RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
SDC2-204ENST00000519914 CHIC1Q5VXU3 224 aa18.41■□□□□ 0.54
SDC2-204ENST00000519914 SENP3Q9H4L4 574 aaPredicted RBP16.51■□□□□ 0.23
SDC2-204ENST00000519914 PHF23Q9BUL5 403 aaPredicted RBP16.36■□□□□ 0.21
SDC2-204ENST00000519914 FOXD1Q16676 465 aa15.44■□□□□ 0.06
SDC2-204ENST00000519914 PLPPR3Q6T4P5 718 aa14.71□□□□□ -0.05
SDC2-204ENST00000519914 PPP6R1Q9UPN7 881 aa14.47□□□□□ -0.09
SDC2-204ENST00000519914 ADRA2BP18089 450 aa14.46□□□□□ -0.09
SDC2-204ENST00000519914 PIAS4Q8N2W9 510 aaPredicted RBP14.45□□□□□ -0.1
SDC2-204ENST00000519914 MSH5O43196 834 aa14.4□□□□□ -0.1
SDC2-204ENST00000519914 POTEDQ86YR6 584 aa14.09□□□□□ -0.15
SDC2-204ENST00000519914 MAPK8IP2Q13387 824 aaPredicted RBP13.29□□□□□ -0.28
SDC2-204ENST00000519914 SCAF1Q9H7N4 1312 aaKnown RBP13.15□□□□□ -0.3
SDC2-204ENST00000519914 DMRT2Q9Y5R5 561 aa13.1□□□□□ -0.31
SDC2-204ENST00000519914 PPP4R3CPQ6ZMV5 832 aa12.94□□□□□ -0.34
SDC2-204ENST00000519914 DCAF8L1A6NGE4 600 aa12.71□□□□□ -0.37
SDC2-204ENST00000519914 CNKSR2Q8WXI2 1034 aa12.65□□□□□ -0.38
SDC2-204ENST00000519914 HOXD11P31277 338 aaPredicted RBP12.6□□□□□ -0.39
SDC2-204ENST00000519914 RNF216Q9NWF9 866 aaPredicted RBP12.52□□□□□ -0.41
SDC2-204ENST00000519914 CACNB1Q02641 598 aaPredicted RBP12.43□□□□□ -0.42
SDC2-204ENST00000519914 NCBP3Q53F19 620 aaKnown RBP12.41□□□□□ -0.42
SDC2-204ENST00000519914 RNF39Q9H2S5 420 aa12.29□□□□□ -0.44
SDC2-204ENST00000519914 NPM3O75607 178 aaKnown RBP12.25□□□□□ -0.45
SDC2-204ENST00000519914 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.11□□□□□ -0.473e-7■□□□□ 11
SDC2-204ENST00000519914 C1QBPQ07021 282 aaKnown RBP12.1□□□□□ -0.47
SDC2-204ENST00000519914 KCNA4P22459 653 aa12.06□□□□□ -0.48
SDC2-204ENST00000519914 DNAJC5BQ9UF47 199 aa12.06□□□□□ -0.48
SDC2-204ENST00000519914 U3KPZ7 1027 aaPredicted RBP11.8□□□□□ -0.52
SDC2-204ENST00000519914 SLC4A2P04920 1241 aa11.7□□□□□ -0.54
SDC2-204ENST00000519914 CAPN15O75808 1086 aa11.68□□□□□ -0.54
SDC2-204ENST00000519914 SPINK5Q9NQ38 1064 aaPredicted RBP11.68□□□□□ -0.54
SDC2-204ENST00000519914 DSG3P32926 999 aa11.54□□□□□ -0.56
SDC2-204ENST00000519914 TRHP20396 242 aaPredicted RBP11.51□□□□□ -0.57
SDC2-204ENST00000519914 ABCB7O75027 752 aa11.43□□□□□ -0.58
SDC2-204ENST00000519914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.42□□□□□ -0.58
SDC2-204ENST00000519914 APLP2Q06481 763 aa11.42□□□□□ -0.58
SDC2-204ENST00000519914 HNRNPUL2Q1KMD3 747 aaKnown RBP11.42□□□□□ -0.58
SDC2-204ENST00000519914 SLC4A1APQ9BWU0 796 aaKnown RBP11.38□□□□□ -0.59
SDC2-204ENST00000519914 SAMD1Q6SPF0 538 aaPredicted RBP11.37□□□□□ -0.59
SDC2-204ENST00000519914 ZNF219Q9P2Y4 722 aaPredicted RBP11.37□□□□□ -0.59
SDC2-204ENST00000519914 MYCNP04198 464 aaPredicted RBP11.31□□□□□ -0.6
SDC2-204ENST00000519914 FOXD4L1Q9NU39 408 aa11.2□□□□□ -0.62
SDC2-204ENST00000519914 POLA2Q14181 598 aa11.17□□□□□ -0.62
SDC2-204ENST00000519914 ATF5Q9Y2D1 282 aaPredicted RBP11.11□□□□□ -0.63
SDC2-204ENST00000519914 ZBTB22O15209 634 aa11.07□□□□□ -0.64
SDC2-204ENST00000519914 POTEHQ6S545 545 aa11.05□□□□□ -0.64
SDC2-204ENST00000519914 RBM42Q9BTD8 480 aaKnown RBP10.97□□□□□ -0.65
SDC2-204ENST00000519914 ZBTB12Q9Y330 459 aaPredicted RBP10.84□□□□□ -0.67
SDC2-204ENST00000519914 ATXN8OSP0DMR3 200 aa10.81□□□□□ -0.68
SDC2-204ENST00000519914 OSCARQ8IYS5 282 aa10.8□□□□□ -0.68
SDC2-204ENST00000519914 NISCHQ9Y2I1 1504 aa10.79□□□□□ -0.68
SDC2-204ENST00000519914 CHRDL2Q6WN34 429 aa10.78□□□□□ -0.68
SDC2-204ENST00000519914 AKT1S1Q96B36 256 aa10.74□□□□□ -0.69
SDC2-204ENST00000519914 REM2Q8IYK8 340 aaPredicted RBP10.67□□□□□ -0.7
SDC2-204ENST00000519914 FBLN2P98095 1184 aa10.65□□□□□ -0.7
SDC2-204ENST00000519914 CSRNP3Q8WYN3 585 aa10.58□□□□□ -0.72
SDC2-204ENST00000519914 PITPNM1O00562 1244 aa10.57□□□□□ -0.72
SDC2-204ENST00000519914 MKRN4PQ13434 485 aaPredicted RBP10.57□□□□□ -0.72
SDC2-204ENST00000519914 SPDYE2BA6NHP3 402 aa10.53□□□□□ -0.72
SDC2-204ENST00000519914 SPDYE6P0CI01 402 aa10.53□□□□□ -0.72
SDC2-204ENST00000519914 SPDYE2Q495Y8 402 aa10.53□□□□□ -0.72
SDC2-204ENST00000519914 PIP4P2Q8N4L2 257 aa10.53□□□□□ -0.72
SDC2-204ENST00000519914 EHMT2Q96KQ7 1210 aa10.52□□□□□ -0.73
SDC2-204ENST00000519914 ZNF692Q9BU19 519 aaPredicted RBP10.47□□□□□ -0.73
SDC2-204ENST00000519914 CLEC11AQ9Y240 323 aa10.45□□□□□ -0.74
SDC2-204ENST00000519914 FXR2P51116 673 aaKnown RBP eCLIP10.43□□□□□ -0.749e-14■□□□□ 8.9
SDC2-204ENST00000519914 HAX1O00165 279 aa10.39□□□□□ -0.75
SDC2-204ENST00000519914 SPDYE1Q8NFV5 336 aaPredicted RBP10.37□□□□□ -0.75
SDC2-204ENST00000519914 SSUH2Q9Y2M2 353 aa10.37□□□□□ -0.75
SDC2-204ENST00000519914 SP7Q8TDD2 431 aaPredicted RBP10.34□□□□□ -0.75
SDC2-204ENST00000519914 PABPN1Q86U42 306 aaKnown RBP eCLIP10.33□□□□□ -0.76
SDC2-204ENST00000519914 PRKAR2AP13861 404 aaKnown RBP10.32□□□□□ -0.76
SDC2-204ENST00000519914 EVX2Q03828 476 aa10.25□□□□□ -0.77
SDC2-204ENST00000519914 CHADLQ6NUI6 762 aa10.24□□□□□ -0.77
SDC2-204ENST00000519914 PRR29P0C7W0 189 aa10.23□□□□□ -0.77
SDC2-204ENST00000519914 C19orf67A6NJJ6 358 aa10.1□□□□□ -0.79
SDC2-204ENST00000519914 SPDYE4A6NLX3 237 aa10.09□□□□□ -0.79
SDC2-204ENST00000519914 FARP1Q9Y4F1 1045 aaPredicted RBP10.03□□□□□ -0.8
SDC2-204ENST00000519914 GABBR2O75899 941 aa9.99□□□□□ -0.81
SDC2-204ENST00000519914 CD44P16070 742 aaKnown RBP9.98□□□□□ -0.81
SDC2-204ENST00000519914 STAG3Q9UJ98 1225 aa9.98□□□□□ -0.81
SDC2-204ENST00000519914 CREBZFQ9NS37 354 aa9.94□□□□□ -0.82
SDC2-204ENST00000519914 ZRANB1Q9UGI0 708 aa9.86□□□□□ -0.83
SDC2-204ENST00000519914 POTEIP0CG38 1075 aa9.77□□□□□ -0.85
SDC2-204ENST00000519914 NPM1P06748 294 aaKnown RBP eCLIP9.76□□□□□ -0.85
SDC2-204ENST00000519914 ZNF579Q8NAF0 562 aaKnown RBP9.76□□□□□ -0.85
SDC2-204ENST00000519914 PAK3O75914 559 aaPredicted RBP9.75□□□□□ -0.85
SDC2-204ENST00000519914 DCBLD2Q96PD2 775 aa9.75□□□□□ -0.85
SDC2-204ENST00000519914 MNX1P50219 401 aaPredicted RBP9.74□□□□□ -0.85
SDC2-204ENST00000519914 LHX8Q68G74 356 aa9.74□□□□□ -0.85
SDC2-204ENST00000519914 PROM2Q8N271 834 aa9.74□□□□□ -0.85
SDC2-204ENST00000519914 PHF12Q96QT6 1004 aa9.74□□□□□ -0.85
SDC2-204ENST00000519914 CLCN6P51797 869 aa9.72□□□□□ -0.85
SDC2-204ENST00000519914 GALR2O43603 387 aaPredicted RBP9.71□□□□□ -0.86
SDC2-204ENST00000519914 MIER1Q8N108 512 aa9.68□□□□□ -0.86
SDC2-204ENST00000519914 TSPYL2Q9H2G4 693 aaPredicted RBP9.67□□□□□ -0.86
SDC2-204ENST00000519914 FKBP8Q14318 412 aa9.63□□□□□ -0.87
SDC2-204ENST00000519914 PLEKHG5O94827 1062 aa9.61□□□□□ -0.87
SDC2-204ENST00000519914 PLCD3Q8N3E9 789 aa9.58□□□□□ -0.88
SDC2-204ENST00000519914 MS4A3Q96HJ5 214 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms