RNA–Protein interactions for RNA: ENST00000521379.1

CRNKL1-206, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 5

Gene CRNKL1, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-206ENST00000521379 AEBP2Q6ZN18 517 aaPredicted RBP32.14■■■□□ 2.74
CRNKL1-206ENST00000521379 CHIC1Q5VXU3 224 aa31.49■■■□□ 2.63
CRNKL1-206ENST00000521379 PHF23Q9BUL5 403 aaPredicted RBP27.7■■■□□ 2.02
CRNKL1-206ENST00000521379 SENP3Q9H4L4 574 aaPredicted RBP27.24■■□□□ 1.95
CRNKL1-206ENST00000521379 PLPPR3Q6T4P5 718 aa25.6■■□□□ 1.69
CRNKL1-206ENST00000521379 FOXD1Q16676 465 aa25.27■■□□□ 1.64
CRNKL1-206ENST00000521379 PPP6R1Q9UPN7 881 aa24.39■■□□□ 1.49
CRNKL1-206ENST00000521379 ADRA2BP18089 450 aa24.34■■□□□ 1.49
CRNKL1-206ENST00000521379 PIAS4Q8N2W9 510 aaPredicted RBP23.82■■□□□ 1.4
CRNKL1-206ENST00000521379 MSH5O43196 834 aa23.27■■□□□ 1.32
CRNKL1-206ENST00000521379 PPP4R3CPQ6ZMV5 832 aa22.55■■□□□ 1.2
CRNKL1-206ENST00000521379 SCAF1Q9H7N4 1312 aaKnown RBP22.29■■□□□ 1.16
CRNKL1-206ENST00000521379 KCNA4P22459 653 aa22.13■■□□□ 1.13
CRNKL1-206ENST00000521379 MAPK8IP2Q13387 824 aaPredicted RBP22.05■■□□□ 1.12
CRNKL1-206ENST00000521379 NCBP3Q53F19 620 aaKnown RBP21.98■■□□□ 1.11
CRNKL1-206ENST00000521379 CNKSR2Q8WXI2 1034 aa21.92■■□□□ 1.1
CRNKL1-206ENST00000521379 DMRT2Q9Y5R5 561 aa21.78■■□□□ 1.08
CRNKL1-206ENST00000521379 NPM3O75607 178 aaKnown RBP21.68■■□□□ 1.06
CRNKL1-206ENST00000521379 RNF216Q9NWF9 866 aaPredicted RBP21.49■■□□□ 1.03
CRNKL1-206ENST00000521379 HOXD11P31277 338 aaPredicted RBP21.39■■□□□ 1.01
CRNKL1-206ENST00000521379 DNAJC5BQ9UF47 199 aa21.17■□□□□ 0.98
CRNKL1-206ENST00000521379 SLC4A1APQ9BWU0 796 aaKnown RBP21.08■□□□□ 0.97
CRNKL1-206ENST00000521379 POTEDQ86YR6 584 aa21■□□□□ 0.95
CRNKL1-206ENST00000521379 DCAF8L1A6NGE4 600 aa20.7■□□□□ 0.9
CRNKL1-206ENST00000521379 EHMT2Q96KQ7 1210 aa20.54■□□□□ 0.88
CRNKL1-206ENST00000521379 SLC4A2P04920 1241 aa20.47■□□□□ 0.87
CRNKL1-206ENST00000521379 ZBTB22O15209 634 aa20.39■□□□□ 0.85
CRNKL1-206ENST00000521379 FOXD4L1Q9NU39 408 aa20.36■□□□□ 0.85
CRNKL1-206ENST00000521379 CSRNP3Q8WYN3 585 aa20.35■□□□□ 0.85
CRNKL1-206ENST00000521379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.29■□□□□ 0.842e-6■■■■□ 20.9
CRNKL1-206ENST00000521379 MYCNP04198 464 aaPredicted RBP20.03■□□□□ 0.8
CRNKL1-206ENST00000521379 U3KPZ7 1027 aaPredicted RBP20.03■□□□□ 0.8
CRNKL1-206ENST00000521379 RNF39Q9H2S5 420 aa19.96■□□□□ 0.79
CRNKL1-206ENST00000521379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.81■□□□□ 0.76
CRNKL1-206ENST00000521379 HNRNPUL2Q1KMD3 747 aaKnown RBP19.81■□□□□ 0.76
CRNKL1-206ENST00000521379 SAMD1Q6SPF0 538 aaPredicted RBP19.74■□□□□ 0.75
CRNKL1-206ENST00000521379 C1QBPQ07021 282 aaKnown RBP19.73■□□□□ 0.75
CRNKL1-206ENST00000521379 ATXN8OSP0DMR3 200 aa19.68■□□□□ 0.74
CRNKL1-206ENST00000521379 APLP2Q06481 763 aa19.56■□□□□ 0.72
CRNKL1-206ENST00000521379 ATF5Q9Y2D1 282 aaPredicted RBP19.48■□□□□ 0.71
CRNKL1-206ENST00000521379 SPINK5Q9NQ38 1064 aaPredicted RBP19.41■□□□□ 0.7
CRNKL1-206ENST00000521379 CACNB1Q02641 598 aaPredicted RBP19.3■□□□□ 0.68
CRNKL1-206ENST00000521379 CAPN15O75808 1086 aa19.29■□□□□ 0.68
CRNKL1-206ENST00000521379 ZNF219Q9P2Y4 722 aaPredicted RBP19.29■□□□□ 0.68
CRNKL1-206ENST00000521379 TRHP20396 242 aaPredicted RBP19.22■□□□□ 0.67
CRNKL1-206ENST00000521379 DSG3P32926 999 aa19.02■□□□□ 0.64
CRNKL1-206ENST00000521379 POLA2Q14181 598 aa18.96■□□□□ 0.63
CRNKL1-206ENST00000521379 ABCB7O75027 752 aa18.93■□□□□ 0.62
CRNKL1-206ENST00000521379 ZBTB12Q9Y330 459 aaPredicted RBP18.7■□□□□ 0.58
CRNKL1-206ENST00000521379 MKRN4PQ13434 485 aaPredicted RBP18.66■□□□□ 0.58
CRNKL1-206ENST00000521379 FBLN2P98095 1184 aa18.63■□□□□ 0.57
CRNKL1-206ENST00000521379 FKBP8Q14318 412 aa18.34■□□□□ 0.53
CRNKL1-206ENST00000521379 OSCARQ8IYS5 282 aa18.32■□□□□ 0.52
CRNKL1-206ENST00000521379 SPDYE4A6NLX3 237 aa18.25■□□□□ 0.51
CRNKL1-206ENST00000521379 SPDYE2BA6NHP3 402 aa18.21■□□□□ 0.51
CRNKL1-206ENST00000521379 SPDYE6P0CI01 402 aa18.21■□□□□ 0.51
CRNKL1-206ENST00000521379 SPDYE2Q495Y8 402 aa18.21■□□□□ 0.51
CRNKL1-206ENST00000521379 RBM42Q9BTD8 480 aaKnown RBP18.11■□□□□ 0.49
CRNKL1-206ENST00000521379 ZNF692Q9BU19 519 aaPredicted RBP18.1■□□□□ 0.49
CRNKL1-206ENST00000521379 SSUH2Q9Y2M2 353 aa18.1■□□□□ 0.49
CRNKL1-206ENST00000521379 PROM2Q8N271 834 aa18.06■□□□□ 0.48
CRNKL1-206ENST00000521379 AKT1S1Q96B36 256 aa17.92■□□□□ 0.46
CRNKL1-206ENST00000521379 PABPN1Q86U42 306 aaKnown RBP eCLIP17.88■□□□□ 0.45
CRNKL1-206ENST00000521379 REM2Q8IYK8 340 aaPredicted RBP17.73■□□□□ 0.43
CRNKL1-206ENST00000521379 FBXO3Q9UK99 471 aa17.69■□□□□ 0.42
CRNKL1-206ENST00000521379 SPDYE1Q8NFV5 336 aaPredicted RBP17.63■□□□□ 0.41
CRNKL1-206ENST00000521379 STAG3Q9UJ98 1225 aa17.62■□□□□ 0.41
CRNKL1-206ENST00000521379 PITPNM1O00562 1244 aa17.52■□□□□ 0.4
CRNKL1-206ENST00000521379 CLEC11AQ9Y240 323 aa17.48■□□□□ 0.39
CRNKL1-206ENST00000521379 VASPP50552 380 aaPredicted RBP17.46■□□□□ 0.39
CRNKL1-206ENST00000521379 PRR29P0C7W0 189 aa17.37■□□□□ 0.37
CRNKL1-206ENST00000521379 CHRDL2Q6WN34 429 aa17.3■□□□□ 0.36
CRNKL1-206ENST00000521379 MIER1Q8N108 512 aa17.25■□□□□ 0.35
CRNKL1-206ENST00000521379 PLCD3Q8N3E9 789 aa17.25■□□□□ 0.35
CRNKL1-206ENST00000521379 IFNLR1Q8IU57 520 aaPredicted RBP17.23■□□□□ 0.35
CRNKL1-206ENST00000521379 CREBZFQ9NS37 354 aa17.22■□□□□ 0.35
CRNKL1-206ENST00000521379 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.35
CRNKL1-206ENST00000521379 PLEKHG5O94827 1062 aa17.17■□□□□ 0.34
CRNKL1-206ENST00000521379 PIP4P2Q8N4L2 257 aa17.12■□□□□ 0.33
CRNKL1-206ENST00000521379 ZBTB47Q9UFB7 747 aaPredicted RBP17.09■□□□□ 0.33
CRNKL1-206ENST00000521379 MNX1P50219 401 aaPredicted RBP17.08■□□□□ 0.32
CRNKL1-206ENST00000521379 PRKAR2AP13861 404 aaKnown RBP17.06■□□□□ 0.32
CRNKL1-206ENST00000521379 CHADLQ6NUI6 762 aa17.06■□□□□ 0.32
CRNKL1-206ENST00000521379 KLHL34Q8N239 644 aa17.06■□□□□ 0.32
CRNKL1-206ENST00000521379 SPOCK2Q92563 424 aa16.99■□□□□ 0.31
CRNKL1-206ENST00000521379 FARP1Q9Y4F1 1045 aaPredicted RBP16.95■□□□□ 0.3
CRNKL1-206ENST00000521379 AMER1Q5JTC6 1135 aaPredicted RBP16.91■□□□□ 0.3
CRNKL1-206ENST00000521379 NPM1P06748 294 aaKnown RBP eCLIP16.9■□□□□ 0.3
CRNKL1-206ENST00000521379 NUBP1P53384 320 aa16.88■□□□□ 0.29
CRNKL1-206ENST00000521379 RTN4Q9NQC3 1192 aaKnown RBP16.84■□□□□ 0.29
CRNKL1-206ENST00000521379 RASEFQ8IZ41 740 aa16.76■□□□□ 0.27
CRNKL1-206ENST00000521379 PKD2Q13563 968 aa16.7■□□□□ 0.26
CRNKL1-206ENST00000521379 GSE1Q14687 1217 aa16.7■□□□□ 0.26
CRNKL1-206ENST00000521379 FAM212AQ96EL1 285 aa16.7■□□□□ 0.26
CRNKL1-206ENST00000521379 POTEHQ6S545 545 aa16.66■□□□□ 0.26
CRNKL1-206ENST00000521379 CIZ1Q9ULV3 898 aaPredicted RBP16.66■□□□□ 0.26
CRNKL1-206ENST00000521379 DCAF8Q5TAQ9 597 aa16.64■□□□□ 0.25
CRNKL1-206ENST00000521379 C19orf67A6NJJ6 358 aa16.61■□□□□ 0.25
CRNKL1-206ENST00000521379 TRIM41Q8WV44 630 aa16.59■□□□□ 0.25
CRNKL1-206ENST00000521379 TSPYL2Q9H2G4 693 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms