RNA–Protein interactions for RNA: ENST00000520306.1

AF117829.1-203, humanhuman

TSL 5 BASIC

Gene AF117829.1, Length 421 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF117829.1-203ENST00000520306 AEBP2Q6ZN18 517 aaPredicted RBP23.51■■□□□ 1.35
AF117829.1-203ENST00000520306 CHIC1Q5VXU3 224 aa22.27■■□□□ 1.16
AF117829.1-203ENST00000520306 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
AF117829.1-203ENST00000520306 PHF23Q9BUL5 403 aaPredicted RBP19.73■□□□□ 0.75
AF117829.1-203ENST00000520306 FOXD1Q16676 465 aa18.67■□□□□ 0.58
AF117829.1-203ENST00000520306 PLPPR3Q6T4P5 718 aa17.73■□□□□ 0.43
AF117829.1-203ENST00000520306 PPP6R1Q9UPN7 881 aa17.44■□□□□ 0.38
AF117829.1-203ENST00000520306 MSH5O43196 834 aa17.43■□□□□ 0.38
AF117829.1-203ENST00000520306 PIAS4Q8N2W9 510 aaPredicted RBP17.38■□□□□ 0.37
AF117829.1-203ENST00000520306 ADRA2BP18089 450 aa17.35■□□□□ 0.37
AF117829.1-203ENST00000520306 POTEDQ86YR6 584 aa17.09■□□□□ 0.33
AF117829.1-203ENST00000520306 MAPK8IP2Q13387 824 aaPredicted RBP15.95■□□□□ 0.14
AF117829.1-203ENST00000520306 DMRT2Q9Y5R5 561 aa15.88■□□□□ 0.13
AF117829.1-203ENST00000520306 SCAF1Q9H7N4 1312 aaKnown RBP15.8■□□□□ 0.12
AF117829.1-203ENST00000520306 PPP4R3CPQ6ZMV5 832 aa15.55■□□□□ 0.08
AF117829.1-203ENST00000520306 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
AF117829.1-203ENST00000520306 CNKSR2Q8WXI2 1034 aa15.26■□□□□ 0.03
AF117829.1-203ENST00000520306 RNF216Q9NWF9 866 aaPredicted RBP15.15■□□□□ 0.02
AF117829.1-203ENST00000520306 DCAF8L1A6NGE4 600 aa15.09■□□□□ 0.01
AF117829.1-203ENST00000520306 CACNB1Q02641 598 aaPredicted RBP14.93□□□□□ -0.02
AF117829.1-203ENST00000520306 RNF39Q9H2S5 420 aa14.92□□□□□ -0.02
AF117829.1-203ENST00000520306 NCBP3Q53F19 620 aaKnown RBP14.89□□□□□ -0.03
AF117829.1-203ENST00000520306 DNAJC5BQ9UF47 199 aa14.8□□□□□ -0.04
AF117829.1-203ENST00000520306 NPM3O75607 178 aaKnown RBP14.75□□□□□ -0.05
AF117829.1-203ENST00000520306 C1QBPQ07021 282 aaKnown RBP14.66□□□□□ -0.06
AF117829.1-203ENST00000520306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.47□□□□□ -0.09
AF117829.1-203ENST00000520306 KCNA4P22459 653 aa14.44□□□□□ -0.1
AF117829.1-203ENST00000520306 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
AF117829.1-203ENST00000520306 SLC4A2P04920 1241 aa14.13□□□□□ -0.15
AF117829.1-203ENST00000520306 SPINK5Q9NQ38 1064 aaPredicted RBP14.04□□□□□ -0.16
AF117829.1-203ENST00000520306 DSG3P32926 999 aa13.95□□□□□ -0.18
AF117829.1-203ENST00000520306 CAPN15O75808 1086 aa13.94□□□□□ -0.18
AF117829.1-203ENST00000520306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.76□□□□□ -0.21
AF117829.1-203ENST00000520306 APLP2Q06481 763 aa13.76□□□□□ -0.21
AF117829.1-203ENST00000520306 HNRNPUL2Q1KMD3 747 aaKnown RBP13.76□□□□□ -0.21
AF117829.1-203ENST00000520306 ZNF219Q9P2Y4 722 aaPredicted RBP13.72□□□□□ -0.21
AF117829.1-203ENST00000520306 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
AF117829.1-203ENST00000520306 SAMD1Q6SPF0 538 aaPredicted RBP13.7□□□□□ -0.22
AF117829.1-203ENST00000520306 ABCB7O75027 752 aa13.65□□□□□ -0.22
AF117829.1-203ENST00000520306 MYCNP04198 464 aaPredicted RBP13.62□□□□□ -0.23
AF117829.1-203ENST00000520306 SLC4A1APQ9BWU0 796 aaKnown RBP13.59□□□□□ -0.23
AF117829.1-203ENST00000520306 FOXD4L1Q9NU39 408 aa13.47□□□□□ -0.25
AF117829.1-203ENST00000520306 POTEHQ6S545 545 aa13.37□□□□□ -0.27
AF117829.1-203ENST00000520306 POLA2Q14181 598 aa13.36□□□□□ -0.27
AF117829.1-203ENST00000520306 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
AF117829.1-203ENST00000520306 ZBTB22O15209 634 aa13.33□□□□□ -0.28
AF117829.1-203ENST00000520306 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
AF117829.1-203ENST00000520306 ZBTB12Q9Y330 459 aaPredicted RBP13.09□□□□□ -0.31
AF117829.1-203ENST00000520306 ATXN8OSP0DMR3 200 aa13.07□□□□□ -0.32
AF117829.1-203ENST00000520306 CHRDL2Q6WN34 429 aa13□□□□□ -0.33
AF117829.1-203ENST00000520306 AKT1S1Q96B36 256 aa12.98□□□□□ -0.33
AF117829.1-203ENST00000520306 OSCARQ8IYS5 282 aa12.97□□□□□ -0.33
AF117829.1-203ENST00000520306 EHMT2Q96KQ7 1210 aa12.87□□□□□ -0.35
AF117829.1-203ENST00000520306 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
AF117829.1-203ENST00000520306 CSRNP3Q8WYN3 585 aa12.83□□□□□ -0.36
AF117829.1-203ENST00000520306 MKRN4PQ13434 485 aaPredicted RBP12.76□□□□□ -0.37
AF117829.1-203ENST00000520306 PITPNM1O00562 1244 aa12.74□□□□□ -0.37
AF117829.1-203ENST00000520306 FBLN2P98095 1184 aa12.74□□□□□ -0.37
AF117829.1-203ENST00000520306 SPDYE2BA6NHP3 402 aa12.72□□□□□ -0.37
AF117829.1-203ENST00000520306 SPDYE6P0CI01 402 aa12.72□□□□□ -0.37
AF117829.1-203ENST00000520306 SPDYE2Q495Y8 402 aa12.72□□□□□ -0.37
AF117829.1-203ENST00000520306 PIP4P2Q8N4L2 257 aa12.71□□□□□ -0.37
AF117829.1-203ENST00000520306 FXR2P51116 673 aaKnown RBP eCLIP12.65□□□□□ -0.38
AF117829.1-203ENST00000520306 SSUH2Q9Y2M2 353 aa12.6□□□□□ -0.39
AF117829.1-203ENST00000520306 SP7Q8TDD2 431 aaPredicted RBP12.52□□□□□ -0.41
AF117829.1-203ENST00000520306 ZNF692Q9BU19 519 aaPredicted RBP12.51□□□□□ -0.41
AF117829.1-203ENST00000520306 SPDYE1Q8NFV5 336 aaPredicted RBP12.48□□□□□ -0.41
AF117829.1-203ENST00000520306 HAX1O00165 279 aa12.4□□□□□ -0.42
AF117829.1-203ENST00000520306 CLEC11AQ9Y240 323 aa12.4□□□□□ -0.42
AF117829.1-203ENST00000520306 PRKAR2AP13861 404 aaKnown RBP12.37□□□□□ -0.43
AF117829.1-203ENST00000520306 PABPN1Q86U42 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
AF117829.1-203ENST00000520306 EVX2Q03828 476 aa12.34□□□□□ -0.43
AF117829.1-203ENST00000520306 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
AF117829.1-203ENST00000520306 CHADLQ6NUI6 762 aa12.23□□□□□ -0.45
AF117829.1-203ENST00000520306 PRR29P0C7W0 189 aa12.21□□□□□ -0.45
AF117829.1-203ENST00000520306 SPDYE4A6NLX3 237 aa12.06□□□□□ -0.48
AF117829.1-203ENST00000520306 FARP1Q9Y4F1 1045 aaPredicted RBP12.05□□□□□ -0.48
AF117829.1-203ENST00000520306 GABBR2O75899 941 aa12.03□□□□□ -0.48
AF117829.1-203ENST00000520306 CREBZFQ9NS37 354 aa11.99□□□□□ -0.49
AF117829.1-203ENST00000520306 STAG3Q9UJ98 1225 aa11.98□□□□□ -0.49
AF117829.1-203ENST00000520306 CD44P16070 742 aaKnown RBP11.97□□□□□ -0.49
AF117829.1-203ENST00000520306 PROM2Q8N271 834 aa11.88□□□□□ -0.51
AF117829.1-203ENST00000520306 POTEIP0CG38 1075 aa11.84□□□□□ -0.51
AF117829.1-203ENST00000520306 ZNF579Q8NAF0 562 aaKnown RBP11.84□□□□□ -0.51
AF117829.1-203ENST00000520306 MNX1P50219 401 aaPredicted RBP11.82□□□□□ -0.52
AF117829.1-203ENST00000520306 CLCN6P51797 869 aa11.81□□□□□ -0.52
AF117829.1-203ENST00000520306 ZRANB1Q9UGI0 708 aa11.78□□□□□ -0.52
AF117829.1-203ENST00000520306 LHX8Q68G74 356 aa11.72□□□□□ -0.53
AF117829.1-203ENST00000520306 NPM1P06748 294 aaKnown RBP eCLIP11.68□□□□□ -0.54
AF117829.1-203ENST00000520306 GALR2O43603 387 aaPredicted RBP11.67□□□□□ -0.54
AF117829.1-203ENST00000520306 PHF12Q96QT6 1004 aa11.66□□□□□ -0.54
AF117829.1-203ENST00000520306 PAK3O75914 559 aaPredicted RBP11.63□□□□□ -0.55
AF117829.1-203ENST00000520306 DCBLD2Q96PD2 775 aa11.63□□□□□ -0.55
AF117829.1-203ENST00000520306 FKBP8Q14318 412 aa11.6□□□□□ -0.55
AF117829.1-203ENST00000520306 MS4A3Q96HJ5 214 aa11.51□□□□□ -0.57
AF117829.1-203ENST00000520306 CCDC61Q9Y6R9 512 aa11.51□□□□□ -0.57
AF117829.1-203ENST00000520306 PELP1Q8IZL8 1130 aaKnown RBP11.47□□□□□ -0.57
AF117829.1-203ENST00000520306 TSPYL2Q9H2G4 693 aaPredicted RBP11.47□□□□□ -0.57
AF117829.1-203ENST00000520306 ASTLQ6HA08 431 aaPredicted RBP11.45□□□□□ -0.58
AF117829.1-203ENST00000520306 MIER1Q8N108 512 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms