RNA–Protein interactions for RNA: ENST00000520096.5

LINC00535-203, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 790 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-203ENST00000520096 AEBP2Q6ZN18 517 aaPredicted RBP29.79■■■□□ 2.36
LINC00535-203ENST00000520096 CHIC1Q5VXU3 224 aa28.23■■■□□ 2.11
LINC00535-203ENST00000520096 SENP3Q9H4L4 574 aaPredicted RBP25.34■■□□□ 1.65
LINC00535-203ENST00000520096 PHF23Q9BUL5 403 aaPredicted RBP25.02■■□□□ 1.6
LINC00535-203ENST00000520096 FOXD1Q16676 465 aa23.66■■□□□ 1.38
LINC00535-203ENST00000520096 PLPPR3Q6T4P5 718 aa22.51■■□□□ 1.19
LINC00535-203ENST00000520096 PPP6R1Q9UPN7 881 aa22.14■■□□□ 1.13
LINC00535-203ENST00000520096 MSH5O43196 834 aa22.1■■□□□ 1.13
LINC00535-203ENST00000520096 PIAS4Q8N2W9 510 aaPredicted RBP22.08■■□□□ 1.13
LINC00535-203ENST00000520096 ADRA2BP18089 450 aa22.04■■□□□ 1.12
LINC00535-203ENST00000520096 POTEDQ86YR6 584 aa21.64■■□□□ 1.05
LINC00535-203ENST00000520096 MAPK8IP2Q13387 824 aaPredicted RBP20.25■□□□□ 0.83
LINC00535-203ENST00000520096 DMRT2Q9Y5R5 561 aa20.12■□□□□ 0.81
LINC00535-203ENST00000520096 SCAF1Q9H7N4 1312 aaKnown RBP20.08■□□□□ 0.81
LINC00535-203ENST00000520096 PPP4R3CPQ6ZMV5 832 aa19.75■□□□□ 0.75
LINC00535-203ENST00000520096 HOXD11P31277 338 aaPredicted RBP19.38■□□□□ 0.69
LINC00535-203ENST00000520096 CNKSR2Q8WXI2 1034 aa19.37■□□□□ 0.69
LINC00535-203ENST00000520096 DCAF8L1A6NGE4 600 aa19.24■□□□□ 0.67
LINC00535-203ENST00000520096 RNF216Q9NWF9 866 aaPredicted RBP19.21■□□□□ 0.67
LINC00535-203ENST00000520096 CACNB1Q02641 598 aaPredicted RBP18.97■□□□□ 0.63
LINC00535-203ENST00000520096 NCBP3Q53F19 620 aaKnown RBP18.93■□□□□ 0.62
LINC00535-203ENST00000520096 RNF39Q9H2S5 420 aa18.89■□□□□ 0.61
LINC00535-203ENST00000520096 NPM3O75607 178 aaKnown RBP18.73■□□□□ 0.59
LINC00535-203ENST00000520096 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
LINC00535-203ENST00000520096 C1QBPQ07021 282 aaKnown RBP18.58■□□□□ 0.56
LINC00535-203ENST00000520096 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.41■□□□□ 0.54
LINC00535-203ENST00000520096 KCNA4P22459 653 aa18.37■□□□□ 0.53
LINC00535-203ENST00000520096 U3KPZ7 1027 aaPredicted RBP18.08■□□□□ 0.48
LINC00535-203ENST00000520096 SLC4A2P04920 1241 aa17.91■□□□□ 0.46
LINC00535-203ENST00000520096 SPINK5Q9NQ38 1064 aaPredicted RBP17.83■□□□□ 0.44
LINC00535-203ENST00000520096 CAPN15O75808 1086 aa17.75■□□□□ 0.43
LINC00535-203ENST00000520096 DSG3P32926 999 aa17.69■□□□□ 0.42
LINC00535-203ENST00000520096 EHMT2Q96KQ7 1210 aa17.63■□□□□ 0.41
LINC00535-203ENST00000520096 SLC4A1APQ9BWU0 796 aaKnown RBP17.54■□□□□ 0.4
LINC00535-203ENST00000520096 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.48■□□□□ 0.39
LINC00535-203ENST00000520096 APLP2Q06481 763 aa17.48■□□□□ 0.39
LINC00535-203ENST00000520096 HNRNPUL2Q1KMD3 747 aaKnown RBP17.48■□□□□ 0.39
LINC00535-203ENST00000520096 TRHP20396 242 aaPredicted RBP17.46■□□□□ 0.39
LINC00535-203ENST00000520096 ZNF219Q9P2Y4 722 aaPredicted RBP17.42■□□□□ 0.38
LINC00535-203ENST00000520096 SAMD1Q6SPF0 538 aaPredicted RBP17.4■□□□□ 0.38
LINC00535-203ENST00000520096 ABCB7O75027 752 aa17.37■□□□□ 0.37
LINC00535-203ENST00000520096 MYCNP04198 464 aaPredicted RBP17.3■□□□□ 0.36
LINC00535-203ENST00000520096 CSRNP3Q8WYN3 585 aa17.2■□□□□ 0.34
LINC00535-203ENST00000520096 FOXD4L1Q9NU39 408 aa17.12■□□□□ 0.33
LINC00535-203ENST00000520096 POLA2Q14181 598 aa17■□□□□ 0.31
LINC00535-203ENST00000520096 ATF5Q9Y2D1 282 aaPredicted RBP16.96■□□□□ 0.31
LINC00535-203ENST00000520096 POTEHQ6S545 545 aa16.95■□□□□ 0.3
LINC00535-203ENST00000520096 ZBTB22O15209 634 aa16.93■□□□□ 0.3
LINC00535-203ENST00000520096 RBM42Q9BTD8 480 aaKnown RBP16.82■□□□□ 0.28
LINC00535-203ENST00000520096 ZBTB12Q9Y330 459 aaPredicted RBP16.62■□□□□ 0.25
LINC00535-203ENST00000520096 ATXN8OSP0DMR3 200 aa16.58■□□□□ 0.24
LINC00535-203ENST00000520096 CHRDL2Q6WN34 429 aa16.5■□□□□ 0.23
LINC00535-203ENST00000520096 OSCARQ8IYS5 282 aa16.48■□□□□ 0.23
LINC00535-203ENST00000520096 AKT1S1Q96B36 256 aa16.46■□□□□ 0.23
LINC00535-203ENST00000520096 REM2Q8IYK8 340 aaPredicted RBP16.32■□□□□ 0.2
LINC00535-203ENST00000520096 FBLN2P98095 1184 aa16.2■□□□□ 0.18
LINC00535-203ENST00000520096 MKRN4PQ13434 485 aaPredicted RBP16.17■□□□□ 0.18
LINC00535-203ENST00000520096 PITPNM1O00562 1244 aa16.16■□□□□ 0.18
LINC00535-203ENST00000520096 SPDYE2BA6NHP3 402 aa16.13■□□□□ 0.17
LINC00535-203ENST00000520096 SPDYE6P0CI01 402 aa16.13■□□□□ 0.17
LINC00535-203ENST00000520096 SPDYE2Q495Y8 402 aa16.13■□□□□ 0.17
LINC00535-203ENST00000520096 PIP4P2Q8N4L2 257 aa16.12■□□□□ 0.17
LINC00535-203ENST00000520096 FXR2P51116 673 aaKnown RBP eCLIP16.02■□□□□ 0.16
LINC00535-203ENST00000520096 SSUH2Q9Y2M2 353 aa15.95■□□□□ 0.14
LINC00535-203ENST00000520096 ZNF692Q9BU19 519 aaPredicted RBP15.92■□□□□ 0.14
LINC00535-203ENST00000520096 SP7Q8TDD2 431 aaPredicted RBP15.87■□□□□ 0.13
LINC00535-203ENST00000520096 SPDYE1Q8NFV5 336 aaPredicted RBP15.84■□□□□ 0.13
LINC00535-203ENST00000520096 CLEC11AQ9Y240 323 aa15.82■□□□□ 0.12
LINC00535-203ENST00000520096 HAX1O00165 279 aa15.78■□□□□ 0.12
LINC00535-203ENST00000520096 PRKAR2AP13861 404 aaKnown RBP15.72■□□□□ 0.11
LINC00535-203ENST00000520096 PABPN1Q86U42 306 aaKnown RBP eCLIP15.71■□□□□ 0.11
LINC00535-203ENST00000520096 EVX2Q03828 476 aa15.67■□□□□ 0.1
LINC00535-203ENST00000520096 CHADLQ6NUI6 762 aa15.56■□□□□ 0.08
LINC00535-203ENST00000520096 PRR29P0C7W0 189 aa15.55■□□□□ 0.08
LINC00535-203ENST00000520096 C19orf67A6NJJ6 358 aa15.51■□□□□ 0.07
LINC00535-203ENST00000520096 FKBP8Q14318 412 aa15.51■□□□□ 0.07
LINC00535-203ENST00000520096 SPDYE4A6NLX3 237 aa15.35■□□□□ 0.05
LINC00535-203ENST00000520096 FARP1Q9Y4F1 1045 aaPredicted RBP15.31■□□□□ 0.04
LINC00535-203ENST00000520096 GABBR2O75899 941 aa15.27■□□□□ 0.04
LINC00535-203ENST00000520096 STAG3Q9UJ98 1225 aa15.23■□□□□ 0.03
LINC00535-203ENST00000520096 CD44P16070 742 aaKnown RBP15.22■□□□□ 0.03
LINC00535-203ENST00000520096 CREBZFQ9NS37 354 aa15.21■□□□□ 0.03
LINC00535-203ENST00000520096 PROM2Q8N271 834 aa15.02■□□□□ -0
LINC00535-203ENST00000520096 ZNF579Q8NAF0 562 aaKnown RBP15□□□□□ -0.01
LINC00535-203ENST00000520096 ZRANB1Q9UGI0 708 aa15□□□□□ -0.01
LINC00535-203ENST00000520096 POTEIP0CG38 1075 aa14.99□□□□□ -0.01
LINC00535-203ENST00000520096 RTN4Q9NQC3 1192 aaKnown RBP14.98□□□□□ -0.01
LINC00535-203ENST00000520096 MNX1P50219 401 aaPredicted RBP14.97□□□□□ -0.01
LINC00535-203ENST00000520096 CLCN6P51797 869 aa14.97□□□□□ -0.01
LINC00535-203ENST00000520096 AMER1Q5JTC6 1135 aaPredicted RBP14.93□□□□□ -0.02
LINC00535-203ENST00000520096 LHX8Q68G74 356 aa14.88□□□□□ -0.03
LINC00535-203ENST00000520096 NPM1P06748 294 aaKnown RBP eCLIP14.86□□□□□ -0.03
LINC00535-203ENST00000520096 GALR2O43603 387 aaPredicted RBP14.83□□□□□ -0.04
LINC00535-203ENST00000520096 PAK3O75914 559 aaPredicted RBP14.82□□□□□ -0.04
LINC00535-203ENST00000520096 DCBLD2Q96PD2 775 aa14.81□□□□□ -0.04
LINC00535-203ENST00000520096 PHF12Q96QT6 1004 aa14.81□□□□□ -0.04
LINC00535-203ENST00000520096 FBXO3Q9UK99 471 aa14.75□□□□□ -0.05
LINC00535-203ENST00000520096 TSPYL2Q9H2G4 693 aaPredicted RBP14.63□□□□□ -0.07
LINC00535-203ENST00000520096 MIER1Q8N108 512 aa14.62□□□□□ -0.07
LINC00535-203ENST00000520096 MS4A3Q96HJ5 214 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms