RNA–Protein interactions for RNA: ENST00000523070.1

IGKV2-4-201, Transcript of immunoglobulin kappa variable 2-4 (pseudogene), humanhuman

BASIC

Gene IGKV2-4, Length 340 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-4-201ENST00000523070 AEBP2Q6ZN18 517 aaPredicted RBP28.1■■■□□ 2.09
IGKV2-4-201ENST00000523070 CHIC1Q5VXU3 224 aa27.51■■□□□ 1.99
IGKV2-4-201ENST00000523070 PHF23Q9BUL5 403 aaPredicted RBP24.23■■□□□ 1.47
IGKV2-4-201ENST00000523070 SENP3Q9H4L4 574 aaPredicted RBP23.78■■□□□ 1.4
IGKV2-4-201ENST00000523070 PLPPR3Q6T4P5 718 aa22.34■■□□□ 1.17
IGKV2-4-201ENST00000523070 FOXD1Q16676 465 aa22.08■■□□□ 1.13
IGKV2-4-201ENST00000523070 PPP6R1Q9UPN7 881 aa21.33■■□□□ 1.01
IGKV2-4-201ENST00000523070 ADRA2BP18089 450 aa21.27■■□□□ 1
IGKV2-4-201ENST00000523070 PIAS4Q8N2W9 510 aaPredicted RBP20.79■□□□□ 0.92
IGKV2-4-201ENST00000523070 MSH5O43196 834 aa20.3■□□□□ 0.84
IGKV2-4-201ENST00000523070 PPP4R3CPQ6ZMV5 832 aa19.69■□□□□ 0.74
IGKV2-4-201ENST00000523070 SCAF1Q9H7N4 1312 aaKnown RBP19.42■□□□□ 0.7
IGKV2-4-201ENST00000523070 KCNA4P22459 653 aa19.34■□□□□ 0.69
IGKV2-4-201ENST00000523070 MAPK8IP2Q13387 824 aaPredicted RBP19.28■□□□□ 0.68
IGKV2-4-201ENST00000523070 NCBP3Q53F19 620 aaKnown RBP19.16■□□□□ 0.66
IGKV2-4-201ENST00000523070 CNKSR2Q8WXI2 1034 aa19.13■□□□□ 0.65
IGKV2-4-201ENST00000523070 DMRT2Q9Y5R5 561 aa19.03■□□□□ 0.64
IGKV2-4-201ENST00000523070 NPM3O75607 178 aaKnown RBP18.95■□□□□ 0.62
IGKV2-4-201ENST00000523070 RNF216Q9NWF9 866 aaPredicted RBP18.75■□□□□ 0.59
IGKV2-4-201ENST00000523070 HOXD11P31277 338 aaPredicted RBP18.69■□□□□ 0.58
IGKV2-4-201ENST00000523070 DNAJC5BQ9UF47 199 aa18.5■□□□□ 0.55
IGKV2-4-201ENST00000523070 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
IGKV2-4-201ENST00000523070 POTEDQ86YR6 584 aa18.36■□□□□ 0.53
IGKV2-4-201ENST00000523070 DCAF8L1A6NGE4 600 aa18.05■□□□□ 0.48
IGKV2-4-201ENST00000523070 EHMT2Q96KQ7 1210 aa17.92■□□□□ 0.46
IGKV2-4-201ENST00000523070 SLC4A2P04920 1241 aa17.9■□□□□ 0.46
IGKV2-4-201ENST00000523070 ZBTB22O15209 634 aa17.84■□□□□ 0.45
IGKV2-4-201ENST00000523070 CSRNP3Q8WYN3 585 aa17.79■□□□□ 0.44
IGKV2-4-201ENST00000523070 FOXD4L1Q9NU39 408 aa17.77■□□□□ 0.44
IGKV2-4-201ENST00000523070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.69■□□□□ 0.42
IGKV2-4-201ENST00000523070 U3KPZ7 1027 aaPredicted RBP17.51■□□□□ 0.39
IGKV2-4-201ENST00000523070 MYCNP04198 464 aaPredicted RBP17.48■□□□□ 0.39
IGKV2-4-201ENST00000523070 RNF39Q9H2S5 420 aa17.44■□□□□ 0.38
IGKV2-4-201ENST00000523070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.26■□□□□ 0.35
IGKV2-4-201ENST00000523070 HNRNPUL2Q1KMD3 747 aaKnown RBP17.26■□□□□ 0.35
IGKV2-4-201ENST00000523070 C1QBPQ07021 282 aaKnown RBP17.21■□□□□ 0.35
IGKV2-4-201ENST00000523070 SAMD1Q6SPF0 538 aaPredicted RBP17.21■□□□□ 0.35
IGKV2-4-201ENST00000523070 ATXN8OSP0DMR3 200 aa17.17■□□□□ 0.34
IGKV2-4-201ENST00000523070 ATF5Q9Y2D1 282 aaPredicted RBP17.04■□□□□ 0.32
IGKV2-4-201ENST00000523070 APLP2Q06481 763 aa17.03■□□□□ 0.32
IGKV2-4-201ENST00000523070 SPINK5Q9NQ38 1064 aaPredicted RBP16.97■□□□□ 0.31
IGKV2-4-201ENST00000523070 CAPN15O75808 1086 aa16.83■□□□□ 0.28
IGKV2-4-201ENST00000523070 CACNB1Q02641 598 aaPredicted RBP16.83■□□□□ 0.28
IGKV2-4-201ENST00000523070 ZNF219Q9P2Y4 722 aaPredicted RBP16.81■□□□□ 0.28
IGKV2-4-201ENST00000523070 TRHP20396 242 aaPredicted RBP16.77■□□□□ 0.28
IGKV2-4-201ENST00000523070 DSG3P32926 999 aa16.62■□□□□ 0.25
IGKV2-4-201ENST00000523070 ABCC9O60706 1549 aa16.59■□□□□ 0.25
IGKV2-4-201ENST00000523070 POLA2Q14181 598 aa16.56■□□□□ 0.24
IGKV2-4-201ENST00000523070 ABCB7O75027 752 aa16.53■□□□□ 0.24
IGKV2-4-201ENST00000523070 NISCHQ9Y2I1 1504 aa16.5■□□□□ 0.23
IGKV2-4-201ENST00000523070 MKRN4PQ13434 485 aaPredicted RBP16.32■□□□□ 0.2
IGKV2-4-201ENST00000523070 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
IGKV2-4-201ENST00000523070 FBLN2P98095 1184 aa16.23■□□□□ 0.19
IGKV2-4-201ENST00000523070 DNAJC5Q9H3Z4 198 aa16.13■□□□□ 0.17
IGKV2-4-201ENST00000523070 FKBP8Q14318 412 aa16.01■□□□□ 0.15
IGKV2-4-201ENST00000523070 OSCARQ8IYS5 282 aa16■□□□□ 0.15
IGKV2-4-201ENST00000523070 SPDYE4A6NLX3 237 aa15.92■□□□□ 0.14
IGKV2-4-201ENST00000523070 SPDYE2BA6NHP3 402 aa15.88■□□□□ 0.13
IGKV2-4-201ENST00000523070 SPDYE6P0CI01 402 aa15.88■□□□□ 0.13
IGKV2-4-201ENST00000523070 SPDYE2Q495Y8 402 aa15.88■□□□□ 0.13
IGKV2-4-201ENST00000523070 SSUH2Q9Y2M2 353 aa15.81■□□□□ 0.12
IGKV2-4-201ENST00000523070 PROM2Q8N271 834 aa15.79■□□□□ 0.12
IGKV2-4-201ENST00000523070 ZNF692Q9BU19 519 aaPredicted RBP15.79■□□□□ 0.12
IGKV2-4-201ENST00000523070 RBM42Q9BTD8 480 aaKnown RBP15.78■□□□□ 0.12
IGKV2-4-201ENST00000523070 AKT1S1Q96B36 256 aa15.64■□□□□ 0.09
IGKV2-4-201ENST00000523070 PABPN1Q86U42 306 aaKnown RBP eCLIP15.6■□□□□ 0.09
IGKV2-4-201ENST00000523070 REM2Q8IYK8 340 aaPredicted RBP15.48■□□□□ 0.07
IGKV2-4-201ENST00000523070 FBXO3Q9UK99 471 aa15.41■□□□□ 0.06
IGKV2-4-201ENST00000523070 SPDYE1Q8NFV5 336 aaPredicted RBP15.37■□□□□ 0.05
IGKV2-4-201ENST00000523070 STAG3Q9UJ98 1225 aa15.35■□□□□ 0.05
IGKV2-4-201ENST00000523070 PITPNM1O00562 1244 aa15.31■□□□□ 0.04
IGKV2-4-201ENST00000523070 CCDC180Q9P1Z9 1646 aa15.25■□□□□ 0.03
IGKV2-4-201ENST00000523070 CLEC11AQ9Y240 323 aa15.24■□□□□ 0.03
IGKV2-4-201ENST00000523070 VASPP50552 380 aaPredicted RBP15.23■□□□□ 0.03
IGKV2-4-201ENST00000523070 PRR29P0C7W0 189 aa15.14■□□□□ 0.01
IGKV2-4-201ENST00000523070 RB1CC1Q8TDY2 1594 aa15.14■□□□□ 0.01
IGKV2-4-201ENST00000523070 CHRDL2Q6WN34 429 aa15.1■□□□□ 0.01
IGKV2-4-201ENST00000523070 IFNLR1Q8IU57 520 aaPredicted RBP15.06■□□□□ 0
IGKV2-4-201ENST00000523070 MIER1Q8N108 512 aa15.05■□□□□ -0
IGKV2-4-201ENST00000523070 CECR2Q9BXF3 1484 aa15.04■□□□□ -0
IGKV2-4-201ENST00000523070 FXR2P51116 673 aaKnown RBP eCLIP15.04■□□□□ -0
IGKV2-4-201ENST00000523070 CREBZFQ9NS37 354 aa15.04■□□□□ -0
IGKV2-4-201ENST00000523070 PLCD3Q8N3E9 789 aa15.01□□□□□ -0.01
IGKV2-4-201ENST00000523070 TRIM41Q8WV44 630 aa14.98□□□□□ -0.01
IGKV2-4-201ENST00000523070 PIP4P2Q8N4L2 257 aa14.95□□□□□ -0.02
IGKV2-4-201ENST00000523070 MNX1P50219 401 aaPredicted RBP14.94□□□□□ -0.02
IGKV2-4-201ENST00000523070 PLEKHG5O94827 1062 aa14.93□□□□□ -0.02
IGKV2-4-201ENST00000523070 CHADLQ6NUI6 762 aa14.91□□□□□ -0.02
IGKV2-4-201ENST00000523070 PRKAR2AP13861 404 aaKnown RBP14.89□□□□□ -0.03
IGKV2-4-201ENST00000523070 ZBTB47Q9UFB7 747 aaPredicted RBP14.88□□□□□ -0.03
IGKV2-4-201ENST00000523070 CC2D2AQ9P2K1 1620 aa14.87□□□□□ -0.03
IGKV2-4-201ENST00000523070 KLHL34Q8N239 644 aa14.86□□□□□ -0.03
IGKV2-4-201ENST00000523070 BICRAQ9NZM4 1560 aa14.82□□□□□ -0.04
IGKV2-4-201ENST00000523070 SPOCK2Q92563 424 aa14.82□□□□□ -0.04
IGKV2-4-201ENST00000523070 UNC13AQ9UPW8 1703 aa14.8□□□□□ -0.04
IGKV2-4-201ENST00000523070 FARP1Q9Y4F1 1045 aaPredicted RBP14.8□□□□□ -0.04
IGKV2-4-201ENST00000523070 NUBP1P53384 320 aa14.75□□□□□ -0.05
IGKV2-4-201ENST00000523070 AMER1Q5JTC6 1135 aaPredicted RBP14.74□□□□□ -0.05
IGKV2-4-201ENST00000523070 NACADO15069 1562 aa14.73□□□□□ -0.05
IGKV2-4-201ENST00000523070 NPM1P06748 294 aaKnown RBP eCLIP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms