RNA–Protein interactions for RNA: ENST00000521815.2

CASC19-202, Transcript of cancer susceptibility 19, humanhuman

TSL 3

Gene CASC19, Length 561 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-202ENST00000521815 AEBP2Q6ZN18 517 aaPredicted RBP24.34■■□□□ 1.49
CASC19-202ENST00000521815 CHIC1Q5VXU3 224 aa23.05■■□□□ 1.28
CASC19-202ENST00000521815 SENP3Q9H4L4 574 aaPredicted RBP20.55■□□□□ 0.88
CASC19-202ENST00000521815 PHF23Q9BUL5 403 aaPredicted RBP20.38■□□□□ 0.85
CASC19-202ENST00000521815 FOXD1Q16676 465 aa19.29■□□□□ 0.68
CASC19-202ENST00000521815 PLPPR3Q6T4P5 718 aa18.35■□□□□ 0.53
CASC19-202ENST00000521815 PPP6R1Q9UPN7 881 aa18.14■□□□□ 0.49
CASC19-202ENST00000521815 ADRA2BP18089 450 aa18.04■□□□□ 0.48
CASC19-202ENST00000521815 PIAS4Q8N2W9 510 aaPredicted RBP17.94■□□□□ 0.46
CASC19-202ENST00000521815 POTEDQ86YR6 584 aa17.91■□□□□ 0.46
CASC19-202ENST00000521815 MSH5O43196 834 aa17.86■□□□□ 0.45
CASC19-202ENST00000521815 MAPK8IP2Q13387 824 aaPredicted RBP16.59■□□□□ 0.25
CASC19-202ENST00000521815 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
CASC19-202ENST00000521815 SCAF1Q9H7N4 1312 aaKnown RBP16.28■□□□□ 0.2
CASC19-202ENST00000521815 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
CASC19-202ENST00000521815 HOXD11P31277 338 aaPredicted RBP15.79■□□□□ 0.12
CASC19-202ENST00000521815 CNKSR2Q8WXI2 1034 aa15.79■□□□□ 0.12
CASC19-202ENST00000521815 RNF216Q9NWF9 866 aaPredicted RBP15.64■□□□□ 0.09
CASC19-202ENST00000521815 DCAF8L1A6NGE4 600 aa15.63■□□□□ 0.09
CASC19-202ENST00000521815 NCBP3Q53F19 620 aaKnown RBP15.42■□□□□ 0.06
CASC19-202ENST00000521815 NPM3O75607 178 aaKnown RBP15.36■□□□□ 0.05
CASC19-202ENST00000521815 CACNB1Q02641 598 aaPredicted RBP15.34■□□□□ 0.05
CASC19-202ENST00000521815 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
CASC19-202ENST00000521815 KCNA4P22459 653 aa15.15■□□□□ 0.02
CASC19-202ENST00000521815 DNAJC5BQ9UF47 199 aa15.14■□□□□ 0.01
CASC19-202ENST00000521815 C1QBPQ07021 282 aaKnown RBP15.04■□□□□ -0
CASC19-202ENST00000521815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.97□□□□□ -0.01
CASC19-202ENST00000521815 U3KPZ7 1027 aaPredicted RBP14.77□□□□□ -0.05
CASC19-202ENST00000521815 SLC4A2P04920 1241 aa14.72□□□□□ -0.05
CASC19-202ENST00000521815 SPINK5Q9NQ38 1064 aaPredicted RBP14.57□□□□□ -0.08
CASC19-202ENST00000521815 CAPN15O75808 1086 aa14.42□□□□□ -0.1
CASC19-202ENST00000521815 DSG3P32926 999 aa14.4□□□□□ -0.1
CASC19-202ENST00000521815 TRHP20396 242 aaPredicted RBP14.23□□□□□ -0.13
CASC19-202ENST00000521815 SLC4A1APQ9BWU0 796 aaKnown RBP14.22□□□□□ -0.13
CASC19-202ENST00000521815 ABCB7O75027 752 aa14.17□□□□□ -0.14
CASC19-202ENST00000521815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.15□□□□□ -0.14
CASC19-202ENST00000521815 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
CASC19-202ENST00000521815 SAMD1Q6SPF0 538 aaPredicted RBP14.13□□□□□ -0.15
CASC19-202ENST00000521815 ZNF219Q9P2Y4 722 aaPredicted RBP14.12□□□□□ -0.15
CASC19-202ENST00000521815 MYCNP04198 464 aaPredicted RBP14.11□□□□□ -0.15
CASC19-202ENST00000521815 APLP2Q06481 763 aa14.11□□□□□ -0.15
CASC19-202ENST00000521815 FOXD4L1Q9NU39 408 aa14.02□□□□□ -0.17
CASC19-202ENST00000521815 ZBTB22O15209 634 aa13.99□□□□□ -0.17
CASC19-202ENST00000521815 ATF5Q9Y2D1 282 aaPredicted RBP13.96□□□□□ -0.17
CASC19-202ENST00000521815 POLA2Q14181 598 aa13.88□□□□□ -0.19
CASC19-202ENST00000521815 POTEHQ6S545 545 aa13.83□□□□□ -0.2
CASC19-202ENST00000521815 RBM42Q9BTD8 480 aaKnown RBP13.58□□□□□ -0.24
CASC19-202ENST00000521815 ATXN8OSP0DMR3 200 aa13.53□□□□□ -0.24
