RNA–Protein interactions for RNA: ENST00000523505.1

CCDC71L-202, Transcript of coiled-coil domain containing 71 like, humanhuman

APPRIS P2 BASIC

Gene CCDC71L, Length 4,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71L-202ENST00000523505 NISCHQ9Y2I1 1504 aa31.02■■■□□ 2.56
CCDC71L-202ENST00000523505 DCAF8L2P0C7V8 631 aa29.84■■■□□ 2.37
CCDC71L-202ENST00000523505 SHROOM4Q9ULL8 1493 aa28.83■■■□□ 2.21
CCDC71L-202ENST00000523505 SUPT5HO00267 1087 aaKnown RBP28.78■■■□□ 2.2
CCDC71L-202ENST00000523505 EHMT2Q96KQ7 1210 aa27.43■■□□□ 1.98
CCDC71L-202ENST00000523505 FAM9AQ8IZU1 332 aaPredicted RBP26.99■■□□□ 1.91
CCDC71L-202ENST00000523505 PCGF6Q9BYE7 350 aa26.65■■□□□ 1.86
CCDC71L-202ENST00000523505 TRIM41Q8WV44 630 aa26.53■■□□□ 1.84
CCDC71L-202ENST00000523505 TTBK1Q5TCY1 1321 aaPredicted RBP26.4■■□□□ 1.82
CCDC71L-202ENST00000523505 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
CCDC71L-202ENST00000523505 LOC105371045A0A1W2PR82 267 aa26.24■■□□□ 1.79
CCDC71L-202ENST00000523505 ABCC9O60706 1549 aa26.16■■□□□ 1.78
CCDC71L-202ENST00000523505 RANGAP1P46060 587 aaPredicted RBP26.12■■□□□ 1.77
CCDC71L-202ENST00000523505 PPARGC1BQ86YN6 1023 aaKnown RBP26.03■■□□□ 1.76
CCDC71L-202ENST00000523505 APLP2Q06481 763 aa25.92■■□□□ 1.74
CCDC71L-202ENST00000523505 UBTFP17480 764 aaKnown RBP25.87■■□□□ 1.73
CCDC71L-202ENST00000523505 ZCCHC6Q5VYS8 1495 aaKnown RBP25.83■■□□□ 1.73
CCDC71L-202ENST00000523505 PABPN1Q86U42 306 aaKnown RBP eCLIP25.79■■□□□ 1.72
CCDC71L-202ENST00000523505 CCER1Q8TC90 406 aaPredicted RBP25.59■■□□□ 1.69
CCDC71L-202ENST00000523505 TRIM26Q12899 539 aaPredicted RBP25.56■■□□□ 1.68
CCDC71L-202ENST00000523505 HRCP23327 699 aa25.49■■□□□ 1.67
CCDC71L-202ENST00000523505 ATP1B4Q9UN42 357 aaPredicted RBP25.44■■□□□ 1.66
CCDC71L-202ENST00000523505 CCDC180Q9P1Z9 1646 aa25.44■■□□□ 1.66
CCDC71L-202ENST00000523505 ZEB1P37275 1124 aaPredicted RBP25.35■■□□□ 1.65
CCDC71L-202ENST00000523505 SCRIBQ14160 1630 aa25.34■■□□□ 1.65
CCDC71L-202ENST00000523505 HNRNPUL2Q1KMD3 747 aaKnown RBP25.07■■□□□ 1.6
CCDC71L-202ENST00000523505 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.04■■□□□ 1.6
CCDC71L-202ENST00000523505 ITGAEP38570 1179 aa25■■□□□ 1.59
CCDC71L-202ENST00000523505 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
CCDC71L-202ENST00000523505 RSF1Q96T23 1441 aaPredicted RBP24.86■■□□□ 1.57
CCDC71L-202ENST00000523505 YTHDC1Q96MU7 727 aaKnown RBP24.81■■□□□ 1.56
CCDC71L-202ENST00000523505 CSRNP3Q8WYN3 585 aa24.76■■□□□ 1.55
CCDC71L-202ENST00000523505 CENPBP07199 599 aaPredicted RBP24.7■■□□□ 1.54
CCDC71L-202ENST00000523505 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
CCDC71L-202ENST00000523505 DCAF1Q9Y4B6 1507 aa24.57■■□□□ 1.52
CCDC71L-202ENST00000523505 PELP1Q8IZL8 1130 aaKnown RBP24.47■■□□□ 1.51
CCDC71L-202ENST00000523505 NACADO15069 1562 aa24.46■■□□□ 1.51
CCDC71L-202ENST00000523505 RB1CC1Q8TDY2 1594 aa24.46■■□□□ 1.51
CCDC71L-202ENST00000523505 P3H3Q8IVL6 736 aa24.43■■□□□ 1.5
CCDC71L-202ENST00000523505 FAM50AQ14320 339 aaKnown RBP24.38■■□□□ 1.49
CCDC71L-202ENST00000523505 DIEXFQ68CQ4 756 aaKnown RBP24.37■■□□□ 1.49
CCDC71L-202ENST00000523505 MROH2BQ7Z745 1585 aa24.23■■□□□ 1.47
CCDC71L-202ENST00000523505 ARID3CA6NKF2 412 aa24.17■■□□□ 1.46
CCDC71L-202ENST00000523505 NEUROD1Q13562 356 aa24.16■■□□□ 1.46
CCDC71L-202ENST00000523505 CNGB1Q14028 1251 aaPredicted RBP24.1■■□□□ 1.45
CCDC71L-202ENST00000523505 FBLN2P98095 1184 aa24.09■■□□□ 1.45
CCDC71L-202ENST00000523505 BAZ1AQ9NRL2 1556 aaPredicted RBP24.08■■□□□ 1.44
CCDC71L-202ENST00000523505 POLR3GLQ9BT43 218 aa24.06■■□□□ 1.44
CCDC71L-202ENST00000523505 WRNQ14191 1432 aaPredicted RBP eCLIP24.02■■□□□ 1.44
CCDC71L-202ENST00000523505 TRIM52Q96A61 297 aa23.97■■□□□ 1.43
CCDC71L-202ENST00000523505 ZNF316A6NFI3 1004 aaPredicted RBP23.97■■□□□ 1.43
CCDC71L-202ENST00000523505 CEP162Q5TB80 1403 aa23.97■■□□□ 1.43
CCDC71L-202ENST00000523505 BAZ1BQ9UIG0 1483 aaKnown RBP23.97■■□□□ 1.43
CCDC71L-202ENST00000523505 SOGA1O94964 1423 aa23.95■■□□□ 1.42
CCDC71L-202ENST00000523505 CLIP1P30622 1438 aa23.93■■□□□ 1.42
CCDC71L-202ENST00000523505 MYT1LQ9UL68 1186 aa23.91■■□□□ 1.42
CCDC71L-202ENST00000523505 CCDC88BA6NC98 1476 aa23.9■■□□□ 1.42
CCDC71L-202ENST00000523505 NEFLP07196 543 aa23.88■■□□□ 1.41
CCDC71L-202ENST00000523505 WIZO95785 1651 aa23.87■■□□□ 1.41
CCDC71L-202ENST00000523505 ABCC8Q09428 1581 aa23.86■■□□□ 1.41
CCDC71L-202ENST00000523505 MYT1Q01538 1121 aa23.8■■□□□ 1.4
CCDC71L-202ENST00000523505 GOLGA3Q08378 1498 aa23.79■■□□□ 1.4
CCDC71L-202ENST00000523505 TNIKQ9UKE5 1360 aa23.78■■□□□ 1.4
CCDC71L-202ENST00000523505 GTF3C3Q9Y5Q9 886 aa23.77■■□□□ 1.4
CCDC71L-202ENST00000523505 EEA1Q15075 1411 aa23.77■■□□□ 1.4
CCDC71L-202ENST00000523505 ZNF326Q5BKZ1 582 aaKnown RBP23.68■■□□□ 1.38
CCDC71L-202ENST00000523505 ZNF777Q9ULD5 760 aaPredicted RBP23.65■■□□□ 1.38
CCDC71L-202ENST00000523505 CHIC2Q9UKJ5 165 aa23.61■■□□□ 1.37
CCDC71L-202ENST00000523505 CEP164Q9UPV0 1460 aa23.6■■□□□ 1.37
CCDC71L-202ENST00000523505 ACIN1Q9UKV3 1341 aaKnown RBP23.59■■□□□ 1.37
CCDC71L-202ENST00000523505 KIF27Q86VH2 1401 aa23.57■■□□□ 1.36
CCDC71L-202ENST00000523505 TOP2AP11388 1531 aaKnown RBP23.52■■□□□ 1.36
CCDC71L-202ENST00000523505 RUSC2Q8N2Y8 1516 aa23.5■■□□□ 1.35
CCDC71L-202ENST00000523505 BCANQ96GW7 911 aa23.49■■□□□ 1.35
CCDC71L-202ENST00000523505 HIRIP3Q9BW71 556 aaPredicted RBP23.48■■□□□ 1.35
CCDC71L-202ENST00000523505 ANP32CO43423 234 aa23.45■■□□□ 1.35
CCDC71L-202ENST00000523505 DDX10Q13206 875 aaKnown RBP23.44■■□□□ 1.34
CCDC71L-202ENST00000523505 MIER1Q8N108 512 aa23.44■■□□□ 1.34
CCDC71L-202ENST00000523505 MTUS2Q5JR59 1369 aa23.44■■□□□ 1.34
CCDC71L-202ENST00000523505 SMARCA4P51532 1647 aa23.42■■□□□ 1.34
CCDC71L-202ENST00000523505 ERICH6Q7L0X2 663 aa23.42■■□□□ 1.34
CCDC71L-202ENST00000523505 ATAD2BQ9ULI0 1458 aa23.41■■□□□ 1.34
CCDC71L-202ENST00000523505 CDK11AQ9UQ88 783 aaPredicted RBP23.4■■□□□ 1.34
CCDC71L-202ENST00000523505 KANK4Q5T7N3 995 aaPredicted RBP23.4■■□□□ 1.34
CCDC71L-202ENST00000523505 CUX2O14529 1486 aa23.39■■□□□ 1.33
CCDC71L-202ENST00000523505 RRP7BPQ9NSQ0 103 aa23.35■■□□□ 1.33
CCDC71L-202ENST00000523505 CHMP7Q8WUX9 453 aaPredicted RBP23.35■■□□□ 1.33
CCDC71L-202ENST00000523505 SMARCA2P51531 1590 aa23.34■■□□□ 1.33
CCDC71L-202ENST00000523505 TONSLQ96HA7 1378 aa23.34■■□□□ 1.33
CCDC71L-202ENST00000523505 CARMIL1Q5VZK9 1371 aa23.33■■□□□ 1.33
CCDC71L-202ENST00000523505 SCAF1Q9H7N4 1312 aaKnown RBP23.28■■□□□ 1.32
CCDC71L-202ENST00000523505 SLC4A1APQ9BWU0 796 aaKnown RBP23.27■■□□□ 1.32
CCDC71L-202ENST00000523505 VPS8Q8N3P4 1428 aa23.26■■□□□ 1.31
CCDC71L-202ENST00000523505 SIN3AQ96ST3 1273 aa23.24■■□□□ 1.31
CCDC71L-202ENST00000523505 RAPGEF2Q9Y4G8 1499 aa23.23■■□□□ 1.31
CCDC71L-202ENST00000523505 TDRD9Q8NDG6 1382 aaKnown RBP23.18■■□□□ 1.3
CCDC71L-202ENST00000523505 CCNB3Q8WWL7 1395 aa23.14■■□□□ 1.29
CCDC71L-202ENST00000523505 CADPSQ9ULU8 1353 aa23.13■■□□□ 1.29
CCDC71L-202ENST00000523505 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.11■■□□□ 1.29
CCDC71L-202ENST00000523505 KDM2AQ9Y2K7 1162 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms