNB3Q8WWL7 1395 aa24.02■■□□□ 1.44
MACF1-227ENST00000524432 RTL5Q5HYW3 569 aaPredicted RBP24.01■■□□□ 1.43
MACF1-227ENST00000524432 MRS2Q9HD23 443 aa23.99■■□□□ 1.43
MACF1-227ENST00000524432 KDM2AQ9Y2K7 1162 aa23.96■■□□□ 1.43
MACF1-227ENST00000524432 TOP2AP11388 1531 aaKnown RBP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms