RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 CHIC1Q5VXU3 224 aa12.82□□□□□ -0.36
NPM1-207ENST00000521260 AEBP2Q6ZN18 517 aaPredicted RBP12.67□□□□□ -0.38
NPM1-207ENST00000521260 PHF23Q9BUL5 403 aaPredicted RBP11.35□□□□□ -0.59
NPM1-207ENST00000521260 SENP3Q9H4L4 574 aaPredicted RBP10.63□□□□□ -0.71
NPM1-207ENST00000521260 PLPPR3Q6T4P5 718 aa10.58□□□□□ -0.72
NPM1-207ENST00000521260 ADRA2BP18089 450 aa9.91□□□□□ -0.82
NPM1-207ENST00000521260 PPP6R1Q9UPN7 881 aa9.84□□□□□ -0.83
NPM1-207ENST00000521260 FOXD1Q16676 465 aa9.83□□□□□ -0.84
NPM1-207ENST00000521260 KCNA4P22459 653 aa9.72□□□□□ -0.85
NPM1-207ENST00000521260 EHMT2Q96KQ7 1210 aa9.51□□□□□ -0.89
NPM1-207ENST00000521260 MYT1Q01538 1121 aa9.5□□□□□ -0.89
NPM1-207ENST00000521260 PELP1Q8IZL8 1130 aaKnown RBP9.49□□□□□ -0.89
NPM1-207ENST00000521260 PPP4R3CPQ6ZMV5 832 aa9.38□□□□□ -0.91
NPM1-207ENST00000521260 PIAS4Q8N2W9 510 aaPredicted RBP9.32□□□□□ -0.92
NPM1-207ENST00000521260 CSRNP3Q8WYN3 585 aa9.31□□□□□ -0.92
NPM1-207ENST00000521260 SLC4A1APQ9BWU0 796 aaKnown RBP9.29□□□□□ -0.92
NPM1-207ENST00000521260 NCBP3Q53F19 620 aaKnown RBP9.24□□□□□ -0.93
NPM1-207ENST00000521260 NPM3O75607 178 aaKnown RBP9.17□□□□□ -0.94
NPM1-207ENST00000521260 TTBK1Q5TCY1 1321 aaPredicted RBP9.15□□□□□ -0.94
NPM1-207ENST00000521260 POTEDQ86YR6 584 aa9.13□□□□□ -0.95
NPM1-207ENST00000521260 CNKSR2Q8WXI2 1034 aa9.03□□□□□ -0.96
NPM1-207ENST00000521260 ZBTB22O15209 634 aa8.99□□□□□ -0.97
NPM1-207ENST00000521260 DNAJC5BQ9UF47 199 aa8.98□□□□□ -0.97
NPM1-207ENST00000521260 SCAF1Q9H7N4 1312 aaKnown RBP8.94□□□□□ -0.98
NPM1-207ENST00000521260 MSH5O43196 834 aa8.85□□□□□ -0.99
NPM1-207ENST00000521260 FOXD4L1Q9NU39 408 aa8.8□□□□□ -1
NPM1-207ENST00000521260 MAPK8IP2Q13387 824 aaPredicted RBP8.76□□□□□ -1.01
NPM1-207ENST00000521260 RNF216Q9NWF9 866 aaPredicted RBP8.76□□□□□ -1.01
NPM1-207ENST00000521260 HOXD11P31277 338 aaPredicted RBP8.63□□□□□ -1.03
NPM1-207ENST00000521260 ERICH6Q7L0X2 663 aa8.61□□□□□ -1.03
NPM1-207ENST00000521260 DMRT2Q9Y5R5 561 aa8.59□□□□□ -1.03
NPM1-207ENST00000521260 SLC4A2P04920 1241 aa8.57□□□□□ -1.04
NPM1-207ENST00000521260 ATXN8OSP0DMR3 200 aa8.49□□□□□ -1.05
NPM1-207ENST00000521260 MYCNP04198 464 aaPredicted RBP8.44□□□□□ -1.06
NPM1-207ENST00000521260 HRCP23327 699 aa8.44□□□□□ -1.06
NPM1-207ENST00000521260 RTN4Q9NQC3 1192 aaKnown RBP8.44□□□□□ -1.06
NPM1-207ENST00000521260 AMER1Q5JTC6 1135 aaPredicted RBP8.43□□□□□ -1.06
NPM1-207ENST00000521260 SLC24A1O60721 1099 aa8.36□□□□□ -1.07
NPM1-207ENST00000521260 FKBP8Q14318 412 aa8.31□□□□□ -1.08
NPM1-207ENST00000521260 APLP2Q06481 763 aa8.29□□□□□ -1.08
NPM1-207ENST00000521260 PRKCSHP14314 528 aaPredicted RBP8.22□□□□□ -1.09
NPM1-207ENST00000521260 CENPBP07199 599 aaPredicted RBP8.21□□□□□ -1.1
NPM1-207ENST00000521260 ATF5Q9Y2D1 282 aaPredicted RBP8.2□□□□□ -1.1
NPM1-207ENST00000521260 BCL11AQ9H165 835 aa8.13□□□□□ -1.11
NPM1-207ENST00000521260 SAMD1Q6SPF0 538 aaPredicted RBP8.12□□□□□ -1.11
NPM1-207ENST00000521260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.11□□□□□ -1.11
NPM1-207ENST00000521260 HNRNPUL2Q1KMD3 747 aaKnown RBP8.11□□□□□ -1.11
NPM1-207ENST00000521260 U3KPZ7 1027 aaPredicted RBP8.11□□□□□ -1.11
NPM1-207ENST00000521260 ZEB1P37275 1124 aaPredicted RBP8.1□□□□□ -1.11
NPM1-207ENST00000521260 DAXXQ9UER7 740 aaPredicted RBP8.1□□□□□ -1.11
NPM1-207ENST00000521260 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.08□□□□□ -1.121e-19■□□□□ 11.1
NPM1-207ENST00000521260 DCAF8L1A6NGE4 600 aa8.01□□□□□ -1.13
NPM1-207ENST00000521260 ZNF219Q9P2Y4 722 aaPredicted RBP7.98□□□□□ -1.13
NPM1-207ENST00000521260 PROM2Q8N271 834 aa7.95□□□□□ -1.14
NPM1-207ENST00000521260 ACIN1Q9UKV3 1341 aaKnown RBP7.95□□□□□ -1.14
NPM1-207ENST00000521260 FBXO3Q9UK99 471 aa7.9□□□□□ -1.14
NPM1-207ENST00000521260 MKRN4PQ13434 485 aaPredicted RBP7.89□□□□□ -1.15
NPM1-207ENST00000521260 FAM9AQ8IZU1 332 aaPredicted RBP7.88□□□□□ -1.15
NPM1-207ENST00000521260 ANP32EQ9BTT0 268 aa7.88□□□□□ -1.15
NPM1-207ENST00000521260 SPDYE4A6NLX3 237 aa7.87□□□□□ -1.15
NPM1-207ENST00000521260 CLSPNQ9HAW4 1339 aa7.85□□□□□ -1.15
NPM1-207ENST00000521260 EIF5BO60841 1220 aaKnown RBP7.85□□□□□ -1.15
NPM1-207ENST00000521260 MYT1LQ9UL68 1186 aa7.85□□□□□ -1.15
NPM1-207ENST00000521260 PPARGC1BQ86YN6 1023 aaKnown RBP7.81□□□□□ -1.16
NPM1-207ENST00000521260 VASPP50552 380 aaPredicted RBP7.8□□□□□ -1.16
NPM1-207ENST00000521260 PCGF6Q9BYE7 350 aa7.8□□□□□ -1.16
NPM1-207ENST00000521260 GTF3C3Q9Y5Q9 886 aa7.8□□□□□ -1.16
NPM1-207ENST00000521260 PLCB2Q00722 1185 aa7.78□□□□□ -1.16
NPM1-207ENST00000521260 CCDC180Q9P1Z9 1646 aa7.76□□□□□ -1.17
NPM1-207ENST00000521260 DCAF1Q9Y4B6 1507 aa7.76□□□□□ -1.17
NPM1-207ENST00000521260 IFNLR1Q8IU57 520 aaPredicted RBP7.75□□□□□ -1.17
NPM1-207ENST00000521260 FBLN2P98095 1184 aa7.74□□□□□ -1.17
NPM1-207ENST00000521260 UBE2Q2Q8WVN8 375 aa7.72□□□□□ -1.17
NPM1-207ENST00000521260 TRIM26Q12899 539 aaPredicted RBP7.7□□□□□ -1.18
NPM1-207ENST00000521260 ERICH6BQ5W0A0 696 aa7.7□□□□□ -1.18
NPM1-207ENST00000521260 SPINK5Q9NQ38 1064 aaPredicted RBP7.7□□□□□ -1.18
NPM1-207ENST00000521260 NEUROD1Q13562 356 aa7.69□□□□□ -1.18
NPM1-207ENST00000521260 PKD2Q13563 968 aa7.69□□□□□ -1.18
NPM1-207ENST00000521260 POLA2Q14181 598 aa7.69□□□□□ -1.18
NPM1-207ENST00000521260 RNF39Q9H2S5 420 aa7.66□□□□□ -1.18
NPM1-207ENST00000521260 TRHP20396 242 aaPredicted RBP7.65□□□□□ -1.18
NPM1-207ENST00000521260 NISCHQ9Y2I1 1504 aa7.62□□□□□ -1.19
NPM1-207ENST00000521260 RANGAP1P46060 587 aaPredicted RBP7.62□□□□□ -1.19
NPM1-207ENST00000521260 ZBTB12Q9Y330 459 aaPredicted RBP7.61□□□□□ -1.19
NPM1-207ENST00000521260 CAPN15O75808 1086 aa7.58□□□□□ -1.2
NPM1-207ENST00000521260 C1QBPQ07021 282 aaKnown RBP7.58□□□□□ -1.2
NPM1-207ENST00000521260 HAP1P54257 671 aaPredicted RBP7.57□□□□□ -1.2
NPM1-207ENST00000521260 VSIG10Q8N0Z9 540 aa7.57□□□□□ -1.2
NPM1-207ENST00000521260 GLIPR1L2Q4G1C9 344 aa7.54□□□□□ -1.2
NPM1-207ENST00000521260 SPOCK2Q92563 424 aa7.54□□□□□ -1.2
NPM1-207ENST00000521260 CCER1Q8TC90 406 aaPredicted RBP7.53□□□□□ -1.2
NPM1-207ENST00000521260 BBXQ8WY36 941 aaPredicted RBP7.52□□□□□ -1.21
NPM1-207ENST00000521260 BCANQ96GW7 911 aa7.52□□□□□ -1.21
NPM1-207ENST00000521260 STAG3Q9UJ98 1225 aa7.52□□□□□ -1.21
NPM1-207ENST00000521260 NEFLP07196 543 aa7.51□□□□□ -1.21
NPM1-207ENST00000521260 DCAF8L2P0C7V8 631 aa7.51□□□□□ -1.21
NPM1-207ENST00000521260 SSUH2Q9Y2M2 353 aa7.51□□□□□ -1.21
NPM1-207ENST00000521260 NPM1P06748 294 aaKnown RBP eCLIP7.5□□□□□ -1.21
NPM1-207ENST00000521260 DIEXFQ68CQ4 756 aaKnown RBP7.5□□□□□ -1.21
NPM1-207ENST00000521260 ABCB7O75027 752 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms