RNA–Protein interactions for RNA: ENST00000519993.5

PTK2-218, Transcript of protein tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene PTK2, Length 4,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-218ENST00000519993 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.81■□□□□ 0.284e-19■■■■■ 62.4
PTK2-218ENST00000519993 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.22■□□□□ 0.675e-18■■■□□ 15.3
PTK2-218ENST00000519993 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.84■□□□□ 0.294e-14■■■■■ 50.3
PTK2-218ENST00000519993 DDX3XO00571 662 aaKnown RBP eCLIP18.67■□□□□ 0.586e-14■■■■□ 21.8
PTK2-218ENST00000519993 NKRFO15226 690 aaKnown RBP eCLIP18.33■□□□□ 0.522e-10■■■□□ 14.6
PTK2-218ENST00000519993 RBFOX2O43251 390 aaKnown RBP eCLIP14.71□□□□□ -0.055e-10■■■■■ 36.6
PTK2-218ENST00000519993 YBX3P16989 372 aaKnown RBP eCLIP18.05■□□□□ 0.484e-9■■□□□ 11.5
PTK2-218ENST00000519993 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.32■□□□□ 0.524e-9■■■■■ 36.3
PTK2-218ENST00000519993 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.57■□□□□ 0.247e-9■■■■□ 19.8
PTK2-218ENST00000519993 QKIQ96PU8 341 aaKnown RBP eCLIP17.83■□□□□ 0.442e-8■■■■■ 35.7
PTK2-218ENST00000519993 ILF3Q12906 894 aaKnown RBP eCLIP16.89■□□□□ 0.32e-8■■■■□ 22.7
PTK2-218ENST00000519993 SLBPQ14493 270 aaKnown RBP eCLIP17.19■□□□□ 0.343e-8■■■■■ 184.8
PTK2-218ENST00000519993 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.88■□□□□ 0.613e-8■■■■■ 212.2
PTK2-218ENST00000519993 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.27■□□□□ 0.524e-8■■■■□ 23.4
PTK2-218ENST00000519993 PCBP1Q15365 356 aaKnown RBP eCLIP17.67■□□□□ 0.425e-8■■■■■ 41.6
PTK2-218ENST00000519993 NONOQ15233 471 aaKnown RBP eCLIP19.73■□□□□ 0.755e-8■■□□□ 11.4
PTK2-218ENST00000519993 HNRNPKP61978 463 aaKnown RBP eCLIP16.27■□□□□ 0.197e-8■■■■□ 21.8
PTK2-218ENST00000519993 AATFQ9NY61 560 aaKnown RBP eCLIP19.86■□□□□ 0.771e-7■■■■■ 52.1
PTK2-218ENST00000519993 TIA1P31483 386 aaKnown RBP eCLIP17■□□□□ 0.311e-7■■□□□ 13.3
PTK2-218ENST00000519993 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.73■□□□□ 0.751e-7■■■□□ 14.9
PTK2-218ENST00000519993 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.5■□□□□ 0.392e-7■■□□□ 13.8
PTK2-218ENST00000519993 UPF1Q92900 1129 aaKnown RBP eCLIP17.39■□□□□ 0.372e-7■■■□□ 17.4
PTK2-218ENST00000519993 PRPF4O43172 522 aaKnown RBP eCLIP18.07■□□□□ 0.482e-7■■■■■ 32.7
PTK2-218ENST00000519993 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.93□□□□□ -0.022e-7■■■■□ 23.9
PTK2-218ENST00000519993 SRSF9Q13242 221 aaKnown RBP eCLIP14.58□□□□□ -0.082e-7■■□□□ 13.7
PTK2-218ENST00000519993 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.74■□□□□ 0.912e-7■■■□□ 14.9
PTK2-218ENST00000519993 SF3B4Q15427 424 aaKnown RBP eCLIP16.65■□□□□ 0.262e-7■■■■□ 25.6
PTK2-218ENST00000519993 GTF2F1P35269 517 aaKnown RBP eCLIP20.38■□□□□ 0.853e-7■■■■■ 34.8
PTK2-218ENST00000519993 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.48■□□□□ 0.393e-7■■■■■ 34.8
PTK2-218ENST00000519993 RBM22Q9NW64 420 aaKnown RBP eCLIP18.09■□□□□ 0.493e-7■■■■■ 26.9
PTK2-218ENST00000519993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.79■■□□□ 1.43e-7■■■■□ 25.2
PTK2-218ENST00000519993 U2AF2P26368 475 aaKnown RBP eCLIP20.29■□□□□ 0.843e-7■■■□□ 15.8
PTK2-218ENST00000519993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.2■■□□□ 1.143e-7■■■■■ 38.3
PTK2-218ENST00000519993 HNRNPLP14866 589 aaKnown RBP eCLIP17.96■□□□□ 0.474e-7■■□□□ 12.5
PTK2-218ENST00000519993 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.11■□□□□ 0.814e-7■■□□□ 11.5
PTK2-218ENST00000519993 HNRNPCP07910 306 aaKnown RBP eCLIP18.26■□□□□ 0.514e-7■□□□□ 10.5
PTK2-218ENST00000519993 SFPQP23246 707 aaKnown RBP eCLIP20.71■□□□□ 0.915e-7■■□□□ 14.5
PTK2-218ENST00000519993 PTBP1P26599 531 aaKnown RBP eCLIP16.26■□□□□ 0.195e-7■■■■□ 25.8
PTK2-218ENST00000519993 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.14■□□□□ 0.335e-7■■■■■ 31.4
PTK2-218ENST00000519993 ZNF622Q969S3 477 aaKnown RBP eCLIP19.69■□□□□ 0.746e-7■■□□□ 12.7
PTK2-218ENST00000519993 PCBP2Q15366 365 aaKnown RBP eCLIP17.11■□□□□ 0.336e-7■■■■■ 42
PTK2-218ENST00000519993 PPIGQ13427 754 aaKnown RBP eCLIP17.04■□□□□ 0.327e-7■■□□□ 11.8
PTK2-218ENST00000519993 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.55■□□□□ 0.47e-7■■■■□ 24.7
PTK2-218ENST00000519993 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.41■□□□□ 0.228e-7■□□□□ 11.2
PTK2-218ENST00000519993 RBM15Q96T37 977 aaKnown RBP eCLIP18.79■□□□□ 0.68e-7■■■□□ 17.5
PTK2-218ENST00000519993 XRCC6P12956 609 aaKnown RBP eCLIP21.19■□□□□ 0.989e-7■■■■■ 34.5
PTK2-218ENST00000519993 MATR3P43243 847 aaKnown RBP eCLIP20.2■□□□□ 0.829e-7■■■■■ 27.3
PTK2-218ENST00000519993 KHSRPQ92945 711 aaKnown RBP eCLIP17.19■□□□□ 0.341e-6■■■■□ 24.8
PTK2-218ENST00000519993 EFTUD2Q15029 972 aaKnown RBP eCLIP18.39■□□□□ 0.531e-6■■□□□ 12.9
PTK2-218ENST00000519993 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.19■■□□□ 1.141e-6■■■□□ 19.1
PTK2-218ENST00000519993 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.07■□□□□ 0.641e-6■■□□□ 13.2
PTK2-218ENST00000519993 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.77■□□□□ 0.761e-6■■■■■ 211.5
PTK2-218ENST00000519993 TARDBPQ13148 414 aaKnown RBP eCLIP17.2■□□□□ 0.341e-6■■■■□ 21.2
PTK2-218ENST00000519993 EWSR1Q01844 656 aaKnown RBP eCLIP15.46■□□□□ 0.071e-6■■■■■ 26.8
PTK2-218ENST00000519993 HNRNPMP52272 730 aaKnown RBP eCLIP22.82■■□□□ 1.241e-6■■■■□ 24
PTK2-218ENST00000519993 SF3B1O75533 1304 aaKnown RBP eCLIP17.53■□□□□ 0.41e-6■■■■■ 80.5
PTK2-218ENST00000519993 GPKOWQ92917 476 aaPredicted RBP eCLIP19.72■□□□□ 0.751e-6■■□□□ 14.5
PTK2-218ENST00000519993 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.03■□□□□ 0.161e-6■■■■■ 36.1
PTK2-218ENST00000519993 EIF4G2P78344 907 aaKnown RBP eCLIP24■■□□□ 1.431e-6■■■■□ 21.9
PTK2-218ENST00000519993 AQRO60306 1485 aaKnown RBP eCLIP22.34■■□□□ 1.172e-6■■■■□ 24.7
PTK2-218ENST00000519993 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.28■□□□□ 0.522e-6■■■■■ 64.5
PTK2-218ENST00000519993 FXR2P51116 673 aaKnown RBP eCLIP18.9■□□□□ 0.622e-6■■■□□ 17.7
PTK2-218ENST00000519993 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.44■□□□□ 0.862e-6■■□□□ 11.5
PTK2-218ENST00000519993 FMR1Q06787 632 aaKnown RBP eCLIP19.44■□□□□ 0.74e-6■■□□□ 11.8
PTK2-218ENST00000519993 SF3A3Q12874 501 aaKnown RBP eCLIP19.65■□□□□ 0.744e-6■■□□□ 13
PTK2-218ENST00000519993 HLTFQ14527 1009 aaKnown RBP eCLIP20.1■□□□□ 0.818e-6■■■■□ 21.3
PTK2-218ENST00000519993 DKC1O60832 514 aaKnown RBP eCLIP19.16■□□□□ 0.661e-5■■■■□ 25.7
PTK2-218ENST00000519993 PUS1Q9Y606 427 aaKnown RBP eCLIP16.02■□□□□ 0.161e-5■■■■■ 49.7
Retrieved 68 of 68 RNA–protein pairs in 13.9 ms