CASC19-202ENST00000521815 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
CASC19-202ENST00000521815 ZBTB12Q9Y330 459 aaPredicted RBP13.45□□□□□ -0.26
CASC19-202ENST00000521815 CHRDL2Q6WN34 429 aa13.37□□□□□ -0.27
CASC19-202ENST00000521815 CSRNP3Q8WYN3 585 aa13.35□□□□□ -0.27
CASC19-202ENST00000521815 AKT1S1Q96B36 256 aa13.35□□□□□ -0.27
CASC19-202ENST00000521815 MKRN4PQ13434 485 aaPredicted RBP13.3□□□□□ -0.28
CASC19-202ENST00000521815 REM2Q8IYK8 340 aaPredicted RBP13.29□□□□□ -0.28
CASC19-202ENST00000521815 FBLN2P98095 1184 aa13.18□□□□□ -0.3
CASC19-202ENST00000521815 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
CASC19-202ENST00000521815 EHMT2Q96KQ7 1210 aa13.14□□□□□ -0.31
CASC19-202ENST00000521815 SPDYE2BA6NHP3 402 aa13.12□□□□□ -0.31
CASC19-202ENST00000521815 SPDYE6P0CI01 402 aa13.12□□□□□ -0.31
CASC19-202ENST00000521815 SPDYE2Q495Y8 402 aa13.12□□□□□ -0.31
CASC19-202ENST00000521815 PIP4P2Q8N4L2 257 aa13.11□□□□□ -0.31
CASC19-202ENST00000521815 FXR2P51116 673 aaKnown RBP eCLIP13.03□□□□□ -0.32
CASC19-202ENST00000521815 SSUH2Q9Y2M2 353 aa13.02□□□□□ -0.33
CASC19-202ENST00000521815 ZNF692Q9BU19 519 aaPredicted RBP12.98□□□□□ -0.33
CASC19-202ENST00000521815 CLEC11AQ9Y240 323 aa12.88□□□□□ -0.35
CASC19-202ENST00000521815 SPDYE1Q8NFV5 336 aaPredicted RBP12.86□□□□□ -0.35
CASC19-202ENST00000521815 PABPN1Q86U42 306 aaKnown RBP eCLIP12.84□□□□□ -0.35
CASC19-202ENST00000521815 EVX2Q03828 476 aa12.82□□□□□ -0.36
CASC19-202ENST00000521815 SP7Q8TDD2 431 aaPredicted RBP12.82□□□□□ -0.36
CASC19-202ENST00000521815 HAX1O00165 279 aa12.79□□□□□ -0.36
CASC19-202ENST00000521815 PRKAR2AP13861 404 aaKnown RBP12.79□□□□□ -0.36
CASC19-202ENST00000521815 CHADLQ6NUI6 762 aa12.72□□□□□ -0.37
CASC19-202ENST00000521815 PRR29P0C7W0 189 aa12.65□□□□□ -0.38
CASC19-202ENST00000521815 C19orf67A6NJJ6 358 aa12.61□□□□□ -0.39
CASC19-202ENST00000521815 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
CASC19-202ENST00000521815 FARP1Q9Y4F1 1045 aaPredicted RBP12.48□□□□□ -0.41
CASC19-202ENST00000521815 CREBZFQ9NS37 354 aa12.45□□□□□ -0.42
CASC19-202ENST00000521815 GABBR2O75899 941 aa12.41□□□□□ -0.42
CASC19-202ENST00000521815 CD44P16070 742 aaKnown RBP12.37□□□□□ -0.43
CASC19-202ENST00000521815 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
CASC19-202ENST00000521815 PROM2Q8N271 834 aa12.35□□□□□ -0.43
CASC19-202ENST00000521815 MNX1P50219 401 aaPredicted RBP12.28□□□□□ -0.44
CASC19-202ENST00000521815 POTEIP0CG38 1075 aa12.25□□□□□ -0.45
CASC19-202ENST00000521815 ZRANB1Q9UGI0 708 aa12.21□□□□□ -0.45
CASC19-202ENST00000521815 ZNF579Q8NAF0 562 aaKnown RBP12.19□□□□□ -0.46
CASC19-202ENST00000521815 PHF12Q96QT6 1004 aa12.11□□□□□ -0.47
CASC19-202ENST00000521815 GALR2O43603 387 aaPredicted RBP12.1□□□□□ -0.47
CASC19-202ENST00000521815 NPM1P06748 294 aaKnown RBP eCLIP12.06□□□□□ -0.48
CASC19-202ENST00000521815 CLCN6P51797 869 aa12.05□□□□□ -0.48
CASC19-202ENST00000521815 FKBP8Q14318 412 aa12.03□□□□□ -0.48
CASC19-202ENST00000521815 LHX8Q68G74 356 aa12.03□□□□□ -0.48
CASC19-202ENST00000521815 PLSCR2Q9NRY7 297 aa12.03□□□□□ -0.48
CASC19-202ENST00000521815 PAK3O75914 559 aaPredicted RBP11.99□□□□□ -0.49
CASC19-202ENST00000521815 DCBLD2Q96PD2 775 aa11.99□□□□□ -0.49
CASC19-202ENST00000521815 MIER1Q8N108 512 aa11.97□□□□□ -0.49
CASC19-202ENST00000521815 TSPYL2Q9H2G4 693 aaPredicted RBP11.96□□□□□ -0.49
CASC19-202ENST00000521815 MS4A3Q96HJ5 214 aa11.93□□□□□ -0.5
CASC19-202ENST00000521815 CCDC61Q9Y6R9 512 aa11.93□□□□□ -0.5
CASC19-202ENST00000521815 RASEFQ8IZ41 740 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms