RNA–Protein interactions for RNA: ENST00000520358.6

TSPAN18-207, Transcript of tetraspanin 18, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN18, Length 3,316 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-207ENST00000520358 NISCHQ9Y2I1 1504 aa29.97■■■□□ 2.39
TSPAN18-207ENST00000520358 SHROOM4Q9ULL8 1493 aa26.15■■□□□ 1.78
TSPAN18-207ENST00000520358 SUPT5HO00267 1087 aaKnown RBP25.71■■□□□ 1.71
TSPAN18-207ENST00000520358 DCAF8L2P0C7V8 631 aa25.62■■□□□ 1.69
TSPAN18-207ENST00000520358 ZCCHC6Q5VYS8 1495 aaKnown RBP25.28■■□□□ 1.64
TSPAN18-207ENST00000520358 CCDC180Q9P1Z9 1646 aa25.16■■□□□ 1.62
TSPAN18-207ENST00000520358 CHIC1Q5VXU3 224 aa24.75■■□□□ 1.55
TSPAN18-207ENST00000520358 MYO15BQ96JP2 1530 aa24.55■■□□□ 1.52
TSPAN18-207ENST00000520358 DCAF1Q9Y4B6 1507 aa24.33■■□□□ 1.49
TSPAN18-207ENST00000520358 LOC105371045A0A1W2PR82 267 aa24.24■■□□□ 1.47
TSPAN18-207ENST00000520358 PCGF6Q9BYE7 350 aa24.22■■□□□ 1.47
TSPAN18-207ENST00000520358 SCRIBQ14160 1630 aa24.01■■□□□ 1.43
TSPAN18-207ENST00000520358 HRCP23327 699 aa23.99■■□□□ 1.43
TSPAN18-207ENST00000520358 ABCC9O60706 1549 aa23.89■■□□□ 1.42
TSPAN18-207ENST00000520358 RSF1Q96T23 1441 aaPredicted RBP23.86■■□□□ 1.41
TSPAN18-207ENST00000520358 FAM9AQ8IZU1 332 aaPredicted RBP23.85■■□□□ 1.41
TSPAN18-207ENST00000520358 EHMT2Q96KQ7 1210 aa23.84■■□□□ 1.41
TSPAN18-207ENST00000520358 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
TSPAN18-207ENST00000520358 PPARGC1BQ86YN6 1023 aaKnown RBP23.77■■□□□ 1.4
TSPAN18-207ENST00000520358 CECR2Q9BXF3 1484 aa23.59■■□□□ 1.37
TSPAN18-207ENST00000520358 RB1CC1Q8TDY2 1594 aa23.56■■□□□ 1.36
TSPAN18-207ENST00000520358 TRIM26Q12899 539 aaPredicted RBP23.53■■□□□ 1.36
TSPAN18-207ENST00000520358 NACADO15069 1562 aa23.42■■□□□ 1.34
TSPAN18-207ENST00000520358 MROH2BQ7Z745 1585 aa23.41■■□□□ 1.34
TSPAN18-207ENST00000520358 WIZO95785 1651 aa23.25■■□□□ 1.31
TSPAN18-207ENST00000520358 PABPN1Q86U42 306 aaKnown RBP eCLIP23.08■■□□□ 1.29
TSPAN18-207ENST00000520358 TTBK1Q5TCY1 1321 aaPredicted RBP23.02■■□□□ 1.28
TSPAN18-207ENST00000520358 BAZ1AQ9NRL2 1556 aaPredicted RBP22.98■■□□□ 1.27
TSPAN18-207ENST00000520358 ZEB1P37275 1124 aaPredicted RBP22.91■■□□□ 1.26
TSPAN18-207ENST00000520358 ABCC8Q09428 1581 aa22.87■■□□□ 1.25
TSPAN18-207ENST00000520358 CCDC88BA6NC98 1476 aa22.84■■□□□ 1.25
TSPAN18-207ENST00000520358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.81■■□□□ 1.24
TSPAN18-207ENST00000520358 SMARCA4P51532 1647 aa22.77■■□□□ 1.24
TSPAN18-207ENST00000520358 UBTFP17480 764 aaKnown RBP22.75■■□□□ 1.23
TSPAN18-207ENST00000520358 TOP2AP11388 1531 aaKnown RBP22.75■■□□□ 1.23
TSPAN18-207ENST00000520358 SOGA1O94964 1423 aa22.72■■□□□ 1.23
TSPAN18-207ENST00000520358 CCER1Q8TC90 406 aaPredicted RBP22.7■■□□□ 1.23
TSPAN18-207ENST00000520358 SMARCA2P51531 1590 aa22.68■■□□□ 1.22
TSPAN18-207ENST00000520358 EIF4G1Q04637 1599 aaKnown RBP22.67■■□□□ 1.22
TSPAN18-207ENST00000520358 CSRNP3Q8WYN3 585 aa22.64■■□□□ 1.22
TSPAN18-207ENST00000520358 UNC13AQ9UPW8 1703 aa22.64■■□□□ 1.22
TSPAN18-207ENST00000520358 RUSC2Q8N2Y8 1516 aa22.62■■□□□ 1.21
TSPAN18-207ENST00000520358 RANGAP1P46060 587 aaPredicted RBP22.56■■□□□ 1.2
TSPAN18-207ENST00000520358 CEP162Q5TB80 1403 aa22.56■■□□□ 1.2
TSPAN18-207ENST00000520358 BICRAQ9NZM4 1560 aa22.47■■□□□ 1.19
TSPAN18-207ENST00000520358 TNIKQ9UKE5 1360 aa22.44■■□□□ 1.18
TSPAN18-207ENST00000520358 WRNQ14191 1432 aaPredicted RBP eCLIP22.44■■□□□ 1.186e-7■■■■■ 33.4
TSPAN18-207ENST00000520358 EEA1Q15075 1411 aa22.32■■□□□ 1.16
TSPAN18-207ENST00000520358 HNRNPUL2Q1KMD3 747 aaKnown RBP22.31■■□□□ 1.16
TSPAN18-207ENST00000520358 ATAD2BQ9ULI0 1458 aa22.3■■□□□ 1.16
TSPAN18-207ENST00000520358 GOLGA3Q08378 1498 aa22.29■■□□□ 1.16
TSPAN18-207ENST00000520358 BAZ1BQ9UIG0 1483 aaKnown RBP22.28■■□□□ 1.16
TSPAN18-207ENST00000520358 SYNJ1O43426 1573 aa22.22■■□□□ 1.15
TSPAN18-207ENST00000520358 APLP2Q06481 763 aa22.2■■□□□ 1.14
TSPAN18-207ENST00000520358 SCAF1Q9H7N4 1312 aaKnown RBP22.2■■□□□ 1.14
TSPAN18-207ENST00000520358 DIEXFQ68CQ4 756 aaKnown RBP22.19■■□□□ 1.14
TSPAN18-207ENST00000520358 PEG3Q9GZU2 1588 aa22.16■■□□□ 1.14
TSPAN18-207ENST00000520358 CLIP1P30622 1438 aa22.16■■□□□ 1.14
TSPAN18-207ENST00000520358 CEP164Q9UPV0 1460 aa22.14■■□□□ 1.14
TSPAN18-207ENST00000520358 RAPGEF2Q9Y4G8 1499 aa22.1■■□□□ 1.13
TSPAN18-207ENST00000520358 NEUROD1Q13562 356 aa22.01■■□□□ 1.11
TSPAN18-207ENST00000520358 VPS8Q8N3P4 1428 aa21.97■■□□□ 1.11
TSPAN18-207ENST00000520358 ZNF316A6NFI3 1004 aaPredicted RBP21.95■■□□□ 1.1
TSPAN18-207ENST00000520358 ACIN1Q9UKV3 1341 aaKnown RBP21.94■■□□□ 1.1
TSPAN18-207ENST00000520358 KIF21BO75037 1637 aa21.94■■□□□ 1.1
TSPAN18-207ENST00000520358 YTHDC1Q96MU7 727 aaKnown RBP21.9■■□□□ 1.1
TSPAN18-207ENST00000520358 KANK4Q5T7N3 995 aaPredicted RBP21.86■■□□□ 1.09
TSPAN18-207ENST00000520358 TOP2BQ02880 1626 aa21.84■■□□□ 1.09
TSPAN18-207ENST00000520358 CENPBP07199 599 aaPredicted RBP21.83■■□□□ 1.08
TSPAN18-207ENST00000520358 ITGAEP38570 1179 aa21.82■■□□□ 1.08
TSPAN18-207ENST00000520358 GTF3C3Q9Y5Q9 886 aa21.82■■□□□ 1.08
TSPAN18-207ENST00000520358 NCAPD3P42695 1498 aa21.79■■□□□ 1.08
TSPAN18-207ENST00000520358 MIER1Q8N108 512 aa21.75■■□□□ 1.07
TSPAN18-207ENST00000520358 CUX1P39880 1505 aa21.75■■□□□ 1.07
TSPAN18-207ENST00000520358 KIF27Q86VH2 1401 aa21.74■■□□□ 1.07
TSPAN18-207ENST00000520358 PRXQ9BXM0 1461 aa21.73■■□□□ 1.07
TSPAN18-207ENST00000520358 ARAP1Q96P48 1450 aa21.67■■□□□ 1.06
TSPAN18-207ENST00000520358 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
TSPAN18-207ENST00000520358 ATP1B4Q9UN42 357 aaPredicted RBP21.65■■□□□ 1.06
TSPAN18-207ENST00000520358 CFTRP13569 1480 aa21.64■■□□□ 1.06
TSPAN18-207ENST00000520358 HMGXB3Q12766 1538 aa21.64■■□□□ 1.05
TSPAN18-207ENST00000520358 P3H3Q8IVL6 736 aa21.64■■□□□ 1.05
TSPAN18-207ENST00000520358 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
TSPAN18-207ENST00000520358 CUX2O14529 1486 aa21.59■■□□□ 1.05
TSPAN18-207ENST00000520358 IGF1RP08069 1367 aa21.55■■□□□ 1.04
TSPAN18-207ENST00000520358 DHX57Q6P158 1386 aaKnown RBP21.55■■□□□ 1.04
TSPAN18-207ENST00000520358 ARHGAP35Q9NRY4 1499 aa21.52■■□□□ 1.04
TSPAN18-207ENST00000520358 CADPSQ9ULU8 1353 aa21.52■■□□□ 1.03
TSPAN18-207ENST00000520358 CARMIL1Q5VZK9 1371 aa21.49■■□□□ 1.03
TSPAN18-207ENST00000520358 PELP1Q8IZL8 1130 aaKnown RBP21.48■■□□□ 1.03
TSPAN18-207ENST00000520358 CCNB3Q8WWL7 1395 aa21.47■■□□□ 1.03
TSPAN18-207ENST00000520358 FAM50AQ14320 339 aaKnown RBP21.45■■□□□ 1.03
TSPAN18-207ENST00000520358 FGD5Q6ZNL6 1462 aa21.42■■□□□ 1.02
TSPAN18-207ENST00000520358 RRBP1Q9P2E9 1410 aaKnown RBP21.39■■□□□ 1.01
TSPAN18-207ENST00000520358 CLSPNQ9HAW4 1339 aa21.38■■□□□ 1.01
TSPAN18-207ENST00000520358 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
TSPAN18-207ENST00000520358 RAB3GAP2Q9H2M9 1393 aa21.32■■□□□ 1
TSPAN18-207ENST00000520358 FANCD2Q9BXW9 1451 aa21.3■■□□□ 1
TSPAN18-207ENST00000520358 SIN3AQ96ST3 1273 aa21.29■■□□□ 1
TSPAN18-207ENST00000520358 CC2D2AQ9P2K1 1620 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms