RNA–Protein interactions for RNA: ENST00000523671.6

MEG3-221, Transcript of maternally expressed 3, humanhuman

TSL 5

Gene MEG3, Length 2,368 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-221ENST00000523671 NISCHQ9Y2I1 1504 aa28.05■■■□□ 2.08
MEG3-221ENST00000523671 CCDC180Q9P1Z9 1646 aa23.95■■□□□ 1.42
MEG3-221ENST00000523671 ZCCHC6Q5VYS8 1495 aaKnown RBP23.73■■□□□ 1.39
MEG3-221ENST00000523671 SHROOM4Q9ULL8 1493 aa23.68■■□□□ 1.38
MEG3-221ENST00000523671 SUPT5HO00267 1087 aaKnown RBP23.16■■□□□ 1.3
MEG3-221ENST00000523671 DCAF8L2P0C7V8 631 aa23.12■■□□□ 1.29
MEG3-221ENST00000523671 DCAF1Q9Y4B6 1507 aa23.09■■□□□ 1.29
MEG3-221ENST00000523671 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
MEG3-221ENST00000523671 MYO15BQ96JP2 1530 aa22.48■■□□□ 1.19
MEG3-221ENST00000523671 ABCC9O60706 1549 aa22.36■■□□□ 1.17
MEG3-221ENST00000523671 SCRIBQ14160 1630 aa22.34■■□□□ 1.17
MEG3-221ENST00000523671 NACADO15069 1562 aa22.16■■□□□ 1.14
MEG3-221ENST00000523671 RSF1Q96T23 1441 aaPredicted RBP22.13■■□□□ 1.13
MEG3-221ENST00000523671 PELP1Q8IZL8 1130 aaKnown RBP21.97■■□□□ 1.11
MEG3-221ENST00000523671 RB1CC1Q8TDY2 1594 aa21.89■■□□□ 1.09
MEG3-221ENST00000523671 CECR2Q9BXF3 1484 aa21.85■■□□□ 1.09
MEG3-221ENST00000523671 LOC105371045A0A1W2PR82 267 aa21.8■■□□□ 1.08
MEG3-221ENST00000523671 MROH2BQ7Z745 1585 aa21.78■■□□□ 1.08
MEG3-221ENST00000523671 WIZO95785 1651 aa21.64■■□□□ 1.05
MEG3-221ENST00000523671 PCGF6Q9BYE7 350 aa21.63■■□□□ 1.05
MEG3-221ENST00000523671 TRIM41Q8WV44 630 aa21.63■■□□□ 1.05
MEG3-221ENST00000523671 HRCP23327 699 aa21.61■■□□□ 1.05
MEG3-221ENST00000523671 BAZ1AQ9NRL2 1556 aaPredicted RBP21.56■■□□□ 1.04
MEG3-221ENST00000523671 MYT1Q01538 1121 aa21.47■■□□□ 1.03
MEG3-221ENST00000523671 UNC13AQ9UPW8 1703 aa21.45■■□□□ 1.02
MEG3-221ENST00000523671 SMARCA4P51532 1647 aa21.39■■□□□ 1.01
MEG3-221ENST00000523671 FAM9AQ8IZU1 332 aaPredicted RBP21.39■■□□□ 1.01
MEG3-221ENST00000523671 EIF4G1Q04637 1599 aaKnown RBP21.36■■□□□ 1.01
MEG3-221ENST00000523671 TOP2AP11388 1531 aaKnown RBP21.35■■□□□ 1.01
MEG3-221ENST00000523671 TRIM26Q12899 539 aaPredicted RBP21.32■■□□□ 1
MEG3-221ENST00000523671 CCDC88BA6NC98 1476 aa21.23■□□□□ 0.99
MEG3-221ENST00000523671 BICRAQ9NZM4 1560 aa21.22■□□□□ 0.99
MEG3-221ENST00000523671 SMARCA2P51531 1590 aa21.22■□□□□ 0.99
MEG3-221ENST00000523671 PABPN1Q86U42 306 aaKnown RBP eCLIP21.15■□□□□ 0.98
MEG3-221ENST00000523671 EHMT2Q96KQ7 1210 aa21.14■□□□□ 0.97
MEG3-221ENST00000523671 PPARGC1BQ86YN6 1023 aaKnown RBP21.11■□□□□ 0.97
MEG3-221ENST00000523671 ABCC8Q09428 1581 aa21.09■□□□□ 0.97
MEG3-221ENST00000523671 PEG3Q9GZU2 1588 aa21.03■□□□□ 0.96
MEG3-221ENST00000523671 SOGA1O94964 1423 aa20.87■□□□□ 0.93
MEG3-221ENST00000523671 ATAD2BQ9ULI0 1458 aa20.87■□□□□ 0.93
MEG3-221ENST00000523671 EEA1Q15075 1411 aa20.82■□□□□ 0.92
MEG3-221ENST00000523671 ZEB1P37275 1124 aaPredicted RBP20.81■□□□□ 0.92
MEG3-221ENST00000523671 BAZ1BQ9UIG0 1483 aaKnown RBP20.79■□□□□ 0.92
MEG3-221ENST00000523671 WRNQ14191 1432 aaPredicted RBP eCLIP20.79■□□□□ 0.92
MEG3-221ENST00000523671 RUSC2Q8N2Y8 1516 aa20.77■□□□□ 0.92
MEG3-221ENST00000523671 CSRNP3Q8WYN3 585 aa20.75■□□□□ 0.91
MEG3-221ENST00000523671 TNIKQ9UKE5 1360 aa20.74■□□□□ 0.91
MEG3-221ENST00000523671 CEP162Q5TB80 1403 aa20.74■□□□□ 0.91
MEG3-221ENST00000523671 SYNJ1O43426 1573 aa20.7■□□□□ 0.9
MEG3-221ENST00000523671 GOLGA3Q08378 1498 aa20.64■□□□□ 0.89
MEG3-221ENST00000523671 UBTFP17480 764 aaKnown RBP20.6■□□□□ 0.89
MEG3-221ENST00000523671 CEP164Q9UPV0 1460 aa20.54■□□□□ 0.88
MEG3-221ENST00000523671 TTBK1Q5TCY1 1321 aaPredicted RBP20.54■□□□□ 0.88
MEG3-221ENST00000523671 KIF21BO75037 1637 aa20.53■□□□□ 0.88
MEG3-221ENST00000523671 NCAPD3P42695 1498 aa20.51■□□□□ 0.87
MEG3-221ENST00000523671 HMGXB3Q12766 1538 aa20.5■□□□□ 0.87
MEG3-221ENST00000523671 TOP2BQ02880 1626 aa20.48■□□□□ 0.87
MEG3-221ENST00000523671 SCAF1Q9H7N4 1312 aaKnown RBP20.45■□□□□ 0.86
MEG3-221ENST00000523671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.44■□□□□ 0.86
MEG3-221ENST00000523671 BIVM-ERCC5R4GMW8 1640 aa20.41■□□□□ 0.86
MEG3-221ENST00000523671 SLC24A1O60721 1099 aa20.4■□□□□ 0.86
MEG3-221ENST00000523671 CCER1Q8TC90 406 aaPredicted RBP20.39■□□□□ 0.85
MEG3-221ENST00000523671 RAPGEF2Q9Y4G8 1499 aa20.39■□□□□ 0.85
MEG3-221ENST00000523671 CLIP1P30622 1438 aa20.38■□□□□ 0.85
MEG3-221ENST00000523671 CFTRP13569 1480 aa20.3■□□□□ 0.84
MEG3-221ENST00000523671 VPS8Q8N3P4 1428 aa20.29■□□□□ 0.84
MEG3-221ENST00000523671 CUX1P39880 1505 aa20.29■□□□□ 0.84
MEG3-221ENST00000523671 PRXQ9BXM0 1461 aa20.24■□□□□ 0.83
MEG3-221ENST00000523671 ERICH3Q5RHP9 1530 aa20.24■□□□□ 0.83
MEG3-221ENST00000523671 KIF27Q86VH2 1401 aa20.16■□□□□ 0.82
MEG3-221ENST00000523671 CC2D2AQ9P2K1 1620 aa20.16■□□□□ 0.82
MEG3-221ENST00000523671 RANGAP1P46060 587 aaPredicted RBP20.15■□□□□ 0.82
MEG3-221ENST00000523671 PRDM2Q13029 1718 aa20.13■□□□□ 0.81
MEG3-221ENST00000523671 APLP2Q06481 763 aa20.12■□□□□ 0.81
MEG3-221ENST00000523671 ARAP1Q96P48 1450 aa20.09■□□□□ 0.81
MEG3-221ENST00000523671 CADPSQ9ULU8 1353 aa20.08■□□□□ 0.8
MEG3-221ENST00000523671 HNRNPUL2Q1KMD3 747 aaKnown RBP20.06■□□□□ 0.8
MEG3-221ENST00000523671 CUX2O14529 1486 aa19.98■□□□□ 0.79
MEG3-221ENST00000523671 IGF1RP08069 1367 aa19.95■□□□□ 0.78
MEG3-221ENST00000523671 FGD5Q6ZNL6 1462 aa19.94■□□□□ 0.78
MEG3-221ENST00000523671 ARHGAP35Q9NRY4 1499 aa19.94■□□□□ 0.78
MEG3-221ENST00000523671 DIEXFQ68CQ4 756 aaKnown RBP19.92■□□□□ 0.78
MEG3-221ENST00000523671 KANK4Q5T7N3 995 aaPredicted RBP19.91■□□□□ 0.78
MEG3-221ENST00000523671 FANCD2Q9BXW9 1451 aa19.88■□□□□ 0.77
MEG3-221ENST00000523671 CARMIL1Q5VZK9 1371 aa19.86■□□□□ 0.77
MEG3-221ENST00000523671 ZNF316A6NFI3 1004 aaPredicted RBP19.85■□□□□ 0.77
MEG3-221ENST00000523671 PRKCSHP14314 528 aaPredicted RBP19.82■□□□□ 0.76
MEG3-221ENST00000523671 RRBP1Q9P2E9 1410 aaKnown RBP19.81■□□□□ 0.76
MEG3-221ENST00000523671 DNMBPQ6XZF7 1577 aa19.79■□□□□ 0.76
MEG3-221ENST00000523671 BCL11AQ9H165 835 aa19.76■□□□□ 0.75
MEG3-221ENST00000523671 NESP48681 1621 aa19.74■□□□□ 0.75
MEG3-221ENST00000523671 TOPBP1Q92547 1522 aa19.74■□□□□ 0.75
MEG3-221ENST00000523671 RAD54L2Q9Y4B4 1467 aa19.73■□□□□ 0.75
MEG3-221ENST00000523671 ABCA10Q8WWZ4 1543 aa19.73■□□□□ 0.75
MEG3-221ENST00000523671 DHX57Q6P158 1386 aaKnown RBP19.72■□□□□ 0.75
MEG3-221ENST00000523671 POLA1P09884 1462 aaPredicted RBP19.72■□□□□ 0.75
MEG3-221ENST00000523671 MAP3K1Q13233 1512 aa19.71■□□□□ 0.75
MEG3-221ENST00000523671 CCNB3Q8WWL7 1395 aa19.71■□□□□ 0.75
MEG3-221ENST00000523671 CLSPNQ9HAW4 1339 aa19.71■□□□□ 0.75
MEG3-221ENST00000523671 TIAM1Q13009 1591 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms