RNA–Protein interactions for RNA: ENST00000519081.1

RNU6-988P-201, Transcript of RNA, U6 small nuclear 988, pseudogene, humanhuman

BASIC

Gene RNU6-988P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-988P-201ENST00000519081 AEBP2Q6ZN18 517 aaPredicted RBP21.01■□□□□ 0.95
RNU6-988P-201ENST00000519081 CHIC1Q5VXU3 224 aa19.87■□□□□ 0.77
RNU6-988P-201ENST00000519081 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
RNU6-988P-201ENST00000519081 PHF23Q9BUL5 403 aaPredicted RBP17.63■□□□□ 0.41
RNU6-988P-201ENST00000519081 FOXD1Q16676 465 aa16.67■□□□□ 0.26
RNU6-988P-201ENST00000519081 PLPPR3Q6T4P5 718 aa15.82■□□□□ 0.12
RNU6-988P-201ENST00000519081 PPP6R1Q9UPN7 881 aa15.6■□□□□ 0.09
RNU6-988P-201ENST00000519081 MSH5O43196 834 aa15.56■□□□□ 0.08
RNU6-988P-201ENST00000519081 PIAS4Q8N2W9 510 aaPredicted RBP15.51■□□□□ 0.07
RNU6-988P-201ENST00000519081 ADRA2BP18089 450 aa15.5■□□□□ 0.07
RNU6-988P-201ENST00000519081 POTEDQ86YR6 584 aa15.28■□□□□ 0.04
RNU6-988P-201ENST00000519081 MAPK8IP2Q13387 824 aaPredicted RBP14.27□□□□□ -0.13
RNU6-988P-201ENST00000519081 DMRT2Q9Y5R5 561 aa14.18□□□□□ -0.14
RNU6-988P-201ENST00000519081 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
RNU6-988P-201ENST00000519081 PPP4R3CPQ6ZMV5 832 aa13.88□□□□□ -0.19
RNU6-988P-201ENST00000519081 HOXD11P31277 338 aaPredicted RBP13.66□□□□□ -0.22
RNU6-988P-201ENST00000519081 CNKSR2Q8WXI2 1034 aa13.62□□□□□ -0.23
RNU6-988P-201ENST00000519081 RNF216Q9NWF9 866 aaPredicted RBP13.52□□□□□ -0.25
RNU6-988P-201ENST00000519081 DCAF8L1A6NGE4 600 aa13.47□□□□□ -0.25
RNU6-988P-201ENST00000519081 CACNB1Q02641 598 aaPredicted RBP13.34□□□□□ -0.27
RNU6-988P-201ENST00000519081 RNF39Q9H2S5 420 aa13.32□□□□□ -0.28
RNU6-988P-201ENST00000519081 NCBP3Q53F19 620 aaKnown RBP13.27□□□□□ -0.29
RNU6-988P-201ENST00000519081 DNAJC5BQ9UF47 199 aa13.21□□□□□ -0.29
RNU6-988P-201ENST00000519081 NPM3O75607 178 aaKnown RBP13.17□□□□□ -0.3
RNU6-988P-201ENST00000519081 C1QBPQ07021 282 aaKnown RBP13.09□□□□□ -0.31
RNU6-988P-201ENST00000519081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.92□□□□□ -0.34
RNU6-988P-201ENST00000519081 KCNA4P22459 653 aa12.88□□□□□ -0.35
RNU6-988P-201ENST00000519081 U3KPZ7 1027 aaPredicted RBP12.72□□□□□ -0.37
RNU6-988P-201ENST00000519081 SLC4A2P04920 1241 aa12.62□□□□□ -0.39
RNU6-988P-201ENST00000519081 SPINK5Q9NQ38 1064 aaPredicted RBP12.54□□□□□ -0.4
RNU6-988P-201ENST00000519081 DSG3P32926 999 aa12.47□□□□□ -0.41
RNU6-988P-201ENST00000519081 CAPN15O75808 1086 aa12.44□□□□□ -0.42
RNU6-988P-201ENST00000519081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.26□□□□□ -0.45
RNU6-988P-201ENST00000519081 HNRNPUL2Q1KMD3 747 aaKnown RBP12.26□□□□□ -0.45
RNU6-988P-201ENST00000519081 TRHP20396 242 aaPredicted RBP12.24□□□□□ -0.45
RNU6-988P-201ENST00000519081 APLP2Q06481 763 aa12.24□□□□□ -0.45
RNU6-988P-201ENST00000519081 ZNF219Q9P2Y4 722 aaPredicted RBP12.22□□□□□ -0.45
RNU6-988P-201ENST00000519081 SAMD1Q6SPF0 538 aaPredicted RBP12.21□□□□□ -0.45
RNU6-988P-201ENST00000519081 ABCB7O75027 752 aa12.17□□□□□ -0.46
RNU6-988P-201ENST00000519081 MYCNP04198 464 aaPredicted RBP12.14□□□□□ -0.47
RNU6-988P-201ENST00000519081 SLC4A1APQ9BWU0 796 aaKnown RBP12.1□□□□□ -0.47
RNU6-988P-201ENST00000519081 FOXD4L1Q9NU39 408 aa12□□□□□ -0.49
RNU6-988P-201ENST00000519081 POLA2Q14181 598 aa11.94□□□□□ -0.5
RNU6-988P-201ENST00000519081 POTEHQ6S545 545 aa11.94□□□□□ -0.5
RNU6-988P-201ENST00000519081 ATF5Q9Y2D1 282 aaPredicted RBP11.93□□□□□ -0.5
RNU6-988P-201ENST00000519081 ZBTB22O15209 634 aa11.9□□□□□ -0.5
RNU6-988P-201ENST00000519081 RBM42Q9BTD8 480 aaKnown RBP11.81□□□□□ -0.52
RNU6-988P-201ENST00000519081 ATXN8OSP0DMR3 200 aa11.65□□□□□ -0.54
RNU6-988P-201ENST00000519081 ZBTB12Q9Y330 459 aaPredicted RBP11.65□□□□□ -0.54
RNU6-988P-201ENST00000519081 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
RNU6-988P-201ENST00000519081 AKT1S1Q96B36 256 aa11.58□□□□□ -0.56
RNU6-988P-201ENST00000519081 OSCARQ8IYS5 282 aa11.56□□□□□ -0.56
RNU6-988P-201ENST00000519081 REM2Q8IYK8 340 aaPredicted RBP11.49□□□□□ -0.57
RNU6-988P-201ENST00000519081 MKRN4PQ13434 485 aaPredicted RBP11.38□□□□□ -0.59
RNU6-988P-201ENST00000519081 PITPNM1O00562 1244 aa11.36□□□□□ -0.59
RNU6-988P-201ENST00000519081 FBLN2P98095 1184 aa11.34□□□□□ -0.59
RNU6-988P-201ENST00000519081 PIP4P2Q8N4L2 257 aa11.34□□□□□ -0.59
RNU6-988P-201ENST00000519081 SPDYE2BA6NHP3 402 aa11.33□□□□□ -0.6
RNU6-988P-201ENST00000519081 SPDYE6P0CI01 402 aa11.33□□□□□ -0.6
RNU6-988P-201ENST00000519081 SPDYE2Q495Y8 402 aa11.33□□□□□ -0.6
RNU6-988P-201ENST00000519081 FXR2P51116 673 aaKnown RBP eCLIP11.3□□□□□ -0.6
RNU6-988P-201ENST00000519081 CSRNP3Q8WYN3 585 aa11.3□□□□□ -0.6
RNU6-988P-201ENST00000519081 SSUH2Q9Y2M2 353 aa11.22□□□□□ -0.61
RNU6-988P-201ENST00000519081 SP7Q8TDD2 431 aaPredicted RBP11.18□□□□□ -0.62
RNU6-988P-201ENST00000519081 ZNF692Q9BU19 519 aaPredicted RBP11.16□□□□□ -0.62
RNU6-988P-201ENST00000519081 SPDYE1Q8NFV5 336 aaPredicted RBP11.12□□□□□ -0.63
RNU6-988P-201ENST00000519081 HAX1O00165 279 aa11.08□□□□□ -0.64
RNU6-988P-201ENST00000519081 CLEC11AQ9Y240 323 aa11.07□□□□□ -0.64
RNU6-988P-201ENST00000519081 EVX2Q03828 476 aa11.05□□□□□ -0.64
RNU6-988P-201ENST00000519081 PRKAR2AP13861 404 aaKnown RBP11.04□□□□□ -0.64
RNU6-988P-201ENST00000519081 EHMT2Q96KQ7 1210 aa11.03□□□□□ -0.64
RNU6-988P-201ENST00000519081 PABPN1Q86U42 306 aaKnown RBP eCLIP11.02□□□□□ -0.65
RNU6-988P-201ENST00000519081 C19orf67A6NJJ6 358 aa10.93□□□□□ -0.66
RNU6-988P-201ENST00000519081 CHADLQ6NUI6 762 aa10.91□□□□□ -0.66
RNU6-988P-201ENST00000519081 PRR29P0C7W0 189 aa10.9□□□□□ -0.66
RNU6-988P-201ENST00000519081 FARP1Q9Y4F1 1045 aaPredicted RBP10.76□□□□□ -0.69
RNU6-988P-201ENST00000519081 SPDYE4A6NLX3 237 aa10.75□□□□□ -0.69
RNU6-988P-201ENST00000519081 GABBR2O75899 941 aa10.75□□□□□ -0.69
RNU6-988P-201ENST00000519081 CREBZFQ9NS37 354 aa10.7□□□□□ -0.7
RNU6-988P-201ENST00000519081 CD44P16070 742 aaKnown RBP10.68□□□□□ -0.7
RNU6-988P-201ENST00000519081 STAG3Q9UJ98 1225 aa10.68□□□□□ -0.7
RNU6-988P-201ENST00000519081 PROM2Q8N271 834 aa10.59□□□□□ -0.71
RNU6-988P-201ENST00000519081 POTEIP0CG38 1075 aa10.58□□□□□ -0.72
RNU6-988P-201ENST00000519081 MNX1P50219 401 aaPredicted RBP10.55□□□□□ -0.72
RNU6-988P-201ENST00000519081 CLCN6P51797 869 aa10.55□□□□□ -0.72
RNU6-988P-201ENST00000519081 ZNF579Q8NAF0 562 aaKnown RBP10.55□□□□□ -0.72
RNU6-988P-201ENST00000519081 ZRANB1Q9UGI0 708 aa10.51□□□□□ -0.73
RNU6-988P-201ENST00000519081 LHX8Q68G74 356 aa10.48□□□□□ -0.73
RNU6-988P-201ENST00000519081 GALR2O43603 387 aaPredicted RBP10.42□□□□□ -0.74
RNU6-988P-201ENST00000519081 NPM1P06748 294 aaKnown RBP eCLIP10.42□□□□□ -0.74
RNU6-988P-201ENST00000519081 PHF12Q96QT6 1004 aa10.4□□□□□ -0.74
RNU6-988P-201ENST00000519081 DCBLD2Q96PD2 775 aa10.38□□□□□ -0.75
RNU6-988P-201ENST00000519081 PAK3O75914 559 aaPredicted RBP10.36□□□□□ -0.75
RNU6-988P-201ENST00000519081 CCDC61Q9Y6R9 512 aa10.27□□□□□ -0.77
RNU6-988P-201ENST00000519081 PELP1Q8IZL8 1130 aaKnown RBP10.26□□□□□ -0.77
RNU6-988P-201ENST00000519081 MS4A3Q96HJ5 214 aa10.26□□□□□ -0.77
RNU6-988P-201ENST00000519081 TSPYL2Q9H2G4 693 aaPredicted RBP10.25□□□□□ -0.77
RNU6-988P-201ENST00000519081 POTEB2H3BUK9 544 aa10.24□□□□□ -0.77
RNU6-988P-201ENST00000519081 MIER1Q8N108 512 aa10.23□□□□□ -0.77
RNU6-988P-201ENST00000519081 ASTLQ6HA08 431 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms