RNA–Protein interactions for RNA: ENST00000519108.5

HDAC2-206, Transcript of histone deacetylase 2, humanhuman

TSL 2 BASIC

Gene HDAC2, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-206ENST00000519108 NISCHQ9Y2I1 1504 aa30.1■■■□□ 2.41
HDAC2-206ENST00000519108 SHROOM4Q9ULL8 1493 aa25.59■■□□□ 1.69
HDAC2-206ENST00000519108 CCDC180Q9P1Z9 1646 aa25.56■■□□□ 1.68
HDAC2-206ENST00000519108 ZCCHC6Q5VYS8 1495 aaKnown RBP25.49■■□□□ 1.67
HDAC2-206ENST00000519108 SUPT5HO00267 1087 aaKnown RBP25.24■■□□□ 1.63
HDAC2-206ENST00000519108 DCAF1Q9Y4B6 1507 aa24.79■■□□□ 1.56
HDAC2-206ENST00000519108 DCAF8L2P0C7V8 631 aa24.77■■□□□ 1.56
HDAC2-206ENST00000519108 CHIC1Q5VXU3 224 aa24.71■■□□□ 1.55
HDAC2-206ENST00000519108 MYO15BQ96JP2 1530 aa24.55■■□□□ 1.52
HDAC2-206ENST00000519108 HRCP23327 699 aa24.26■■□□□ 1.47
HDAC2-206ENST00000519108 ABCC9O60706 1549 aa24.06■■□□□ 1.44
HDAC2-206ENST00000519108 PCGF6Q9BYE7 350 aa24.05■■□□□ 1.44
HDAC2-206ENST00000519108 LOC105371045A0A1W2PR82 267 aa23.9■■□□□ 1.42
HDAC2-206ENST00000519108 RSF1Q96T23 1441 aaPredicted RBP23.86■■□□□ 1.41
HDAC2-206ENST00000519108 SCRIBQ14160 1630 aa23.84■■□□□ 1.41
HDAC2-206ENST00000519108 TRIM26Q12899 539 aaPredicted RBP23.68■■□□□ 1.38
HDAC2-206ENST00000519108 RB1CC1Q8TDY2 1594 aa23.67■■□□□ 1.38
HDAC2-206ENST00000519108 NACADO15069 1562 aa23.6■■□□□ 1.37
HDAC2-206ENST00000519108 TRIM41Q8WV44 630 aa23.59■■□□□ 1.37
HDAC2-206ENST00000519108 PPARGC1BQ86YN6 1023 aaKnown RBP23.56■■□□□ 1.36
HDAC2-206ENST00000519108 CECR2Q9BXF3 1484 aa23.38■■□□□ 1.33
HDAC2-206ENST00000519108 MROH2BQ7Z745 1585 aa23.34■■□□□ 1.33
HDAC2-206ENST00000519108 ZEB1P37275 1124 aaPredicted RBP23.33■■□□□ 1.32
HDAC2-206ENST00000519108 FAM9AQ8IZU1 332 aaPredicted RBP23.27■■□□□ 1.32
HDAC2-206ENST00000519108 WIZO95785 1651 aa23.22■■□□□ 1.31
HDAC2-206ENST00000519108 BAZ1AQ9NRL2 1556 aaPredicted RBP23.15■■□□□ 1.3
HDAC2-206ENST00000519108 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
HDAC2-206ENST00000519108 EHMT2Q96KQ7 1210 aa22.98■■□□□ 1.27
HDAC2-206ENST00000519108 TOP2AP11388 1531 aaKnown RBP22.93■■□□□ 1.26
HDAC2-206ENST00000519108 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
HDAC2-206ENST00000519108 CCDC88BA6NC98 1476 aa22.82■■□□□ 1.24
HDAC2-206ENST00000519108 SMARCA2P51531 1590 aa22.78■■□□□ 1.24
HDAC2-206ENST00000519108 UNC13AQ9UPW8 1703 aa22.72■■□□□ 1.23
HDAC2-206ENST00000519108 ABCC8Q09428 1581 aa22.72■■□□□ 1.23
HDAC2-206ENST00000519108 WRNQ14191 1432 aaPredicted RBP eCLIP22.7■■□□□ 1.22
HDAC2-206ENST00000519108 EEA1Q15075 1411 aa22.66■■□□□ 1.22
HDAC2-206ENST00000519108 TNIKQ9UKE5 1360 aa22.62■■□□□ 1.21
HDAC2-206ENST00000519108 CCER1Q8TC90 406 aaPredicted RBP22.59■■□□□ 1.21
HDAC2-206ENST00000519108 CEP162Q5TB80 1403 aa22.59■■□□□ 1.21
HDAC2-206ENST00000519108 SOGA1O94964 1423 aa22.57■■□□□ 1.2
HDAC2-206ENST00000519108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.57■■□□□ 1.2
HDAC2-206ENST00000519108 CSRNP3Q8WYN3 585 aa22.55■■□□□ 1.2
HDAC2-206ENST00000519108 PELP1Q8IZL8 1130 aaKnown RBP22.54■■□□□ 1.2
HDAC2-206ENST00000519108 PEG3Q9GZU2 1588 aa22.48■■□□□ 1.19
HDAC2-206ENST00000519108 BICRAQ9NZM4 1560 aa22.45■■□□□ 1.18
HDAC2-206ENST00000519108 GOLGA3Q08378 1498 aa22.43■■□□□ 1.18
HDAC2-206ENST00000519108 UBTFP17480 764 aaKnown RBP22.43■■□□□ 1.18
HDAC2-206ENST00000519108 RUSC2Q8N2Y8 1516 aa22.43■■□□□ 1.18
HDAC2-206ENST00000519108 PABPN1Q86U42 306 aaKnown RBP eCLIP22.38■■□□□ 1.17
HDAC2-206ENST00000519108 SCAF1Q9H7N4 1312 aaKnown RBP22.37■■□□□ 1.17
HDAC2-206ENST00000519108 CEP164Q9UPV0 1460 aa22.3■■□□□ 1.16
HDAC2-206ENST00000519108 TTBK1Q5TCY1 1321 aaPredicted RBP22.3■■□□□ 1.16
HDAC2-206ENST00000519108 KIF21BO75037 1637 aa22.28■■□□□ 1.16
HDAC2-206ENST00000519108 DIEXFQ68CQ4 756 aaKnown RBP22.26■■□□□ 1.15
HDAC2-206ENST00000519108 ATAD2BQ9ULI0 1458 aa22.25■■□□□ 1.15
HDAC2-206ENST00000519108 SYNJ1O43426 1573 aa22.25■■□□□ 1.15
HDAC2-206ENST00000519108 ACIN1Q9UKV3 1341 aaKnown RBP22.2■■□□□ 1.14
HDAC2-206ENST00000519108 BAZ1BQ9UIG0 1483 aaKnown RBP22.19■■□□□ 1.14
HDAC2-206ENST00000519108 CLIP1P30622 1438 aa22.16■■□□□ 1.14
HDAC2-206ENST00000519108 VPS8Q8N3P4 1428 aa22.1■■□□□ 1.13
HDAC2-206ENST00000519108 CENPBP07199 599 aaPredicted RBP22.1■■□□□ 1.13
HDAC2-206ENST00000519108 ZNF316A6NFI3 1004 aaPredicted RBP22.09■■□□□ 1.13
HDAC2-206ENST00000519108 NEUROD1Q13562 356 aa22.07■■□□□ 1.12
HDAC2-206ENST00000519108 RAPGEF2Q9Y4G8 1499 aa22.03■■□□□ 1.12
HDAC2-206ENST00000519108 APLP2Q06481 763 aa22.03■■□□□ 1.12
HDAC2-206ENST00000519108 TOP2BQ02880 1626 aa22.03■■□□□ 1.12
HDAC2-206ENST00000519108 HNRNPUL2Q1KMD3 747 aaKnown RBP21.97■■□□□ 1.11
HDAC2-206ENST00000519108 BIVM-ERCC5R4GMW8 1640 aa21.95■■□□□ 1.1
HDAC2-206ENST00000519108 DNAJC5BQ9UF47 199 aa21.91■■□□□ 1.1
HDAC2-206ENST00000519108 ERICH3Q5RHP9 1530 aa21.91■■□□□ 1.1
HDAC2-206ENST00000519108 GTF3C3Q9Y5Q9 886 aa21.89■■□□□ 1.09
HDAC2-206ENST00000519108 PRXQ9BXM0 1461 aa21.87■■□□□ 1.09
HDAC2-206ENST00000519108 HMGXB3Q12766 1538 aa21.83■■□□□ 1.09
HDAC2-206ENST00000519108 NCAPD3P42695 1498 aa21.83■■□□□ 1.09
HDAC2-206ENST00000519108 CLSPNQ9HAW4 1339 aa21.79■■□□□ 1.08
HDAC2-206ENST00000519108 RANGAP1P46060 587 aaPredicted RBP21.79■■□□□ 1.08
HDAC2-206ENST00000519108 ARAP1Q96P48 1450 aa21.76■■□□□ 1.07
HDAC2-206ENST00000519108 KIF27Q86VH2 1401 aa21.74■■□□□ 1.07
HDAC2-206ENST00000519108 CUX1P39880 1505 aa21.73■■□□□ 1.07
HDAC2-206ENST00000519108 MIER1Q8N108 512 aa21.72■■□□□ 1.07
HDAC2-206ENST00000519108 CFTRP13569 1480 aa21.68■■□□□ 1.06
HDAC2-206ENST00000519108 CC2D2AQ9P2K1 1620 aa21.65■■□□□ 1.06
HDAC2-206ENST00000519108 DHX57Q6P158 1386 aaKnown RBP21.64■■□□□ 1.06
HDAC2-206ENST00000519108 KANK4Q5T7N3 995 aaPredicted RBP21.63■■□□□ 1.05
HDAC2-206ENST00000519108 RRBP1Q9P2E9 1410 aaKnown RBP21.63■■□□□ 1.05
HDAC2-206ENST00000519108 YTHDC1Q96MU7 727 aaKnown RBP21.62■■□□□ 1.05
HDAC2-206ENST00000519108 MYT1Q01538 1121 aa21.61■■□□□ 1.05
HDAC2-206ENST00000519108 CUX2O14529 1486 aa21.55■■□□□ 1.04
HDAC2-206ENST00000519108 ARHGAP35Q9NRY4 1499 aa21.55■■□□□ 1.04
HDAC2-206ENST00000519108 PRDM2Q13029 1718 aa21.52■■□□□ 1.04
HDAC2-206ENST00000519108 CCNB3Q8WWL7 1395 aa21.51■■□□□ 1.03
HDAC2-206ENST00000519108 IGF1RP08069 1367 aa21.47■■□□□ 1.03
HDAC2-206ENST00000519108 MAP3K1Q13233 1512 aa21.46■■□□□ 1.03
HDAC2-206ENST00000519108 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
HDAC2-206ENST00000519108 CARMIL1Q5VZK9 1371 aa21.39■■□□□ 1.01
HDAC2-206ENST00000519108 TIAM1Q13009 1591 aa21.36■■□□□ 1.01
HDAC2-206ENST00000519108 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
HDAC2-206ENST00000519108 RAB3GAP2Q9H2M9 1393 aa21.3■■□□□ 1
HDAC2-206ENST00000519108 ITGAEP38570 1179 aa21.3■■□□□ 1
HDAC2-206ENST00000519108 LRRC9Q6ZRR7 1453 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms