RNA–Protein interactions for RNA: ENST00000517349.1

SMIM18-201, Transcript of small integral membrane protein 18, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM18, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18-201ENST00000517349 AEBP2Q6ZN18 517 aaPredicted RBP21.64■■□□□ 1.05
SMIM18-201ENST00000517349 CHIC1Q5VXU3 224 aa20.94■□□□□ 0.94
SMIM18-201ENST00000517349 SENP3Q9H4L4 574 aaPredicted RBP18.53■□□□□ 0.56
SMIM18-201ENST00000517349 PHF23Q9BUL5 403 aaPredicted RBP18.33■□□□□ 0.52
SMIM18-201ENST00000517349 FOXD1Q16676 465 aa17.32■□□□□ 0.36
SMIM18-201ENST00000517349 PLPPR3Q6T4P5 718 aa16.97■□□□□ 0.31
SMIM18-201ENST00000517349 POTEDQ86YR6 584 aa16.63■□□□□ 0.25
SMIM18-201ENST00000517349 MSH5O43196 834 aa16.35■□□□□ 0.21
SMIM18-201ENST00000517349 PPP6R1Q9UPN7 881 aa16.24■□□□□ 0.19
SMIM18-201ENST00000517349 ADRA2BP18089 450 aa16.23■□□□□ 0.19
SMIM18-201ENST00000517349 PIAS4Q8N2W9 510 aaPredicted RBP16.12■□□□□ 0.17
SMIM18-201ENST00000517349 SCAF1Q9H7N4 1312 aaKnown RBP15.01□□□□□ -0.01
SMIM18-201ENST00000517349 PPP4R3CPQ6ZMV5 832 aa14.89□□□□□ -0.03
SMIM18-201ENST00000517349 MAPK8IP2Q13387 824 aaPredicted RBP14.77□□□□□ -0.05
SMIM18-201ENST00000517349 DMRT2Q9Y5R5 561 aa14.66□□□□□ -0.06
SMIM18-201ENST00000517349 CNKSR2Q8WXI2 1034 aa14.55□□□□□ -0.08
SMIM18-201ENST00000517349 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
SMIM18-201ENST00000517349 RNF216Q9NWF9 866 aaPredicted RBP14.32□□□□□ -0.12
SMIM18-201ENST00000517349 CACNB1Q02641 598 aaPredicted RBP14.3□□□□□ -0.12
SMIM18-201ENST00000517349 HOXD11P31277 338 aaPredicted RBP14.28□□□□□ -0.12
SMIM18-201ENST00000517349 KCNA4P22459 653 aa14.27□□□□□ -0.13
SMIM18-201ENST00000517349 NPM3O75607 178 aaKnown RBP14.2□□□□□ -0.14
SMIM18-201ENST00000517349 DCAF8L1A6NGE4 600 aa14.12□□□□□ -0.15
SMIM18-201ENST00000517349 RNF39Q9H2S5 420 aa13.91□□□□□ -0.18
SMIM18-201ENST00000517349 DNAJC5BQ9UF47 199 aa13.89□□□□□ -0.19
SMIM18-201ENST00000517349 C1QBPQ07021 282 aaKnown RBP13.68□□□□□ -0.22
SMIM18-201ENST00000517349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.65□□□□□ -0.22
SMIM18-201ENST00000517349 SLC4A1APQ9BWU0 796 aaKnown RBP13.61□□□□□ -0.23
SMIM18-201ENST00000517349 SLC4A2P04920 1241 aa13.44□□□□□ -0.26
SMIM18-201ENST00000517349 U3KPZ7 1027 aaPredicted RBP13.33□□□□□ -0.28
SMIM18-201ENST00000517349 FOXD4L1Q9NU39 408 aa13.25□□□□□ -0.29
SMIM18-201ENST00000517349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.24□□□□□ -0.29
SMIM18-201ENST00000517349 HNRNPUL2Q1KMD3 747 aaKnown RBP13.24□□□□□ -0.29
SMIM18-201ENST00000517349 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
SMIM18-201ENST00000517349 APLP2Q06481 763 aa13.18□□□□□ -0.3
SMIM18-201ENST00000517349 SAMD1Q6SPF0 538 aaPredicted RBP13.15□□□□□ -0.3
SMIM18-201ENST00000517349 ZBTB22O15209 634 aa13.07□□□□□ -0.32
SMIM18-201ENST00000517349 CAPN15O75808 1086 aa13.03□□□□□ -0.32
SMIM18-201ENST00000517349 SPINK5Q9NQ38 1064 aaPredicted RBP13□□□□□ -0.33
SMIM18-201ENST00000517349 POTEHQ6S545 545 aa12.96□□□□□ -0.33
SMIM18-201ENST00000517349 ZNF219Q9P2Y4 722 aaPredicted RBP12.95□□□□□ -0.34
SMIM18-201ENST00000517349 EHMT2Q96KQ7 1210 aa12.94□□□□□ -0.34
SMIM18-201ENST00000517349 TRHP20396 242 aaPredicted RBP12.91□□□□□ -0.34
SMIM18-201ENST00000517349 DSG3P32926 999 aa12.9□□□□□ -0.34
SMIM18-201ENST00000517349 CSRNP3Q8WYN3 585 aa12.9□□□□□ -0.34
SMIM18-201ENST00000517349 ATXN8OSP0DMR3 200 aa12.86□□□□□ -0.35
SMIM18-201ENST00000517349 ATF5Q9Y2D1 282 aaPredicted RBP12.73□□□□□ -0.37
SMIM18-201ENST00000517349 ABCB7O75027 752 aa12.71□□□□□ -0.37
SMIM18-201ENST00000517349 POLA2Q14181 598 aa12.66□□□□□ -0.38
SMIM18-201ENST00000517349 ZBTB12Q9Y330 459 aaPredicted RBP12.52□□□□□ -0.41
SMIM18-201ENST00000517349 FBLN2P98095 1184 aa12.37□□□□□ -0.43
SMIM18-201ENST00000517349 RBM42Q9BTD8 480 aaKnown RBP12.33□□□□□ -0.44
SMIM18-201ENST00000517349 CHRDL2Q6WN34 429 aa12.22□□□□□ -0.45
SMIM18-201ENST00000517349 MKRN4PQ13434 485 aaPredicted RBP12.19□□□□□ -0.46
SMIM18-201ENST00000517349 OSCARQ8IYS5 282 aa12.18□□□□□ -0.46
SMIM18-201ENST00000517349 SPDYE2BA6NHP3 402 aa12.12□□□□□ -0.47
SMIM18-201ENST00000517349 SPDYE6P0CI01 402 aa12.12□□□□□ -0.47
SMIM18-201ENST00000517349 SPDYE2Q495Y8 402 aa12.12□□□□□ -0.47
SMIM18-201ENST00000517349 AKT1S1Q96B36 256 aa12.1□□□□□ -0.47
SMIM18-201ENST00000517349 ZNF692Q9BU19 519 aaPredicted RBP12.04□□□□□ -0.48
SMIM18-201ENST00000517349 SP7Q8TDD2 431 aaPredicted RBP11.96□□□□□ -0.49
SMIM18-201ENST00000517349 SSUH2Q9Y2M2 353 aa11.96□□□□□ -0.49
SMIM18-201ENST00000517349 REM2Q8IYK8 340 aaPredicted RBP11.94□□□□□ -0.5
SMIM18-201ENST00000517349 SPDYE4A6NLX3 237 aa11.9□□□□□ -0.5
SMIM18-201ENST00000517349 PIP4P2Q8N4L2 257 aa11.85□□□□□ -0.51
SMIM18-201ENST00000517349 PABPN1Q86U42 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
SMIM18-201ENST00000517349 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
SMIM18-201ENST00000517349 PITPNM1O00562 1244 aa11.77□□□□□ -0.53
SMIM18-201ENST00000517349 HAX1O00165 279 aa11.76□□□□□ -0.53
SMIM18-201ENST00000517349 CLEC11AQ9Y240 323 aa11.75□□□□□ -0.53
SMIM18-201ENST00000517349 FKBP8Q14318 412 aa11.7□□□□□ -0.54
SMIM18-201ENST00000517349 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
SMIM18-201ENST00000517349 FXR2P51116 673 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMIM18-201ENST00000517349 PRR29P0C7W0 189 aa11.65□□□□□ -0.54
SMIM18-201ENST00000517349 PROM2Q8N271 834 aa11.64□□□□□ -0.55
SMIM18-201ENST00000517349 EVX2Q03828 476 aa11.56□□□□□ -0.56
SMIM18-201ENST00000517349 PRKAR2AP13861 404 aaKnown RBP11.51□□□□□ -0.57
SMIM18-201ENST00000517349 FBXO3Q9UK99 471 aa11.44□□□□□ -0.58
SMIM18-201ENST00000517349 CHADLQ6NUI6 762 aa11.42□□□□□ -0.58
SMIM18-201ENST00000517349 PLEKHG5O94827 1062 aa11.38□□□□□ -0.59
SMIM18-201ENST00000517349 CREBZFQ9NS37 354 aa11.38□□□□□ -0.59
SMIM18-201ENST00000517349 MIER1Q8N108 512 aa11.35□□□□□ -0.59
SMIM18-201ENST00000517349 FARP1Q9Y4F1 1045 aaPredicted RBP11.35□□□□□ -0.59
SMIM18-201ENST00000517349 C19orf67A6NJJ6 358 aa11.34□□□□□ -0.59
SMIM18-201ENST00000517349 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
SMIM18-201ENST00000517349 NPM1P06748 294 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMIM18-201ENST00000517349 GABBR2O75899 941 aa11.28□□□□□ -0.6
SMIM18-201ENST00000517349 ZBTB47Q9UFB7 747 aaPredicted RBP11.25□□□□□ -0.61
SMIM18-201ENST00000517349 LHX8Q68G74 356 aa11.22□□□□□ -0.61
SMIM18-201ENST00000517349 MNX1P50219 401 aaPredicted RBP11.21□□□□□ -0.61
SMIM18-201ENST00000517349 VASPP50552 380 aaPredicted RBP11.2□□□□□ -0.62
SMIM18-201ENST00000517349 CD44P16070 742 aaKnown RBP11.17□□□□□ -0.62
SMIM18-201ENST00000517349 PAK3O75914 559 aaPredicted RBP11.16□□□□□ -0.62
SMIM18-201ENST00000517349 KLHL34Q8N239 644 aa11.11□□□□□ -0.63
SMIM18-201ENST00000517349 ZRANB1Q9UGI0 708 aa11.08□□□□□ -0.64
SMIM18-201ENST00000517349 CLCN6P51797 869 aa11.07□□□□□ -0.64
SMIM18-201ENST00000517349 POTEIP0CG38 1075 aa11.03□□□□□ -0.64
SMIM18-201ENST00000517349 ZNF579Q8NAF0 562 aaKnown RBP11.02□□□□□ -0.65
SMIM18-201ENST00000517349 TSPYL2Q9H2G4 693 aaPredicted RBP11.02□□□□□ -0.65
SMIM18-201ENST00000517349 NUBP1P53384 320 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms