RNA–Protein interactions for RNA: ENST00000519993.5

PTK2-218, Transcript of protein tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene PTK2, Length 4,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-218ENST00000519993 NISCHQ9Y2I1 1504 aa31.04■■■□□ 2.56
PTK2-218ENST00000519993 DCAF8L2P0C7V8 631 aa30.45■■■□□ 2.47
PTK2-218ENST00000519993 SUPT5HO00267 1087 aaKnown RBP29.89■■■□□ 2.38
PTK2-218ENST00000519993 SHROOM4Q9ULL8 1493 aa29.58■■■□□ 2.33
PTK2-218ENST00000519993 EHMT2Q96KQ7 1210 aa28.55■■■□□ 2.16
PTK2-218ENST00000519993 PCGF6Q9BYE7 350 aa28.38■■■□□ 2.13
PTK2-218ENST00000519993 FAM9AQ8IZU1 332 aaPredicted RBP28.05■■■□□ 2.08
PTK2-218ENST00000519993 TTBK1Q5TCY1 1321 aaPredicted RBP27.63■■■□□ 2.01
PTK2-218ENST00000519993 TRIM41Q8WV44 630 aa27.54■■■□□ 2
PTK2-218ENST00000519993 HRCP23327 699 aa27.41■■□□□ 1.98
PTK2-218ENST00000519993 CHIC1Q5VXU3 224 aa27.4■■□□□ 1.98
PTK2-218ENST00000519993 LOC105371045A0A1W2PR82 267 aa27.3■■□□□ 1.96
PTK2-218ENST00000519993 ZEB1P37275 1124 aaPredicted RBP27.29■■□□□ 1.96
PTK2-218ENST00000519993 APLP2Q06481 763 aa27.25■■□□□ 1.95
PTK2-218ENST00000519993 CCER1Q8TC90 406 aaPredicted RBP27.22■■□□□ 1.95
PTK2-218ENST00000519993 PPARGC1BQ86YN6 1023 aaKnown RBP27.17■■□□□ 1.94
PTK2-218ENST00000519993 TRIM26Q12899 539 aaPredicted RBP27.11■■□□□ 1.93
PTK2-218ENST00000519993 RANGAP1P46060 587 aaPredicted RBP27.03■■□□□ 1.92
PTK2-218ENST00000519993 CENPBP07199 599 aaPredicted RBP26.96■■□□□ 1.91
PTK2-218ENST00000519993 PELP1Q8IZL8 1130 aaKnown RBP26.9■■□□□ 1.9
PTK2-218ENST00000519993 UBTFP17480 764 aaKnown RBP26.88■■□□□ 1.89
PTK2-218ENST00000519993 YTHDC1Q96MU7 727 aaKnown RBP26.69■■□□□ 1.86
PTK2-218ENST00000519993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.42■■□□□ 1.82
PTK2-218ENST00000519993 ATP1B4Q9UN42 357 aaPredicted RBP26.37■■□□□ 1.81
PTK2-218ENST00000519993 HNRNPUL2Q1KMD3 747 aaKnown RBP26.26■■□□□ 1.79
PTK2-218ENST00000519993 DIEXFQ68CQ4 756 aaKnown RBP26.11■■□□□ 1.77
PTK2-218ENST00000519993 ITGAEP38570 1179 aa26.07■■□□□ 1.76
PTK2-218ENST00000519993 NEFLP07196 543 aa25.92■■□□□ 1.74
PTK2-218ENST00000519993 ZCCHC6Q5VYS8 1495 aaKnown RBP25.88■■□□□ 1.73
PTK2-218ENST00000519993 ERICH6Q7L0X2 663 aa25.87■■□□□ 1.73
PTK2-218ENST00000519993 MYT1Q01538 1121 aa25.82■■□□□ 1.72
PTK2-218ENST00000519993 GTF3C3Q9Y5Q9 886 aa25.8■■□□□ 1.72
PTK2-218ENST00000519993 ABCC9O60706 1549 aa25.8■■□□□ 1.72
PTK2-218ENST00000519993 MYO15BQ96JP2 1530 aa25.8■■□□□ 1.72
PTK2-218ENST00000519993 DCAF1Q9Y4B6 1507 aa25.7■■□□□ 1.7
PTK2-218ENST00000519993 PABPN1Q86U42 306 aaKnown RBP eCLIP25.65■■□□□ 1.7
PTK2-218ENST00000519993 ACIN1Q9UKV3 1341 aaKnown RBP25.56■■□□□ 1.68
PTK2-218ENST00000519993 ZNF316A6NFI3 1004 aaPredicted RBP25.52■■□□□ 1.68
PTK2-218ENST00000519993 CSRNP3Q8WYN3 585 aa25.46■■□□□ 1.67
PTK2-218ENST00000519993 CNGB1Q14028 1251 aaPredicted RBP25.39■■□□□ 1.65
PTK2-218ENST00000519993 POLR3GLQ9BT43 218 aa25.35■■□□□ 1.65
PTK2-218ENST00000519993 FAM50AQ14320 339 aaKnown RBP25.35■■□□□ 1.65
PTK2-218ENST00000519993 SCRIBQ14160 1630 aa25.33■■□□□ 1.65
PTK2-218ENST00000519993 NEUROD1Q13562 356 aa25.32■■□□□ 1.64
PTK2-218ENST00000519993 BCANQ96GW7 911 aa25.28■■□□□ 1.64
PTK2-218ENST00000519993 SCAF1Q9H7N4 1312 aaKnown RBP25.28■■□□□ 1.64
PTK2-218ENST00000519993 CCDC180Q9P1Z9 1646 aa25.14■■□□□ 1.61
PTK2-218ENST00000519993 RSF1Q96T23 1441 aaPredicted RBP25.09■■□□□ 1.61
PTK2-218ENST00000519993 P3H3Q8IVL6 736 aa24.99■■□□□ 1.59
PTK2-218ENST00000519993 TRIM52Q96A61 297 aa24.98■■□□□ 1.59
PTK2-218ENST00000519993 ANP32CO43423 234 aa24.96■■□□□ 1.59
PTK2-218ENST00000519993 MIER1Q8N108 512 aa24.92■■□□□ 1.58
PTK2-218ENST00000519993 DDX10Q13206 875 aaKnown RBP24.75■■□□□ 1.55
PTK2-218ENST00000519993 CEP162Q5TB80 1403 aa24.73■■□□□ 1.55
PTK2-218ENST00000519993 ZNF326Q5BKZ1 582 aaKnown RBP24.73■■□□□ 1.55
PTK2-218ENST00000519993 DAXXQ9UER7 740 aaPredicted RBP24.72■■□□□ 1.55
PTK2-218ENST00000519993 FKBP8Q14318 412 aa24.7■■□□□ 1.54
PTK2-218ENST00000519993 ARID3CA6NKF2 412 aa24.68■■□□□ 1.54
PTK2-218ENST00000519993 MYT1LQ9UL68 1186 aa24.67■■□□□ 1.54
PTK2-218ENST00000519993 CDK11AQ9UQ88 783 aaPredicted RBP24.66■■□□□ 1.54
PTK2-218ENST00000519993 CLIP1P30622 1438 aa24.66■■□□□ 1.54
PTK2-218ENST00000519993 RTL5Q5HYW3 569 aaPredicted RBP24.57■■□□□ 1.52
PTK2-218ENST00000519993 CECR2Q9BXF3 1484 aa24.57■■□□□ 1.52
PTK2-218ENST00000519993 HIRIP3Q9BW71 556 aaPredicted RBP24.56■■□□□ 1.52
PTK2-218ENST00000519993 CLSPNQ9HAW4 1339 aa24.51■■□□□ 1.51
PTK2-218ENST00000519993 TONSLQ96HA7 1378 aa24.49■■□□□ 1.51
PTK2-218ENST00000519993 HNRNPUQ00839 825 aaKnown RBP eCLIP24.49■■□□□ 1.51
PTK2-218ENST00000519993 TNIKQ9UKE5 1360 aa24.49■■□□□ 1.51
PTK2-218ENST00000519993 RB1CC1Q8TDY2 1594 aa24.48■■□□□ 1.51
PTK2-218ENST00000519993 GOLGA3Q08378 1498 aa24.47■■□□□ 1.51
PTK2-218ENST00000519993 EEA1Q15075 1411 aa24.44■■□□□ 1.5
PTK2-218ENST00000519993 WRNQ14191 1432 aaPredicted RBP eCLIP24.4■■□□□ 1.5
PTK2-218ENST00000519993 SLC4A1APQ9BWU0 796 aaKnown RBP24.4■■□□□ 1.5
PTK2-218ENST00000519993 FBLN2P98095 1184 aa24.38■■□□□ 1.49
PTK2-218ENST00000519993 SOGA1O94964 1423 aa24.36■■□□□ 1.49
PTK2-218ENST00000519993 FAM9BQ8IZU0 186 aa24.35■■□□□ 1.49
PTK2-218ENST00000519993 CHIC2Q9UKJ5 165 aa24.35■■□□□ 1.49
PTK2-218ENST00000519993 ZNF777Q9ULD5 760 aaPredicted RBP24.31■■□□□ 1.48
PTK2-218ENST00000519993 IRX6P78412 446 aaPredicted RBP24.28■■□□□ 1.48
PTK2-218ENST00000519993 MROH2BQ7Z745 1585 aa24.23■■□□□ 1.47
PTK2-218ENST00000519993 CEP164Q9UPV0 1460 aa24.22■■□□□ 1.47
PTK2-218ENST00000519993 NACADO15069 1562 aa24.22■■□□□ 1.47
PTK2-218ENST00000519993 NPM2Q86SE8 214 aaKnown RBP24.16■■□□□ 1.46
PTK2-218ENST00000519993 SIN3AQ96ST3 1273 aa24.16■■□□□ 1.46
PTK2-218ENST00000519993 CCDC88BA6NC98 1476 aa24.15■■□□□ 1.46
PTK2-218ENST00000519993 BAZ1AQ9NRL2 1556 aaPredicted RBP24.15■■□□□ 1.46
PTK2-218ENST00000519993 MTUS2Q5JR59 1369 aa24.15■■□□□ 1.46
PTK2-218ENST00000519993 ANP32AP39687 249 aaKnown RBP24.14■■□□□ 1.46
PTK2-218ENST00000519993 SALL2Q9Y467 1007 aaPredicted RBP24.14■■□□□ 1.45
PTK2-218ENST00000519993 ABCC8Q09428 1581 aa24.13■■□□□ 1.45
PTK2-218ENST00000519993 MRS2Q9HD23 443 aa24.13■■□□□ 1.45
PTK2-218ENST00000519993 RRP7BPQ9NSQ0 103 aa24.1■■□□□ 1.45
PTK2-218ENST00000519993 SUPT16HQ9Y5B9 1047 aaKnown RBP24.09■■□□□ 1.45
PTK2-218ENST00000519993 BAZ1BQ9UIG0 1483 aaKnown RBP24.01■■□□□ 1.43
PTK2-218ENST00000519993 CCDC136Q96JN2 1154 aa24.01■■□□□ 1.43
PTK2-218ENST00000519993 EIF4G2P78344 907 aaKnown RBP eCLIP24■■□□□ 1.431e-6■■■■□ 21.9
PTK2-218ENST00000519993 KANK4Q5T7N3 995 aaPredicted RBP24■■□□□ 1.43
PTK2-218ENST00000519993 TMC1Q8TDI8 760 aa23.99■■□□□ 1.43
PTK2-218ENST00000519993 SENP3-EIF4A1A0A087X0R7 540 aa23.99■■□□□ 1.43
PTK2-218ENST00000519993 KIF27Q86VH2 1401 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms