RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 AEBP2Q6ZN18 517 aaPredicted RBP23.09■■□□□ 1.29
RNU6-1028P-201ENST00000517164 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
RNU6-1028P-201ENST00000517164 PHF23Q9BUL5 403 aaPredicted RBP20.07■□□□□ 0.8
RNU6-1028P-201ENST00000517164 SENP3Q9H4L4 574 aaPredicted RBP19.49■□□□□ 0.71
RNU6-1028P-201ENST00000517164 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
RNU6-1028P-201ENST00000517164 FOXD1Q16676 465 aa18.1■□□□□ 0.49
RNU6-1028P-201ENST00000517164 PPP6R1Q9UPN7 881 aa17.63■□□□□ 0.41
RNU6-1028P-201ENST00000517164 ADRA2BP18089 450 aa17.62■□□□□ 0.41
RNU6-1028P-201ENST00000517164 PIAS4Q8N2W9 510 aaPredicted RBP17.13■□□□□ 0.33
RNU6-1028P-201ENST00000517164 MSH5O43196 834 aa16.55■□□□□ 0.24
RNU6-1028P-201ENST00000517164 PPP4R3CPQ6ZMV5 832 aa16.41■□□□□ 0.22
RNU6-1028P-201ENST00000517164 KCNA4P22459 653 aa16.33■□□□□ 0.2
RNU6-1028P-201ENST00000517164 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
RNU6-1028P-201ENST00000517164 NCBP3Q53F19 620 aaKnown RBP16.01■□□□□ 0.15
RNU6-1028P-201ENST00000517164 MAPK8IP2Q13387 824 aaPredicted RBP15.93■□□□□ 0.14
RNU6-1028P-201ENST00000517164 CNKSR2Q8WXI2 1034 aa15.87■□□□□ 0.13
RNU6-1028P-201ENST00000517164 NPM3O75607 178 aaKnown RBP15.83■□□□□ 0.12
RNU6-1028P-201ENST00000517164 DMRT2Q9Y5R5 561 aa15.61■□□□□ 0.09
RNU6-1028P-201ENST00000517164 SLC4A1APQ9BWU0 796 aaKnown RBP15.58■□□□□ 0.08
RNU6-1028P-201ENST00000517164 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
RNU6-1028P-201ENST00000517164 EHMT2Q96KQ7 1210 aa15.46■□□□□ 0.07
RNU6-1028P-201ENST00000517164 HOXD11P31277 338 aaPredicted RBP15.38■□□□□ 0.05
RNU6-1028P-201ENST00000517164 DNAJC5BQ9UF47 199 aa15.28■□□□□ 0.04
RNU6-1028P-201ENST00000517164 CSRNP3Q8WYN3 585 aa15.14■□□□□ 0.01
RNU6-1028P-201ENST00000517164 ZBTB22O15209 634 aa15.06■□□□□ 0
RNU6-1028P-201ENST00000517164 DCAF8L1A6NGE4 600 aa14.95□□□□□ -0.02
RNU6-1028P-201ENST00000517164 FOXD4L1Q9NU39 408 aa14.94□□□□□ -0.02
RNU6-1028P-201ENST00000517164 SLC4A2P04920 1241 aa14.9□□□□□ -0.02
RNU6-1028P-201ENST00000517164 POTEDQ86YR6 584 aa14.68□□□□□ -0.06
RNU6-1028P-201ENST00000517164 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.67□□□□□ -0.06
RNU6-1028P-201ENST00000517164 MYCNP04198 464 aaPredicted RBP14.59□□□□□ -0.07
RNU6-1028P-201ENST00000517164 U3KPZ7 1027 aaPredicted RBP14.48□□□□□ -0.09
RNU6-1028P-201ENST00000517164 ATXN8OSP0DMR3 200 aa14.36□□□□□ -0.11
RNU6-1028P-201ENST00000517164 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.31□□□□□ -0.12
RNU6-1028P-201ENST00000517164 HNRNPUL2Q1KMD3 747 aaKnown RBP14.31□□□□□ -0.12
RNU6-1028P-201ENST00000517164 SAMD1Q6SPF0 538 aaPredicted RBP14.29□□□□□ -0.12
RNU6-1028P-201ENST00000517164 ATF5Q9Y2D1 282 aaPredicted RBP14.24□□□□□ -0.13
RNU6-1028P-201ENST00000517164 RNF39Q9H2S5 420 aa14.23□□□□□ -0.13
RNU6-1028P-201ENST00000517164 APLP2Q06481 763 aa14.09□□□□□ -0.15
RNU6-1028P-201ENST00000517164 C1QBPQ07021 282 aaKnown RBP14.05□□□□□ -0.16
RNU6-1028P-201ENST00000517164 SPINK5Q9NQ38 1064 aaPredicted RBP14.02□□□□□ -0.17
RNU6-1028P-201ENST00000517164 ZNF219Q9P2Y4 722 aaPredicted RBP13.95□□□□□ -0.18
RNU6-1028P-201ENST00000517164 CAPN15O75808 1086 aa13.93□□□□□ -0.18
RNU6-1028P-201ENST00000517164 TRHP20396 242 aaPredicted RBP13.92□□□□□ -0.18
RNU6-1028P-201ENST00000517164 POLA2Q14181 598 aa13.74□□□□□ -0.21
RNU6-1028P-201ENST00000517164 ABCB7O75027 752 aa13.71□□□□□ -0.21
RNU6-1028P-201ENST00000517164 CACNB1Q02641 598 aaPredicted RBP13.68□□□□□ -0.22
RNU6-1028P-201ENST00000517164 FKBP8Q14318 412 aa13.68□□□□□ -0.22
RNU6-1028P-201ENST00000517164 DSG3P32926 999 aa13.63□□□□□ -0.23
RNU6-1028P-201ENST00000517164 MKRN4PQ13434 485 aaPredicted RBP13.62□□□□□ -0.23
RNU6-1028P-201ENST00000517164 FBLN2P98095 1184 aa13.56□□□□□ -0.24
RNU6-1028P-201ENST00000517164 ZBTB12Q9Y330 459 aaPredicted RBP13.49□□□□□ -0.25
RNU6-1028P-201ENST00000517164 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
RNU6-1028P-201ENST00000517164 OSCARQ8IYS5 282 aa13.29□□□□□ -0.28
RNU6-1028P-201ENST00000517164 PROM2Q8N271 834 aa13.23□□□□□ -0.29
RNU6-1028P-201ENST00000517164 SPDYE2BA6NHP3 402 aa13.17□□□□□ -0.3
RNU6-1028P-201ENST00000517164 SPDYE6P0CI01 402 aa13.17□□□□□ -0.3
RNU6-1028P-201ENST00000517164 SPDYE2Q495Y8 402 aa13.17□□□□□ -0.3
RNU6-1028P-201ENST00000517164 ZNF692Q9BU19 519 aaPredicted RBP13.17□□□□□ -0.3
RNU6-1028P-201ENST00000517164 SSUH2Q9Y2M2 353 aa13.11□□□□□ -0.31
RNU6-1028P-201ENST00000517164 FBXO3Q9UK99 471 aa13.06□□□□□ -0.32
RNU6-1028P-201ENST00000517164 PABPN1Q86U42 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
RNU6-1028P-201ENST00000517164 RBM42Q9BTD8 480 aaKnown RBP12.94□□□□□ -0.34
RNU6-1028P-201ENST00000517164 VASPP50552 380 aaPredicted RBP12.92□□□□□ -0.34
RNU6-1028P-201ENST00000517164 RTN4Q9NQC3 1192 aaKnown RBP12.88□□□□□ -0.35
RNU6-1028P-201ENST00000517164 AMER1Q5JTC6 1135 aaPredicted RBP12.86□□□□□ -0.35
RNU6-1028P-201ENST00000517164 AKT1S1Q96B36 256 aa12.85□□□□□ -0.35
RNU6-1028P-201ENST00000517164 STAG3Q9UJ98 1225 aa12.82□□□□□ -0.36
RNU6-1028P-201ENST00000517164 IFNLR1Q8IU57 520 aaPredicted RBP12.79□□□□□ -0.36
RNU6-1028P-201ENST00000517164 REM2Q8IYK8 340 aaPredicted RBP12.75□□□□□ -0.37
RNU6-1028P-201ENST00000517164 SPDYE1Q8NFV5 336 aaPredicted RBP12.72□□□□□ -0.37
RNU6-1028P-201ENST00000517164 PLCD3Q8N3E9 789 aa12.69□□□□□ -0.38
RNU6-1028P-201ENST00000517164 MIER1Q8N108 512 aa12.68□□□□□ -0.38
RNU6-1028P-201ENST00000517164 CLEC11AQ9Y240 323 aa12.68□□□□□ -0.38
RNU6-1028P-201ENST00000517164 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
RNU6-1028P-201ENST00000517164 PITPNM1O00562 1244 aa12.62□□□□□ -0.39
RNU6-1028P-201ENST00000517164 PRR29P0C7W0 189 aa12.58□□□□□ -0.4
RNU6-1028P-201ENST00000517164 PLEKHG5O94827 1062 aa12.56□□□□□ -0.4
RNU6-1028P-201ENST00000517164 SPOCK2Q92563 424 aa12.55□□□□□ -0.4
RNU6-1028P-201ENST00000517164 CREBZFQ9NS37 354 aa12.5□□□□□ -0.41
RNU6-1028P-201ENST00000517164 ZBTB47Q9UFB7 747 aaPredicted RBP12.5□□□□□ -0.41
RNU6-1028P-201ENST00000517164 PKD2Q13563 968 aa12.45□□□□□ -0.42
RNU6-1028P-201ENST00000517164 MNX1P50219 401 aaPredicted RBP12.41□□□□□ -0.42
RNU6-1028P-201ENST00000517164 CHADLQ6NUI6 762 aa12.38□□□□□ -0.43
RNU6-1028P-201ENST00000517164 NUBP1P53384 320 aa12.35□□□□□ -0.43
RNU6-1028P-201ENST00000517164 CHRDL2Q6WN34 429 aa12.34□□□□□ -0.43
RNU6-1028P-201ENST00000517164 CIZ1Q9ULV3 898 aaPredicted RBP12.34□□□□□ -0.43
RNU6-1028P-201ENST00000517164 ECM2O94769 699 aaPredicted RBP12.31□□□□□ -0.44
RNU6-1028P-201ENST00000517164 FXR2P51116 673 aaKnown RBP eCLIP12.31□□□□□ -0.44
RNU6-1028P-201ENST00000517164 PRKAR2AP13861 404 aaKnown RBP12.29□□□□□ -0.44
RNU6-1028P-201ENST00000517164 NPM1P06748 294 aaKnown RBP eCLIP12.26□□□□□ -0.45
RNU6-1028P-201ENST00000517164 RASEFQ8IZ41 740 aa12.26□□□□□ -0.45
RNU6-1028P-201ENST00000517164 PIP4P2Q8N4L2 257 aa12.25□□□□□ -0.45
RNU6-1028P-201ENST00000517164 FARP1Q9Y4F1 1045 aaPredicted RBP12.25□□□□□ -0.45
RNU6-1028P-201ENST00000517164 DCAF8L2P0C7V8 631 aa12.24□□□□□ -0.45
RNU6-1028P-201ENST00000517164 GSE1Q14687 1217 aa12.24□□□□□ -0.45
RNU6-1028P-201ENST00000517164 DCAF8Q5TAQ9 597 aa12.24□□□□□ -0.45
RNU6-1028P-201ENST00000517164 FAM212AQ96EL1 285 aa12.22□□□□□ -0.45
RNU6-1028P-201ENST00000517164 RGL2O15211 777 aa12.2□□□□□ -0.46
RNU6-1028P-201ENST00000517164 TRIM41Q8WV44 630 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms