RNA–Protein interactions for RNA: ENST00000517410.1

AC087439.2-202, humanhuman

TSL 3

Gene AC087439.2, Length 321 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087439.2-202ENST00000517410 AEBP2Q6ZN18 517 aaPredicted RBP36■■■■□ 3.35
AC087439.2-202ENST00000517410 CHIC1Q5VXU3 224 aa34.26■■■■□ 3.08
AC087439.2-202ENST00000517410 SENP3Q9H4L4 574 aaPredicted RBP30.74■■■□□ 2.51
AC087439.2-202ENST00000517410 PHF23Q9BUL5 403 aaPredicted RBP30.31■■■□□ 2.44
AC087439.2-202ENST00000517410 FOXD1Q16676 465 aa28.62■■■□□ 2.17
AC087439.2-202ENST00000517410 PLPPR3Q6T4P5 718 aa27.39■■□□□ 1.98
AC087439.2-202ENST00000517410 MSH5O43196 834 aa26.81■■□□□ 1.88
AC087439.2-202ENST00000517410 PIAS4Q8N2W9 510 aaPredicted RBP26.76■■□□□ 1.87
AC087439.2-202ENST00000517410 PPP6R1Q9UPN7 881 aa26.76■■□□□ 1.87
AC087439.2-202ENST00000517410 ADRA2BP18089 450 aa26.68■■□□□ 1.86
AC087439.2-202ENST00000517410 POTEDQ86YR6 584 aa26.06■■□□□ 1.76
AC087439.2-202ENST00000517410 MAPK8IP2Q13387 824 aaPredicted RBP24.47■■□□□ 1.51
AC087439.2-202ENST00000517410 SCAF1Q9H7N4 1312 aaKnown RBP24.45■■□□□ 1.5
AC087439.2-202ENST00000517410 DMRT2Q9Y5R5 561 aa24.38■■□□□ 1.49
AC087439.2-202ENST00000517410 PPP4R3CPQ6ZMV5 832 aa23.99■■□□□ 1.43
AC087439.2-202ENST00000517410 CNKSR2Q8WXI2 1034 aa23.55■■□□□ 1.36
AC087439.2-202ENST00000517410 HOXD11P31277 338 aaPredicted RBP23.51■■□□□ 1.35
AC087439.2-202ENST00000517410 RNF216Q9NWF9 866 aaPredicted RBP23.34■■□□□ 1.33
AC087439.2-202ENST00000517410 DCAF8L1A6NGE4 600 aa23.33■■□□□ 1.33
AC087439.2-202ENST00000517410 NCBP3Q53F19 620 aaKnown RBP23.11■■□□□ 1.29
AC087439.2-202ENST00000517410 CACNB1Q02641 598 aaPredicted RBP22.94■■□□□ 1.26
AC087439.2-202ENST00000517410 RNF39Q9H2S5 420 aa22.86■■□□□ 1.25
AC087439.2-202ENST00000517410 NPM3O75607 178 aaKnown RBP22.75■■□□□ 1.23
AC087439.2-202ENST00000517410 DNAJC5BQ9UF47 199 aa22.72■■□□□ 1.23
AC087439.2-202ENST00000517410 C1QBPQ07021 282 aaKnown RBP22.54■■□□□ 1.2
AC087439.2-202ENST00000517410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.36■■□□□ 1.17
AC087439.2-202ENST00000517410 KCNA4P22459 653 aa22.35■■□□□ 1.17
AC087439.2-202ENST00000517410 U3KPZ7 1027 aaPredicted RBP21.91■■□□□ 1.1
AC087439.2-202ENST00000517410 SLC4A2P04920 1241 aa21.72■■□□□ 1.07
AC087439.2-202ENST00000517410 SPINK5Q9NQ38 1064 aaPredicted RBP21.56■■□□□ 1.04
AC087439.2-202ENST00000517410 CAPN15O75808 1086 aa21.53■■□□□ 1.04
AC087439.2-202ENST00000517410 DSG3P32926 999 aa21.41■■□□□ 1.02
AC087439.2-202ENST00000517410 APLP2Q06481 763 aa21.35■■□□□ 1.01
AC087439.2-202ENST00000517410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.33■■□□□ 1.01
AC087439.2-202ENST00000517410 HNRNPUL2Q1KMD3 747 aaKnown RBP21.33■■□□□ 1.01
AC087439.2-202ENST00000517410 SAMD1Q6SPF0 538 aaPredicted RBP21.2■□□□□ 0.98
AC087439.2-202ENST00000517410 ZNF219Q9P2Y4 722 aaPredicted RBP21.2■□□□□ 0.98
AC087439.2-202ENST00000517410 TRHP20396 242 aaPredicted RBP21.18■□□□□ 0.98
AC087439.2-202ENST00000517410 SLC4A1APQ9BWU0 796 aaKnown RBP21.11■□□□□ 0.97
AC087439.2-202ENST00000517410 MYCNP04198 464 aaPredicted RBP21.08■□□□□ 0.97
AC087439.2-202ENST00000517410 ABCB7O75027 752 aa21.03■□□□□ 0.96
AC087439.2-202ENST00000517410 FOXD4L1Q9NU39 408 aa20.87■□□□□ 0.93
AC087439.2-202ENST00000517410 POLA2Q14181 598 aa20.62■□□□□ 0.89
AC087439.2-202ENST00000517410 ZBTB22O15209 634 aa20.55■□□□□ 0.88
AC087439.2-202ENST00000517410 ATF5Q9Y2D1 282 aaPredicted RBP20.54■□□□□ 0.88
AC087439.2-202ENST00000517410 RBM42Q9BTD8 480 aaKnown RBP20.46■□□□□ 0.87
AC087439.2-202ENST00000517410 POTEHQ6S545 545 aa20.44■□□□□ 0.86
AC087439.2-202ENST00000517410 ZBTB12Q9Y330 459 aaPredicted RBP20.28■□□□□ 0.84
AC087439.2-202ENST00000517410 ATXN8OSP0DMR3 200 aa20.24■□□□□ 0.83
AC087439.2-202ENST00000517410 OSCARQ8IYS5 282 aa19.99■□□□□ 0.79
AC087439.2-202ENST00000517410 AKT1S1Q96B36 256 aa19.99■□□□□ 0.79
AC087439.2-202ENST00000517410 CHRDL2Q6WN34 429 aa19.97■□□□□ 0.79
AC087439.2-202ENST00000517410 FBLN2P98095 1184 aa19.77■□□□□ 0.76
AC087439.2-202ENST00000517410 REM2Q8IYK8 340 aaPredicted RBP19.77■□□□□ 0.76
AC087439.2-202ENST00000517410 SPDYE2BA6NHP3 402 aa19.64■□□□□ 0.73
AC087439.2-202ENST00000517410 SPDYE6P0CI01 402 aa19.64■□□□□ 0.73
AC087439.2-202ENST00000517410 SPDYE2Q495Y8 402 aa19.64■□□□□ 0.73
AC087439.2-202ENST00000517410 MKRN4PQ13434 485 aaPredicted RBP19.62■□□□□ 0.73
AC087439.2-202ENST00000517410 CSRNP3Q8WYN3 585 aa19.62■□□□□ 0.73
AC087439.2-202ENST00000517410 PITPNM1O00562 1244 aa19.58■□□□□ 0.72
AC087439.2-202ENST00000517410 PIP4P2Q8N4L2 257 aa19.5■□□□□ 0.71
AC087439.2-202ENST00000517410 FXR2P51116 673 aaKnown RBP eCLIP19.4■□□□□ 0.7
AC087439.2-202ENST00000517410 SSUH2Q9Y2M2 353 aa19.39■□□□□ 0.69
AC087439.2-202ENST00000517410 EHMT2Q96KQ7 1210 aa19.38■□□□□ 0.69
AC087439.2-202ENST00000517410 ZNF692Q9BU19 519 aaPredicted RBP19.37■□□□□ 0.69
AC087439.2-202ENST00000517410 SPDYE1Q8NFV5 336 aaPredicted RBP19.28■□□□□ 0.68
AC087439.2-202ENST00000517410 CLEC11AQ9Y240 323 aa19.2■□□□□ 0.66
AC087439.2-202ENST00000517410 SP7Q8TDD2 431 aaPredicted RBP19.19■□□□□ 0.66
AC087439.2-202ENST00000517410 HAX1O00165 279 aa19.11■□□□□ 0.65
AC087439.2-202ENST00000517410 PABPN1Q86U42 306 aaKnown RBP eCLIP19.09■□□□□ 0.65
AC087439.2-202ENST00000517410 PRKAR2AP13861 404 aaKnown RBP19.06■□□□□ 0.64
AC087439.2-202ENST00000517410 PRR29P0C7W0 189 aa18.9■□□□□ 0.62
AC087439.2-202ENST00000517410 EVX2Q03828 476 aa18.87■□□□□ 0.61
AC087439.2-202ENST00000517410 CHADLQ6NUI6 762 aa18.83■□□□□ 0.6
AC087439.2-202ENST00000517410 C19orf67A6NJJ6 358 aa18.78■□□□□ 0.6
AC087439.2-202ENST00000517410 SPDYE4A6NLX3 237 aa18.71■□□□□ 0.59
AC087439.2-202ENST00000517410 STAG3Q9UJ98 1225 aa18.61■□□□□ 0.57
AC087439.2-202ENST00000517410 FARP1Q9Y4F1 1045 aaPredicted RBP18.58■□□□□ 0.56
AC087439.2-202ENST00000517410 GABBR2O75899 941 aa18.47■□□□□ 0.55
AC087439.2-202ENST00000517410 CD44P16070 742 aaKnown RBP18.46■□□□□ 0.55
AC087439.2-202ENST00000517410 CREBZFQ9NS37 354 aa18.46■□□□□ 0.55
AC087439.2-202ENST00000517410 PROM2Q8N271 834 aa18.31■□□□□ 0.52
AC087439.2-202ENST00000517410 CLCN6P51797 869 aa18.24■□□□□ 0.51
AC087439.2-202ENST00000517410 ZNF579Q8NAF0 562 aaKnown RBP18.21■□□□□ 0.51
AC087439.2-202ENST00000517410 ZRANB1Q9UGI0 708 aa18.2■□□□□ 0.5
AC087439.2-202ENST00000517410 MNX1P50219 401 aaPredicted RBP18.16■□□□□ 0.5
AC087439.2-202ENST00000517410 NPM1P06748 294 aaKnown RBP eCLIP18.13■□□□□ 0.49
AC087439.2-202ENST00000517410 PAK3O75914 559 aaPredicted RBP18.08■□□□□ 0.48
AC087439.2-202ENST00000517410 POTEIP0CG38 1075 aa18.08■□□□□ 0.48
AC087439.2-202ENST00000517410 DCBLD2Q96PD2 775 aa17.99■□□□□ 0.47
AC087439.2-202ENST00000517410 LHX8Q68G74 356 aa17.98■□□□□ 0.47
AC087439.2-202ENST00000517410 GALR2O43603 387 aaPredicted RBP17.95■□□□□ 0.46
AC087439.2-202ENST00000517410 PHF12Q96QT6 1004 aa17.95■□□□□ 0.46
AC087439.2-202ENST00000517410 PLEKHG5O94827 1062 aa17.84■□□□□ 0.45
AC087439.2-202ENST00000517410 MIER1Q8N108 512 aa17.82■□□□□ 0.44
AC087439.2-202ENST00000517410 FKBP8Q14318 412 aa17.8■□□□□ 0.44
AC087439.2-202ENST00000517410 TSPYL2Q9H2G4 693 aaPredicted RBP17.77■□□□□ 0.44
AC087439.2-202ENST00000517410 MS4A3Q96HJ5 214 aa17.72■□□□□ 0.43
AC087439.2-202ENST00000517410 CCDC61Q9Y6R9 512 aa17.72■□□□□ 0.43
AC087439.2-202ENST00000517410 PLCD3Q8N3E9 789 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms