RNA–Protein interactions for RNA: ENST00000517126.1

RNU6-1220P-201, Transcript of RNA, U6 small nuclear 1220, pseudogene, humanhuman

BASIC

Gene RNU6-1220P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1220P-201ENST00000517126 AEBP2Q6ZN18 517 aaPredicted RBP17.91■□□□□ 0.46
RNU6-1220P-201ENST00000517126 CHIC1Q5VXU3 224 aa17.64■□□□□ 0.41
RNU6-1220P-201ENST00000517126 SENP3Q9H4L4 574 aaPredicted RBP15.45■□□□□ 0.06
RNU6-1220P-201ENST00000517126 PHF23Q9BUL5 403 aaPredicted RBP15.37■□□□□ 0.05
RNU6-1220P-201ENST00000517126 PLPPR3Q6T4P5 718 aa14.44□□□□□ -0.1
RNU6-1220P-201ENST00000517126 FOXD1Q16676 465 aa14.18□□□□□ -0.14
RNU6-1220P-201ENST00000517126 ADRA2BP18089 450 aa13.61□□□□□ -0.23
RNU6-1220P-201ENST00000517126 PPP6R1Q9UPN7 881 aa13.55□□□□□ -0.24
RNU6-1220P-201ENST00000517126 PIAS4Q8N2W9 510 aaPredicted RBP13.49□□□□□ -0.25
RNU6-1220P-201ENST00000517126 MSH5O43196 834 aa13.27□□□□□ -0.29
RNU6-1220P-201ENST00000517126 SCAF1Q9H7N4 1312 aaKnown RBP12.72□□□□□ -0.37
RNU6-1220P-201ENST00000517126 PPP4R3CPQ6ZMV5 832 aa12.63□□□□□ -0.39
RNU6-1220P-201ENST00000517126 NCBP3Q53F19 620 aaKnown RBP12.48□□□□□ -0.41
RNU6-1220P-201ENST00000517126 CNKSR2Q8WXI2 1034 aa12.35□□□□□ -0.43
RNU6-1220P-201ENST00000517126 MAPK8IP2Q13387 824 aaPredicted RBP12.3□□□□□ -0.44
RNU6-1220P-201ENST00000517126 KCNA4P22459 653 aa12.27□□□□□ -0.45
RNU6-1220P-201ENST00000517126 DMRT2Q9Y5R5 561 aa12.25□□□□□ -0.45
RNU6-1220P-201ENST00000517126 NPM3O75607 178 aaKnown RBP12.09□□□□□ -0.47
RNU6-1220P-201ENST00000517126 RNF216Q9NWF9 866 aaPredicted RBP12.09□□□□□ -0.47
RNU6-1220P-201ENST00000517126 HOXD11P31277 338 aaPredicted RBP11.98□□□□□ -0.49
RNU6-1220P-201ENST00000517126 POTEDQ86YR6 584 aa11.92□□□□□ -0.5
RNU6-1220P-201ENST00000517126 DCAF8L1A6NGE4 600 aa11.84□□□□□ -0.51
RNU6-1220P-201ENST00000517126 SLC4A1APQ9BWU0 796 aaKnown RBP11.8□□□□□ -0.52
RNU6-1220P-201ENST00000517126 DNAJC5BQ9UF47 199 aa11.76□□□□□ -0.53
RNU6-1220P-201ENST00000517126 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.55□□□□□ -0.56
RNU6-1220P-201ENST00000517126 EHMT2Q96KQ7 1210 aa11.43□□□□□ -0.58
RNU6-1220P-201ENST00000517126 FOXD4L1Q9NU39 408 aa11.41□□□□□ -0.58
RNU6-1220P-201ENST00000517126 SLC4A2P04920 1241 aa11.33□□□□□ -0.6
RNU6-1220P-201ENST00000517126 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.32□□□□□ -0.6
RNU6-1220P-201ENST00000517126 HNRNPUL2Q1KMD3 747 aaKnown RBP11.32□□□□□ -0.6
RNU6-1220P-201ENST00000517126 MYCNP04198 464 aaPredicted RBP11.29□□□□□ -0.6
RNU6-1220P-201ENST00000517126 APLP2Q06481 763 aa11.27□□□□□ -0.61
RNU6-1220P-201ENST00000517126 RNF39Q9H2S5 420 aa11.25□□□□□ -0.61
RNU6-1220P-201ENST00000517126 C1QBPQ07021 282 aaKnown RBP11.22□□□□□ -0.61
RNU6-1220P-201ENST00000517126 SAMD1Q6SPF0 538 aaPredicted RBP11.22□□□□□ -0.61
RNU6-1220P-201ENST00000517126 U3KPZ7 1027 aaPredicted RBP11.21□□□□□ -0.61
RNU6-1220P-201ENST00000517126 ZBTB22O15209 634 aa11.19□□□□□ -0.62
RNU6-1220P-201ENST00000517126 CSRNP3Q8WYN3 585 aa11.19□□□□□ -0.62
RNU6-1220P-201ENST00000517126 ATXN8OSP0DMR3 200 aa11.06□□□□□ -0.64
RNU6-1220P-201ENST00000517126 CACNB1Q02641 598 aaPredicted RBP11.06□□□□□ -0.64
RNU6-1220P-201ENST00000517126 CAPN15O75808 1086 aa10.99□□□□□ -0.65
RNU6-1220P-201ENST00000517126 ZNF219Q9P2Y4 722 aaPredicted RBP10.99□□□□□ -0.65
RNU6-1220P-201ENST00000517126 TRHP20396 242 aaPredicted RBP10.9□□□□□ -0.66
RNU6-1220P-201ENST00000517126 SPINK5Q9NQ38 1064 aaPredicted RBP10.87□□□□□ -0.67
RNU6-1220P-201ENST00000517126 ATF5Q9Y2D1 282 aaPredicted RBP10.76□□□□□ -0.69
RNU6-1220P-201ENST00000517126 DSG3P32926 999 aa10.69□□□□□ -0.7
RNU6-1220P-201ENST00000517126 ZBTB12Q9Y330 459 aaPredicted RBP10.69□□□□□ -0.7
RNU6-1220P-201ENST00000517126 ABCB7O75027 752 aa10.68□□□□□ -0.7
RNU6-1220P-201ENST00000517126 POLA2Q14181 598 aa10.68□□□□□ -0.7
RNU6-1220P-201ENST00000517126 FBLN2P98095 1184 aa10.62□□□□□ -0.71
RNU6-1220P-201ENST00000517126 RBM42Q9BTD8 480 aaKnown RBP10.38□□□□□ -0.75
RNU6-1220P-201ENST00000517126 MKRN4PQ13434 485 aaPredicted RBP10.32□□□□□ -0.76
RNU6-1220P-201ENST00000517126 SPDYE2BA6NHP3 402 aa10.31□□□□□ -0.76
RNU6-1220P-201ENST00000517126 SPDYE6P0CI01 402 aa10.31□□□□□ -0.76
RNU6-1220P-201ENST00000517126 SPDYE2Q495Y8 402 aa10.31□□□□□ -0.76
RNU6-1220P-201ENST00000517126 OSCARQ8IYS5 282 aa10.31□□□□□ -0.76
RNU6-1220P-201ENST00000517126 ZNF692Q9BU19 519 aaPredicted RBP10.26□□□□□ -0.77
RNU6-1220P-201ENST00000517126 SPDYE4A6NLX3 237 aa10.25□□□□□ -0.77
RNU6-1220P-201ENST00000517126 FKBP8Q14318 412 aa10.24□□□□□ -0.77
RNU6-1220P-201ENST00000517126 AKT1S1Q96B36 256 aa10.17□□□□□ -0.78
RNU6-1220P-201ENST00000517126 SSUH2Q9Y2M2 353 aa10.13□□□□□ -0.79
RNU6-1220P-201ENST00000517126 PABPN1Q86U42 306 aaKnown RBP eCLIP10.08□□□□□ -0.8
RNU6-1220P-201ENST00000517126 STAG3Q9UJ98 1225 aa10.05□□□□□ -0.8
RNU6-1220P-201ENST00000517126 SPDYE1Q8NFV5 336 aaPredicted RBP10.03□□□□□ -0.8
RNU6-1220P-201ENST00000517126 FBXO3Q9UK99 471 aa10.03□□□□□ -0.8
RNU6-1220P-201ENST00000517126 REM2Q8IYK8 340 aaPredicted RBP10□□□□□ -0.81
RNU6-1220P-201ENST00000517126 PROM2Q8N271 834 aa9.97□□□□□ -0.81
RNU6-1220P-201ENST00000517126 CLEC11AQ9Y240 323 aa9.96□□□□□ -0.82
RNU6-1220P-201ENST00000517126 PLEKHG5O94827 1062 aa9.91□□□□□ -0.82
RNU6-1220P-201ENST00000517126 PRR29P0C7W0 189 aa9.88□□□□□ -0.83
RNU6-1220P-201ENST00000517126 PITPNM1O00562 1244 aa9.86□□□□□ -0.83
RNU6-1220P-201ENST00000517126 CHRDL2Q6WN34 429 aa9.83□□□□□ -0.84
RNU6-1220P-201ENST00000517126 PLCD3Q8N3E9 789 aa9.8□□□□□ -0.84
RNU6-1220P-201ENST00000517126 ZBTB47Q9UFB7 747 aaPredicted RBP9.78□□□□□ -0.84
RNU6-1220P-201ENST00000517126 MIER1Q8N108 512 aa9.77□□□□□ -0.85
RNU6-1220P-201ENST00000517126 VASPP50552 380 aaPredicted RBP9.75□□□□□ -0.85
RNU6-1220P-201ENST00000517126 KLHL34Q8N239 644 aa9.69□□□□□ -0.86
RNU6-1220P-201ENST00000517126 NPM1P06748 294 aaKnown RBP eCLIP9.67□□□□□ -0.86
RNU6-1220P-201ENST00000517126 PRKAR2AP13861 404 aaKnown RBP9.67□□□□□ -0.86
RNU6-1220P-201ENST00000517126 FXR2P51116 673 aaKnown RBP eCLIP9.67□□□□□ -0.86
RNU6-1220P-201ENST00000517126 PIP4P2Q8N4L2 257 aa9.65□□□□□ -0.86
RNU6-1220P-201ENST00000517126 CREBZFQ9NS37 354 aa9.62□□□□□ -0.87
RNU6-1220P-201ENST00000517126 CHADLQ6NUI6 762 aa9.6□□□□□ -0.87
RNU6-1220P-201ENST00000517126 FARP1Q9Y4F1 1045 aaPredicted RBP9.57□□□□□ -0.88
RNU6-1220P-201ENST00000517126 PAK3O75914 559 aaPredicted RBP9.56□□□□□ -0.88
RNU6-1220P-201ENST00000517126 SPOCK2Q92563 424 aa9.56□□□□□ -0.88
RNU6-1220P-201ENST00000517126 IFNLR1Q8IU57 520 aaPredicted RBP9.53□□□□□ -0.88
RNU6-1220P-201ENST00000517126 POTEHQ6S545 545 aa9.51□□□□□ -0.89
RNU6-1220P-201ENST00000517126 FAM212AQ96EL1 285 aa9.49□□□□□ -0.89
RNU6-1220P-201ENST00000517126 GSE1Q14687 1217 aa9.46□□□□□ -0.9
RNU6-1220P-201ENST00000517126 MNX1P50219 401 aaPredicted RBP9.45□□□□□ -0.9
RNU6-1220P-201ENST00000517126 HAX1O00165 279 aa9.44□□□□□ -0.9
RNU6-1220P-201ENST00000517126 CD44P16070 742 aaKnown RBP9.42□□□□□ -0.9
RNU6-1220P-201ENST00000517126 AMER1Q5JTC6 1135 aaPredicted RBP9.42□□□□□ -0.9
RNU6-1220P-201ENST00000517126 DCAF8Q5TAQ9 597 aa9.42□□□□□ -0.9
RNU6-1220P-201ENST00000517126 CIZ1Q9ULV3 898 aaPredicted RBP9.42□□□□□ -0.9
RNU6-1220P-201ENST00000517126 TRIM41Q8WV44 630 aa9.41□□□□□ -0.9
RNU6-1220P-201ENST00000517126 NUBP1P53384 320 aa9.39□□□□□ -0.91
RNU6-1220P-201ENST00000517126 TSPYL2Q9H2G4 693 aaPredicted RBP9.38□□□□□ -0.91
RNU6-1220P-201ENST00000517126 ZRANB1Q9UGI0 708 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms