RNA–Protein interactions for RNA: ENST00000519938.5

IKBKB-213, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2

Gene IKBKB, Length 2,403 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-213ENST00000519938 NISCHQ9Y2I1 1504 aa37.28■■■■□ 3.56
IKBKB-213ENST00000519938 CCDC180Q9P1Z9 1646 aa31.88■■■□□ 2.69
IKBKB-213ENST00000519938 ZCCHC6Q5VYS8 1495 aaKnown RBP31.5■■■□□ 2.63
IKBKB-213ENST00000519938 SHROOM4Q9ULL8 1493 aa31.35■■■□□ 2.61
IKBKB-213ENST00000519938 DCAF8L2P0C7V8 631 aa30.74■■■□□ 2.51
IKBKB-213ENST00000519938 DCAF1Q9Y4B6 1507 aa30.73■■■□□ 2.51
IKBKB-213ENST00000519938 SUPT5HO00267 1087 aaKnown RBP30.71■■■□□ 2.51
IKBKB-213ENST00000519938 MYO15BQ96JP2 1530 aa29.97■■■□□ 2.39
IKBKB-213ENST00000519938 CHIC1Q5VXU3 224 aa29.86■■■□□ 2.37
IKBKB-213ENST00000519938 ABCC9O60706 1549 aa29.65■■■□□ 2.34
IKBKB-213ENST00000519938 SCRIBQ14160 1630 aa29.64■■■□□ 2.33
IKBKB-213ENST00000519938 NACADO15069 1562 aa29.53■■■□□ 2.32
IKBKB-213ENST00000519938 RSF1Q96T23 1441 aaPredicted RBP29.38■■■□□ 2.29
IKBKB-213ENST00000519938 RB1CC1Q8TDY2 1594 aa29.07■■■□□ 2.24
IKBKB-213ENST00000519938 CECR2Q9BXF3 1484 aa28.97■■■□□ 2.23
IKBKB-213ENST00000519938 MROH2BQ7Z745 1585 aa28.89■■■□□ 2.21
IKBKB-213ENST00000519938 LOC105371045A0A1W2PR82 267 aa28.85■■■□□ 2.21
IKBKB-213ENST00000519938 TRIM41Q8WV44 630 aa28.74■■■□□ 2.19
IKBKB-213ENST00000519938 WIZO95785 1651 aa28.7■■■□□ 2.18
IKBKB-213ENST00000519938 BAZ1AQ9NRL2 1556 aaPredicted RBP28.68■■■□□ 2.18
IKBKB-213ENST00000519938 PCGF6Q9BYE7 350 aa28.63■■■□□ 2.17
IKBKB-213ENST00000519938 HRCP23327 699 aa28.59■■■□□ 2.17
IKBKB-213ENST00000519938 UNC13AQ9UPW8 1703 aa28.49■■■□□ 2.15
IKBKB-213ENST00000519938 SMARCA4P51532 1647 aa28.42■■■□□ 2.14
IKBKB-213ENST00000519938 TOP2AP11388 1531 aaKnown RBP28.36■■■□□ 2.13
IKBKB-213ENST00000519938 FAM9AQ8IZU1 332 aaPredicted RBP28.32■■■□□ 2.12
IKBKB-213ENST00000519938 TRIM26Q12899 539 aaPredicted RBP28.29■■■□□ 2.12
IKBKB-213ENST00000519938 EIF4G1Q04637 1599 aaKnown RBP28.28■■■□□ 2.12
IKBKB-213ENST00000519938 BICRAQ9NZM4 1560 aa28.18■■■□□ 2.1
IKBKB-213ENST00000519938 CCDC88BA6NC98 1476 aa28.18■■■□□ 2.1
IKBKB-213ENST00000519938 SMARCA2P51531 1590 aa28.15■■■□□ 2.1
IKBKB-213ENST00000519938 PABPN1Q86U42 306 aaKnown RBP eCLIP28.1■■■□□ 2.09
IKBKB-213ENST00000519938 PEG3Q9GZU2 1588 aa27.98■■■□□ 2.07
IKBKB-213ENST00000519938 EHMT2Q96KQ7 1210 aa27.96■■■□□ 2.07
IKBKB-213ENST00000519938 ABCC8Q09428 1581 aa27.93■■■□□ 2.06
IKBKB-213ENST00000519938 PPARGC1BQ86YN6 1023 aaKnown RBP27.82■■■□□ 2.04
IKBKB-213ENST00000519938 ATAD2BQ9ULI0 1458 aa27.74■■■□□ 2.03
IKBKB-213ENST00000519938 EEA1Q15075 1411 aa27.71■■■□□ 2.03
IKBKB-213ENST00000519938 ZEB1P37275 1124 aaPredicted RBP27.68■■■□□ 2.02
IKBKB-213ENST00000519938 SOGA1O94964 1423 aa27.67■■■□□ 2.02
IKBKB-213ENST00000519938 BAZ1BQ9UIG0 1483 aaKnown RBP27.65■■■□□ 2.02
IKBKB-213ENST00000519938 WRNQ14191 1432 aaPredicted RBP eCLIP27.61■■■□□ 2.01
IKBKB-213ENST00000519938 CSRNP3Q8WYN3 585 aa27.59■■■□□ 2.01
IKBKB-213ENST00000519938 TNIKQ9UKE5 1360 aa27.55■■■□□ 2
IKBKB-213ENST00000519938 RUSC2Q8N2Y8 1516 aa27.5■■□□□ 1.99
IKBKB-213ENST00000519938 CEP162Q5TB80 1403 aa27.49■■□□□ 1.99
IKBKB-213ENST00000519938 SYNJ1O43426 1573 aa27.43■■□□□ 1.98
IKBKB-213ENST00000519938 GOLGA3Q08378 1498 aa27.41■■□□□ 1.98
IKBKB-213ENST00000519938 UBTFP17480 764 aaKnown RBP27.38■■□□□ 1.97
IKBKB-213ENST00000519938 NCAPD3P42695 1498 aa27.31■■□□□ 1.96
IKBKB-213ENST00000519938 CEP164Q9UPV0 1460 aa27.3■■□□□ 1.96
IKBKB-213ENST00000519938 HMGXB3Q12766 1538 aa27.29■■□□□ 1.96
IKBKB-213ENST00000519938 KIF21BO75037 1637 aa27.26■■□□□ 1.96
IKBKB-213ENST00000519938 TOP2BQ02880 1626 aa27.2■■□□□ 1.95
IKBKB-213ENST00000519938 BIVM-ERCC5R4GMW8 1640 aa27.12■■□□□ 1.93
IKBKB-213ENST00000519938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.05■■□□□ 1.92
IKBKB-213ENST00000519938 CLIP1P30622 1438 aa27.05■■□□□ 1.92
IKBKB-213ENST00000519938 CCER1Q8TC90 406 aaPredicted RBP27.05■■□□□ 1.92
IKBKB-213ENST00000519938 TTBK1Q5TCY1 1321 aaPredicted RBP27.03■■□□□ 1.92
IKBKB-213ENST00000519938 RAPGEF2Q9Y4G8 1499 aa27.02■■□□□ 1.92
IKBKB-213ENST00000519938 CFTRP13569 1480 aa27■■□□□ 1.91
IKBKB-213ENST00000519938 VPS8Q8N3P4 1428 aa26.93■■□□□ 1.9
IKBKB-213ENST00000519938 CUX1P39880 1505 aa26.92■■□□□ 1.9
IKBKB-213ENST00000519938 ERICH3Q5RHP9 1530 aa26.9■■□□□ 1.9
IKBKB-213ENST00000519938 PRXQ9BXM0 1461 aa26.88■■□□□ 1.89
IKBKB-213ENST00000519938 KIF27Q86VH2 1401 aa26.82■■□□□ 1.88
IKBKB-213ENST00000519938 APLP2Q06481 763 aa26.8■■□□□ 1.88
IKBKB-213ENST00000519938 PRDM2Q13029 1718 aa26.78■■□□□ 1.88
IKBKB-213ENST00000519938 CADPSQ9ULU8 1353 aa26.73■■□□□ 1.87
IKBKB-213ENST00000519938 RANGAP1P46060 587 aaPredicted RBP26.71■■□□□ 1.87
IKBKB-213ENST00000519938 CC2D2AQ9P2K1 1620 aa26.62■■□□□ 1.85
IKBKB-213ENST00000519938 ARAP1Q96P48 1450 aa26.61■■□□□ 1.85
IKBKB-213ENST00000519938 HNRNPUL2Q1KMD3 747 aaKnown RBP26.57■■□□□ 1.84
IKBKB-213ENST00000519938 CUX2O14529 1486 aa26.54■■□□□ 1.84
IKBKB-213ENST00000519938 IGF1RP08069 1367 aa26.52■■□□□ 1.84
IKBKB-213ENST00000519938 FGD5Q6ZNL6 1462 aa26.48■■□□□ 1.83
IKBKB-213ENST00000519938 ARHGAP35Q9NRY4 1499 aa26.43■■□□□ 1.82
IKBKB-213ENST00000519938 FANCD2Q9BXW9 1451 aa26.43■■□□□ 1.82
IKBKB-213ENST00000519938 CARMIL1Q5VZK9 1371 aa26.4■■□□□ 1.82
IKBKB-213ENST00000519938 DIEXFQ68CQ4 756 aaKnown RBP26.4■■□□□ 1.82
IKBKB-213ENST00000519938 KANK4Q5T7N3 995 aaPredicted RBP26.39■■□□□ 1.81
IKBKB-213ENST00000519938 ZNF316A6NFI3 1004 aaPredicted RBP26.32■■□□□ 1.8
IKBKB-213ENST00000519938 DNMBPQ6XZF7 1577 aa26.31■■□□□ 1.8
IKBKB-213ENST00000519938 RRBP1Q9P2E9 1410 aaKnown RBP26.29■■□□□ 1.8
IKBKB-213ENST00000519938 ABCA10Q8WWZ4 1543 aa26.24■■□□□ 1.79
IKBKB-213ENST00000519938 TOPBP1Q92547 1522 aa26.24■■□□□ 1.79
IKBKB-213ENST00000519938 CLSPNQ9HAW4 1339 aa26.23■■□□□ 1.79
IKBKB-213ENST00000519938 MAP3K1Q13233 1512 aa26.23■■□□□ 1.79
IKBKB-213ENST00000519938 POLA1P09884 1462 aaPredicted RBP26.2■■□□□ 1.78
IKBKB-213ENST00000519938 NESP48681 1621 aa26.2■■□□□ 1.78
IKBKB-213ENST00000519938 RAD54L2Q9Y4B4 1467 aa26.18■■□□□ 1.78
IKBKB-213ENST00000519938 CCNB3Q8WWL7 1395 aa26.17■■□□□ 1.78
IKBKB-213ENST00000519938 LAMC3Q9Y6N6 1575 aa26.16■■□□□ 1.78
IKBKB-213ENST00000519938 TIAM1Q13009 1591 aa26.13■■□□□ 1.77
IKBKB-213ENST00000519938 FHAD1B1AJZ9 1412 aa26.13■■□□□ 1.77
IKBKB-213ENST00000519938 DHX57Q6P158 1386 aaKnown RBP26.13■■□□□ 1.77
IKBKB-213ENST00000519938 SCAF1Q9H7N4 1312 aaKnown RBP26.09■■□□□ 1.77
IKBKB-213ENST00000519938 CUL7Q14999 1698 aa26.08■■□□□ 1.77
IKBKB-213ENST00000519938 LRRC9Q6ZRR7 1453 aa26.05■■□□□ 1.76
IKBKB-213ENST00000519938 ACIN1Q9UKV3 1341 aaKnown RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms