RNA–Protein interactions for RNA: ENST00000518706.6

AC062004.1-201, humanhuman

TSL 3 BASIC

Gene AC062004.1, Length 686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC062004.1-201ENST00000518706 AEBP2Q6ZN18 517 aaPredicted RBP24.75■■□□□ 1.55
AC062004.1-201ENST00000518706 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
AC062004.1-201ENST00000518706 SENP3Q9H4L4 574 aaPredicted RBP21.34■■□□□ 1.01
AC062004.1-201ENST00000518706 PHF23Q9BUL5 403 aaPredicted RBP20.97■□□□□ 0.95
AC062004.1-201ENST00000518706 FOXD1Q16676 465 aa19.77■□□□□ 0.76
AC062004.1-201ENST00000518706 PLPPR3Q6T4P5 718 aa18.84■□□□□ 0.61
AC062004.1-201ENST00000518706 MSH5O43196 834 aa18.71■□□□□ 0.59
AC062004.1-201ENST00000518706 PIAS4Q8N2W9 510 aaPredicted RBP18.49■□□□□ 0.55
AC062004.1-201ENST00000518706 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.52
AC062004.1-201ENST00000518706 ADRA2BP18089 450 aa18.3■□□□□ 0.52
AC062004.1-201ENST00000518706 POTEDQ86YR6 584 aa18.28■□□□□ 0.52
AC062004.1-201ENST00000518706 SCAF1Q9H7N4 1312 aaKnown RBP17.01■□□□□ 0.31
AC062004.1-201ENST00000518706 DMRT2Q9Y5R5 561 aa16.86■□□□□ 0.29
AC062004.1-201ENST00000518706 MAPK8IP2Q13387 824 aaPredicted RBP16.8■□□□□ 0.28
AC062004.1-201ENST00000518706 PPP4R3CPQ6ZMV5 832 aa16.43■□□□□ 0.22
AC062004.1-201ENST00000518706 CNKSR2Q8WXI2 1034 aa16.22■□□□□ 0.19
AC062004.1-201ENST00000518706 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
AC062004.1-201ENST00000518706 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
AC062004.1-201ENST00000518706 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
AC062004.1-201ENST00000518706 CACNB1Q02641 598 aaPredicted RBP16.06■□□□□ 0.16
AC062004.1-201ENST00000518706 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
AC062004.1-201ENST00000518706 RNF39Q9H2S5 420 aa15.86■□□□□ 0.13
AC062004.1-201ENST00000518706 DNAJC5BQ9UF47 199 aa15.82■□□□□ 0.12
AC062004.1-201ENST00000518706 C1QBPQ07021 282 aaKnown RBP15.73■□□□□ 0.11
AC062004.1-201ENST00000518706 NPM3O75607 178 aaKnown RBP15.5■□□□□ 0.07
AC062004.1-201ENST00000518706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.47■□□□□ 0.07
AC062004.1-201ENST00000518706 KCNA4P22459 653 aa15.06■□□□□ 0
AC062004.1-201ENST00000518706 U3KPZ7 1027 aaPredicted RBP15.03■□□□□ -0
AC062004.1-201ENST00000518706 CAPN15O75808 1086 aa14.89□□□□□ -0.03
AC062004.1-201ENST00000518706 APLP2Q06481 763 aa14.88□□□□□ -0.03
AC062004.1-201ENST00000518706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.8□□□□□ -0.04
AC062004.1-201ENST00000518706 DSG3P32926 999 aa14.8□□□□□ -0.04
AC062004.1-201ENST00000518706 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
AC062004.1-201ENST00000518706 SPINK5Q9NQ38 1064 aaPredicted RBP14.8□□□□□ -0.04
AC062004.1-201ENST00000518706 SLC4A2P04920 1241 aa14.79□□□□□ -0.04
AC062004.1-201ENST00000518706 ZNF219Q9P2Y4 722 aaPredicted RBP14.68□□□□□ -0.06
AC062004.1-201ENST00000518706 SAMD1Q6SPF0 538 aaPredicted RBP14.65□□□□□ -0.06
AC062004.1-201ENST00000518706 TRHP20396 242 aaPredicted RBP14.6□□□□□ -0.07
AC062004.1-201ENST00000518706 ABCB7O75027 752 aa14.44□□□□□ -0.1
AC062004.1-201ENST00000518706 MYCNP04198 464 aaPredicted RBP14.43□□□□□ -0.1
AC062004.1-201ENST00000518706 POTEHQ6S545 545 aa14.35□□□□□ -0.11
AC062004.1-201ENST00000518706 RBM42Q9BTD8 480 aaKnown RBP14.28□□□□□ -0.12
AC062004.1-201ENST00000518706 SLC4A1APQ9BWU0 796 aaKnown RBP14.28□□□□□ -0.12
AC062004.1-201ENST00000518706 POLA2Q14181 598 aa14.2□□□□□ -0.14
AC062004.1-201ENST00000518706 FOXD4L1Q9NU39 408 aa14.19□□□□□ -0.14
AC062004.1-201ENST00000518706 ZBTB12Q9Y330 459 aaPredicted RBP14.06□□□□□ -0.16
AC062004.1-201ENST00000518706 ATF5Q9Y2D1 282 aaPredicted RBP13.91□□□□□ -0.18
AC062004.1-201ENST00000518706 AKT1S1Q96B36 256 aa13.89□□□□□ -0.19
AC062004.1-201ENST00000518706 ATXN8OSP0DMR3 200 aa13.88□□□□□ -0.19
AC062004.1-201ENST00000518706 CHRDL2Q6WN34 429 aa13.88□□□□□ -0.19
AC062004.1-201ENST00000518706 ZBTB22O15209 634 aa13.75□□□□□ -0.21
AC062004.1-201ENST00000518706 OSCARQ8IYS5 282 aa13.68□□□□□ -0.22
AC062004.1-201ENST00000518706 REM2Q8IYK8 340 aaPredicted RBP13.67□□□□□ -0.22
AC062004.1-201ENST00000518706 FBLN2P98095 1184 aa13.63□□□□□ -0.23
AC062004.1-201ENST00000518706 SPDYE2BA6NHP3 402 aa13.55□□□□□ -0.24
AC062004.1-201ENST00000518706 SPDYE6P0CI01 402 aa13.55□□□□□ -0.24
AC062004.1-201ENST00000518706 SPDYE2Q495Y8 402 aa13.55□□□□□ -0.24
AC062004.1-201ENST00000518706 PIP4P2Q8N4L2 257 aa13.49□□□□□ -0.25
AC062004.1-201ENST00000518706 PITPNM1O00562 1244 aa13.48□□□□□ -0.25
AC062004.1-201ENST00000518706 FXR2P51116 673 aaKnown RBP eCLIP13.45□□□□□ -0.26
AC062004.1-201ENST00000518706 SP7Q8TDD2 431 aaPredicted RBP13.42□□□□□ -0.26
AC062004.1-201ENST00000518706 SPDYE1Q8NFV5 336 aaPredicted RBP13.35□□□□□ -0.27
AC062004.1-201ENST00000518706 HAX1O00165 279 aa13.34□□□□□ -0.27
AC062004.1-201ENST00000518706 ZNF692Q9BU19 519 aaPredicted RBP13.34□□□□□ -0.27
AC062004.1-201ENST00000518706 MKRN4PQ13434 485 aaPredicted RBP13.3□□□□□ -0.28
AC062004.1-201ENST00000518706 SSUH2Q9Y2M2 353 aa13.28□□□□□ -0.28
AC062004.1-201ENST00000518706 CLEC11AQ9Y240 323 aa13.25□□□□□ -0.29
AC062004.1-201ENST00000518706 PRKAR2AP13861 404 aaKnown RBP13.17□□□□□ -0.3
AC062004.1-201ENST00000518706 CSRNP3Q8WYN3 585 aa13.11□□□□□ -0.31
AC062004.1-201ENST00000518706 PRR29P0C7W0 189 aa13.08□□□□□ -0.32
AC062004.1-201ENST00000518706 PABPN1Q86U42 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
AC062004.1-201ENST00000518706 C19orf67A6NJJ6 358 aa13.01□□□□□ -0.33
AC062004.1-201ENST00000518706 EVX2Q03828 476 aa13□□□□□ -0.33
AC062004.1-201ENST00000518706 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
AC062004.1-201ENST00000518706 STAG3Q9UJ98 1225 aa12.88□□□□□ -0.35
AC062004.1-201ENST00000518706 CLCN6P51797 869 aa12.85□□□□□ -0.35
AC062004.1-201ENST00000518706 EHMT2Q96KQ7 1210 aa12.84□□□□□ -0.35
AC062004.1-201ENST00000518706 GABBR2O75899 941 aa12.82□□□□□ -0.36
AC062004.1-201ENST00000518706 FARP1Q9Y4F1 1045 aaPredicted RBP12.82□□□□□ -0.36
AC062004.1-201ENST00000518706 CD44P16070 742 aaKnown RBP12.75□□□□□ -0.37
AC062004.1-201ENST00000518706 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
AC062004.1-201ENST00000518706 CREBZFQ9NS37 354 aa12.63□□□□□ -0.39
AC062004.1-201ENST00000518706 LHX8Q68G74 356 aa12.59□□□□□ -0.39
AC062004.1-201ENST00000518706 ZNF579Q8NAF0 562 aaKnown RBP12.58□□□□□ -0.4
AC062004.1-201ENST00000518706 PAK3O75914 559 aaPredicted RBP12.57□□□□□ -0.4
AC062004.1-201ENST00000518706 NPM1P06748 294 aaKnown RBP eCLIP12.57□□□□□ -0.4
AC062004.1-201ENST00000518706 ZRANB1Q9UGI0 708 aa12.56□□□□□ -0.4
AC062004.1-201ENST00000518706 DCBLD2Q96PD2 775 aa12.55□□□□□ -0.4
AC062004.1-201ENST00000518706 POTEIP0CG38 1075 aa12.46□□□□□ -0.41
AC062004.1-201ENST00000518706 NISCHQ9Y2I1 1504 aa12.46□□□□□ -0.42
AC062004.1-201ENST00000518706 PROM2Q8N271 834 aa12.39□□□□□ -0.43
AC062004.1-201ENST00000518706 MNX1P50219 401 aaPredicted RBP12.37□□□□□ -0.43
AC062004.1-201ENST00000518706 PLEKHG5O94827 1062 aa12.35□□□□□ -0.43
AC062004.1-201ENST00000518706 GALR2O43603 387 aaPredicted RBP12.33□□□□□ -0.44
AC062004.1-201ENST00000518706 PHF12Q96QT6 1004 aa12.29□□□□□ -0.44
AC062004.1-201ENST00000518706 MIER1Q8N108 512 aa12.2□□□□□ -0.46
AC062004.1-201ENST00000518706 TSPYL2Q9H2G4 693 aaPredicted RBP12.18□□□□□ -0.46
AC062004.1-201ENST00000518706 ASTLQ6HA08 431 aaPredicted RBP12.16□□□□□ -0.46
AC062004.1-201ENST00000518706 SLC39A7Q92504 469 aa12.15□□□□□ -0.46
AC062004.1-201ENST00000518706 MS4A3Q96HJ5 214 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms