RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 AEBP2Q6ZN18 517 aaPredicted RBP20.86■□□□□ 0.93
SPIDR-216ENST00000521918 CHIC1Q5VXU3 224 aa20.35■□□□□ 0.85
SPIDR-216ENST00000521918 PHF23Q9BUL5 403 aaPredicted RBP17.95■□□□□ 0.46
SPIDR-216ENST00000521918 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
SPIDR-216ENST00000521918 PLPPR3Q6T4P5 718 aa16.55■□□□□ 0.24
SPIDR-216ENST00000521918 FOXD1Q16676 465 aa16.44■□□□□ 0.22
SPIDR-216ENST00000521918 PPP6R1Q9UPN7 881 aa15.8■□□□□ 0.12
SPIDR-216ENST00000521918 ADRA2BP18089 450 aa15.76■□□□□ 0.11
SPIDR-216ENST00000521918 PIAS4Q8N2W9 510 aaPredicted RBP15.51■□□□□ 0.07
SPIDR-216ENST00000521918 MSH5O43196 834 aa15.2■□□□□ 0.02
SPIDR-216ENST00000521918 NISCHQ9Y2I1 1504 aa14.68□□□□□ -0.06
SPIDR-216ENST00000521918 PPP4R3CPQ6ZMV5 832 aa14.6□□□□□ -0.07
SPIDR-216ENST00000521918 SCAF1Q9H7N4 1312 aaKnown RBP14.44□□□□□ -0.1
SPIDR-216ENST00000521918 KCNA4P22459 653 aa14.4□□□□□ -0.1
SPIDR-216ENST00000521918 MAPK8IP2Q13387 824 aaPredicted RBP14.3□□□□□ -0.12
SPIDR-216ENST00000521918 NCBP3Q53F19 620 aaKnown RBP14.2□□□□□ -0.14
SPIDR-216ENST00000521918 CNKSR2Q8WXI2 1034 aa14.16□□□□□ -0.14
SPIDR-216ENST00000521918 DMRT2Q9Y5R5 561 aa14.14□□□□□ -0.15
SPIDR-216ENST00000521918 NPM3O75607 178 aaKnown RBP14.07□□□□□ -0.16
SPIDR-216ENST00000521918 POTEDQ86YR6 584 aa13.9□□□□□ -0.18
SPIDR-216ENST00000521918 RNF216Q9NWF9 866 aaPredicted RBP13.88□□□□□ -0.19
SPIDR-216ENST00000521918 HOXD11P31277 338 aaPredicted RBP13.84□□□□□ -0.19
SPIDR-216ENST00000521918 SLC4A1APQ9BWU0 796 aaKnown RBP13.7□□□□□ -0.22
SPIDR-216ENST00000521918 DNAJC5BQ9UF47 199 aa13.68□□□□□ -0.22
SPIDR-216ENST00000521918 DCAF8L1A6NGE4 600 aa13.52□□□□□ -0.25
SPIDR-216ENST00000521918 EHMT2Q96KQ7 1210 aa13.43□□□□□ -0.26
SPIDR-216ENST00000521918 ZBTB22O15209 634 aa13.3□□□□□ -0.28
SPIDR-216ENST00000521918 SLC4A2P04920 1241 aa13.28□□□□□ -0.28
SPIDR-216ENST00000521918 CSRNP3Q8WYN3 585 aa13.28□□□□□ -0.28
SPIDR-216ENST00000521918 FOXD4L1Q9NU39 408 aa13.2□□□□□ -0.3
SPIDR-216ENST00000521918 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.17□□□□□ -0.32e-7■□□□□ 9.1
SPIDR-216ENST00000521918 CCDC180Q9P1Z9 1646 aa13.1□□□□□ -0.31
SPIDR-216ENST00000521918 RNF39Q9H2S5 420 aa13.01□□□□□ -0.33
SPIDR-216ENST00000521918 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.33
SPIDR-216ENST00000521918 U3KPZ7 1027 aaPredicted RBP12.96□□□□□ -0.33
SPIDR-216ENST00000521918 C1QBPQ07021 282 aaKnown RBP12.85□□□□□ -0.35
SPIDR-216ENST00000521918 ABCC9O60706 1549 aa12.83□□□□□ -0.35
SPIDR-216ENST00000521918 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.8□□□□□ -0.36
SPIDR-216ENST00000521918 HNRNPUL2Q1KMD3 747 aaKnown RBP12.8□□□□□ -0.36
SPIDR-216ENST00000521918 SAMD1Q6SPF0 538 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-216ENST00000521918 ATXN8OSP0DMR3 200 aa12.74□□□□□ -0.37
SPIDR-216ENST00000521918 CACNB1Q02641 598 aaPredicted RBP12.71□□□□□ -0.37
SPIDR-216ENST00000521918 APLP2Q06481 763 aa12.69□□□□□ -0.38
SPIDR-216ENST00000521918 ATF5Q9Y2D1 282 aaPredicted RBP12.67□□□□□ -0.38
SPIDR-216ENST00000521918 SPINK5Q9NQ38 1064 aaPredicted RBP12.6□□□□□ -0.39
SPIDR-216ENST00000521918 CAPN15O75808 1086 aa12.56□□□□□ -0.4
SPIDR-216ENST00000521918 ZNF219Q9P2Y4 722 aaPredicted RBP12.51□□□□□ -0.41
SPIDR-216ENST00000521918 TRHP20396 242 aaPredicted RBP12.48□□□□□ -0.41
SPIDR-216ENST00000521918 DSG3P32926 999 aa12.36□□□□□ -0.43
SPIDR-216ENST00000521918 RB1CC1Q8TDY2 1594 aa12.33□□□□□ -0.44
SPIDR-216ENST00000521918 NACADO15069 1562 aa12.31□□□□□ -0.44
SPIDR-216ENST00000521918 ABCB7O75027 752 aa12.31□□□□□ -0.44
SPIDR-216ENST00000521918 POLA2Q14181 598 aa12.27□□□□□ -0.45
SPIDR-216ENST00000521918 MYO15BQ96JP2 1530 aa12.27□□□□□ -0.45
SPIDR-216ENST00000521918 ZCCHC6Q5VYS8 1495 aaKnown RBP12.25□□□□□ -0.45
SPIDR-216ENST00000521918 DCAF1Q9Y4B6 1507 aa12.17□□□□□ -0.46
SPIDR-216ENST00000521918 MKRN4PQ13434 485 aaPredicted RBP12.12□□□□□ -0.47
SPIDR-216ENST00000521918 DCAF8L2P0C7V8 631 aa12.11□□□□□ -0.47
SPIDR-216ENST00000521918 ZBTB12Q9Y330 459 aaPredicted RBP12.1□□□□□ -0.47
SPIDR-216ENST00000521918 UNC13AQ9UPW8 1703 aa12.08□□□□□ -0.47
SPIDR-216ENST00000521918 FBLN2P98095 1184 aa12.03□□□□□ -0.48
SPIDR-216ENST00000521918 BICRAQ9NZM4 1560 aa12.02□□□□□ -0.49
SPIDR-216ENST00000521918 FKBP8Q14318 412 aa11.95□□□□□ -0.5
SPIDR-216ENST00000521918 PABPN1Q86U42 306 aaKnown RBP eCLIP11.94□□□□□ -0.5
SPIDR-216ENST00000521918 SCRIBQ14160 1630 aa11.91□□□□□ -0.5
SPIDR-216ENST00000521918 SHROOM4Q9ULL8 1493 aa11.89□□□□□ -0.51
SPIDR-216ENST00000521918 OSCARQ8IYS5 282 aa11.87□□□□□ -0.51
SPIDR-216ENST00000521918 SPDYE4A6NLX3 237 aa11.84□□□□□ -0.51
SPIDR-216ENST00000521918 RBM42Q9BTD8 480 aaKnown RBP11.81□□□□□ -0.52
SPIDR-216ENST00000521918 SPDYE2BA6NHP3 402 aa11.77□□□□□ -0.53
SPIDR-216ENST00000521918 SPDYE6P0CI01 402 aa11.77□□□□□ -0.53
SPIDR-216ENST00000521918 SPDYE2Q495Y8 402 aa11.77□□□□□ -0.53
SPIDR-216ENST00000521918 PROM2Q8N271 834 aa11.73□□□□□ -0.53
SPIDR-216ENST00000521918 ZNF692Q9BU19 519 aaPredicted RBP11.71□□□□□ -0.53
SPIDR-216ENST00000521918 SSUH2Q9Y2M2 353 aa11.71□□□□□ -0.53
SPIDR-216ENST00000521918 EIF4G1Q04637 1599 aaKnown RBP11.68□□□□□ -0.54
SPIDR-216ENST00000521918 AKT1S1Q96B36 256 aa11.64□□□□□ -0.55
SPIDR-216ENST00000521918 CC2D2AQ9P2K1 1620 aa11.63□□□□□ -0.55
SPIDR-216ENST00000521918 CECR2Q9BXF3 1484 aa11.55□□□□□ -0.56
SPIDR-216ENST00000521918 REM2Q8IYK8 340 aaPredicted RBP11.51□□□□□ -0.57
SPIDR-216ENST00000521918 FBXO3Q9UK99 471 aa11.47□□□□□ -0.57
SPIDR-216ENST00000521918 SPDYE1Q8NFV5 336 aaPredicted RBP11.42□□□□□ -0.58
SPIDR-216ENST00000521918 SMARCA4P51532 1647 aa11.42□□□□□ -0.58
SPIDR-216ENST00000521918 PITPNM1O00562 1244 aa11.39□□□□□ -0.59
SPIDR-216ENST00000521918 NCAPD3P42695 1498 aa11.37□□□□□ -0.59
SPIDR-216ENST00000521918 BAZ1AQ9NRL2 1556 aaPredicted RBP11.37□□□□□ -0.59
SPIDR-216ENST00000521918 STAG3Q9UJ98 1225 aa11.36□□□□□ -0.59
SPIDR-216ENST00000521918 ATAD2BQ9ULI0 1458 aa11.36□□□□□ -0.59
SPIDR-216ENST00000521918 CLEC11AQ9Y240 323 aa11.35□□□□□ -0.59
SPIDR-216ENST00000521918 PEG3Q9GZU2 1588 aa11.34□□□□□ -0.59
SPIDR-216ENST00000521918 VASPP50552 380 aaPredicted RBP11.34□□□□□ -0.59
SPIDR-216ENST00000521918 HMGXB3Q12766 1538 aa11.34□□□□□ -0.59
SPIDR-216ENST00000521918 SMARCA2P51531 1590 aa11.33□□□□□ -0.6
SPIDR-216ENST00000521918 CHRDL2Q6WN34 429 aa11.31□□□□□ -0.6
SPIDR-216ENST00000521918 MROH2BQ7Z745 1585 aa11.31□□□□□ -0.6
SPIDR-216ENST00000521918 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
SPIDR-216ENST00000521918 BAZ1BQ9UIG0 1483 aaKnown RBP11.24□□□□□ -0.61
SPIDR-216ENST00000521918 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-216ENST00000521918 FXR2P51116 673 aaKnown RBP eCLIP11.19□□□□□ -0.62
SPIDR-216ENST00000521918 MIER1Q8N108 512 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 1564.4 ms