RNA–Protein interactions for RNA: ENST00000517114.1

SCARNA16.5-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.5-201ENST00000517114 AEBP2Q6ZN18 517 aaPredicted RBP4.77□□□□□ -1.65
SCARNA16.5-201ENST00000517114 POTEDQ86YR6 584 aa4.61□□□□□ -1.67
SCARNA16.5-201ENST00000517114 CHIC1Q5VXU3 224 aa4.48□□□□□ -1.69
SCARNA16.5-201ENST00000517114 SENP3Q9H4L4 574 aaPredicted RBP4.04□□□□□ -1.76
SCARNA16.5-201ENST00000517114 PHF23Q9BUL5 403 aaPredicted RBP3.99□□□□□ -1.77
SCARNA16.5-201ENST00000517114 FOXD1Q16676 465 aa3.79□□□□□ -1.8
SCARNA16.5-201ENST00000517114 MSH5O43196 834 aa3.55□□□□□ -1.84
SCARNA16.5-201ENST00000517114 PLPPR3Q6T4P5 718 aa3.55□□□□□ -1.84
SCARNA16.5-201ENST00000517114 PIAS4Q8N2W9 510 aaPredicted RBP3.54□□□□□ -1.84
SCARNA16.5-201ENST00000517114 PPP6R1Q9UPN7 881 aa3.53□□□□□ -1.84
SCARNA16.5-201ENST00000517114 ADRA2BP18089 450 aa3.52□□□□□ -1.85
SCARNA16.5-201ENST00000517114 POTEHQ6S545 545 aa3.46□□□□□ -1.86
SCARNA16.5-201ENST00000517114 CACNB1Q02641 598 aaPredicted RBP3.44□□□□□ -1.86
SCARNA16.5-201ENST00000517114 MAPK8IP2Q13387 824 aaPredicted RBP3.24□□□□□ -1.89
SCARNA16.5-201ENST00000517114 DMRT2Q9Y5R5 561 aa3.2□□□□□ -1.9
SCARNA16.5-201ENST00000517114 SCAF1Q9H7N4 1312 aaKnown RBP3.17□□□□□ -1.9
SCARNA16.5-201ENST00000517114 PPP4R3CPQ6ZMV5 832 aa3.13□□□□□ -1.91
SCARNA16.5-201ENST00000517114 DCAF8L1A6NGE4 600 aa3.1□□□□□ -1.91
SCARNA16.5-201ENST00000517114 PLSCR2Q9NRY7 297 aa3.07□□□□□ -1.92
SCARNA16.5-201ENST00000517114 HOXD11P31277 338 aaPredicted RBP3.06□□□□□ -1.92
SCARNA16.5-201ENST00000517114 CNKSR2Q8WXI2 1034 aa3.06□□□□□ -1.92
SCARNA16.5-201ENST00000517114 RNF39Q9H2S5 420 aa3.03□□□□□ -1.92
SCARNA16.5-201ENST00000517114 RNF216Q9NWF9 866 aaPredicted RBP3.03□□□□□ -1.92
SCARNA16.5-201ENST00000517114 NCBP3Q53F19 620 aaKnown RBP2.97□□□□□ -1.93
SCARNA16.5-201ENST00000517114 NPM3O75607 178 aaKnown RBP2.96□□□□□ -1.94
SCARNA16.5-201ENST00000517114 C1QBPQ07021 282 aaKnown RBP2.95□□□□□ -1.94
SCARNA16.5-201ENST00000517114 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.94□□□□□ -1.94
SCARNA16.5-201ENST00000517114 SP7Q8TDD2 431 aaPredicted RBP2.93□□□□□ -1.94
SCARNA16.5-201ENST00000517114 DNAJC5BQ9UF47 199 aa2.92□□□□□ -1.94
SCARNA16.5-201ENST00000517114 KCNA4P22459 653 aa2.9□□□□□ -1.95
SCARNA16.5-201ENST00000517114 U3KPZ7 1027 aaPredicted RBP2.89□□□□□ -1.95
SCARNA16.5-201ENST00000517114 SPINK5Q9NQ38 1064 aaPredicted RBP2.86□□□□□ -1.95
SCARNA16.5-201ENST00000517114 CAPN15O75808 1086 aa2.84□□□□□ -1.95
SCARNA16.5-201ENST00000517114 SLC4A2P04920 1241 aa2.84□□□□□ -1.95
SCARNA16.5-201ENST00000517114 DSG3P32926 999 aa2.82□□□□□ -1.96
SCARNA16.5-201ENST00000517114 ABCB7O75027 752 aa2.81□□□□□ -1.96
SCARNA16.5-201ENST00000517114 TRHP20396 242 aaPredicted RBP2.8□□□□□ -1.96
SCARNA16.5-201ENST00000517114 LHX8Q68G74 356 aa2.76□□□□□ -1.97
SCARNA16.5-201ENST00000517114 ZNF219Q9P2Y4 722 aaPredicted RBP2.76□□□□□ -1.97
SCARNA16.5-201ENST00000517114 APLP2Q06481 763 aa2.75□□□□□ -1.97
SCARNA16.5-201ENST00000517114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.74□□□□□ -1.97
SCARNA16.5-201ENST00000517114 HNRNPUL2Q1KMD3 747 aaKnown RBP2.74□□□□□ -1.97
SCARNA16.5-201ENST00000517114 SAMD1Q6SPF0 538 aaPredicted RBP2.74□□□□□ -1.97
SCARNA16.5-201ENST00000517114 MYCNP04198 464 aaPredicted RBP2.73□□□□□ -1.97
SCARNA16.5-201ENST00000517114 SLC4A1APQ9BWU0 796 aaKnown RBP2.72□□□□□ -1.97
SCARNA16.5-201ENST00000517114 POLA2Q14181 598 aa2.7□□□□□ -1.98
SCARNA16.5-201ENST00000517114 ATF5Q9Y2D1 282 aaPredicted RBP2.7□□□□□ -1.98
SCARNA16.5-201ENST00000517114 CHRDL2Q6WN34 429 aa2.69□□□□□ -1.98
SCARNA16.5-201ENST00000517114 FOXD4L1Q9NU39 408 aa2.69□□□□□ -1.98
SCARNA16.5-201ENST00000517114 ZBTB22O15209 634 aa2.68□□□□□ -1.98
SCARNA16.5-201ENST00000517114 RBM42Q9BTD8 480 aaKnown RBP2.67□□□□□ -1.98
SCARNA16.5-201ENST00000517114 EVX2Q03828 476 aa2.64□□□□□ -1.99
SCARNA16.5-201ENST00000517114 OSCARQ8IYS5 282 aa2.64□□□□□ -1.99
SCARNA16.5-201ENST00000517114 POTEMA6NI47 508 aa2.62□□□□□ -1.99
SCARNA16.5-201ENST00000517114 ZBTB12Q9Y330 459 aaPredicted RBP2.62□□□□□ -1.99
SCARNA16.5-201ENST00000517114 AKT1S1Q96B36 256 aa2.61□□□□□ -1.99
SCARNA16.5-201ENST00000517114 HAX1O00165 279 aa2.6□□□□□ -1.99
SCARNA16.5-201ENST00000517114 PITPNM1O00562 1244 aa2.6□□□□□ -1.99
SCARNA16.5-201ENST00000517114 REM2Q8IYK8 340 aaPredicted RBP2.6□□□□□ -1.99
SCARNA16.5-201ENST00000517114 PIP4P2Q8N4L2 257 aa2.59□□□□□ -1.99
SCARNA16.5-201ENST00000517114 ATXN8OSP0DMR3 200 aa2.58□□□□□ -2
SCARNA16.5-201ENST00000517114 POTEGQ6S5H5 508 aa2.58□□□□□ -2
SCARNA16.5-201ENST00000517114 PCDH10Q9P2E7 1040 aa2.58□□□□□ -2
SCARNA16.5-201ENST00000517114 MKRN4PQ13434 485 aaPredicted RBP2.57□□□□□ -2
SCARNA16.5-201ENST00000517114 FBLN2P98095 1184 aa2.56□□□□□ -2
SCARNA16.5-201ENST00000517114 SPDYE2BA6NHP3 402 aa2.55□□□□□ -2
SCARNA16.5-201ENST00000517114 SPDYE6P0CI01 402 aa2.55□□□□□ -2
SCARNA16.5-201ENST00000517114 FXR2P51116 673 aaKnown RBP eCLIP2.55□□□□□ -2
SCARNA16.5-201ENST00000517114 SPDYE2Q495Y8 402 aa2.55□□□□□ -2
SCARNA16.5-201ENST00000517114 CLEC11AQ9Y240 323 aa2.53□□□□□ -2
SCARNA16.5-201ENST00000517114 PRKAR2AP13861 404 aaKnown RBP2.52□□□□□ -2.01
SCARNA16.5-201ENST00000517114 ZNF692Q9BU19 519 aaPredicted RBP2.52□□□□□ -2.01
SCARNA16.5-201ENST00000517114 SSUH2Q9Y2M2 353 aa2.52□□□□□ -2.01
SCARNA16.5-201ENST00000517114 SPDYE1Q8NFV5 336 aaPredicted RBP2.51□□□□□ -2.01
SCARNA16.5-201ENST00000517114 CHADLQ6NUI6 762 aa2.5□□□□□ -2.01
SCARNA16.5-201ENST00000517114 CSRNP3Q8WYN3 585 aa2.5□□□□□ -2.01
SCARNA16.5-201ENST00000517114 EHMT2Q96KQ7 1210 aa2.5□□□□□ -2.01
SCARNA16.5-201ENST00000517114 PABPN1Q86U42 306 aaKnown RBP eCLIP2.49□□□□□ -2.01
SCARNA16.5-201ENST00000517114 C19orf67A6NJJ6 358 aa2.47□□□□□ -2.01
SCARNA16.5-201ENST00000517114 GABBR2O75899 941 aa2.47□□□□□ -2.01
SCARNA16.5-201ENST00000517114 POTEIP0CG38 1075 aa2.47□□□□□ -2.01
SCARNA16.5-201ENST00000517114 OTUD5Q96G74 571 aa2.47□□□□□ -2.01
SCARNA16.5-201ENST00000517114 PRR29P0C7W0 189 aa2.46□□□□□ -2.02
SCARNA16.5-201ENST00000517114 LCE2DQ5TA82 110 aaPredicted RBP2.44□□□□□ -2.02
SCARNA16.5-201ENST00000517114 CD44P16070 742 aaKnown RBP2.43□□□□□ -2.02
SCARNA16.5-201ENST00000517114 FARP1Q9Y4F1 1045 aaPredicted RBP2.43□□□□□ -2.02
SCARNA16.5-201ENST00000517114 SPDYE4A6NLX3 237 aa2.42□□□□□ -2.02
SCARNA16.5-201ENST00000517114 CREBZFQ9NS37 354 aa2.42□□□□□ -2.02
SCARNA16.5-201ENST00000517114 ZRANB1Q9UGI0 708 aa2.4□□□□□ -2.03
SCARNA16.5-201ENST00000517114 POTEB2H3BUK9 544 aa2.39□□□□□ -2.03
SCARNA16.5-201ENST00000517114 ZNF579Q8NAF0 562 aaKnown RBP2.39□□□□□ -2.03
SCARNA16.5-201ENST00000517114 PHF12Q96QT6 1004 aa2.39□□□□□ -2.03
SCARNA16.5-201ENST00000517114 GALR2O43603 387 aaPredicted RBP2.38□□□□□ -2.03
SCARNA16.5-201ENST00000517114 STAG3Q9UJ98 1225 aa2.38□□□□□ -2.03
SCARNA16.5-201ENST00000517114 MNX1P50219 401 aaPredicted RBP2.37□□□□□ -2.03
SCARNA16.5-201ENST00000517114 MMRN1Q13201 1228 aa2.37□□□□□ -2.03
SCARNA16.5-201ENST00000517114 DCBLD2Q96PD2 775 aa2.37□□□□□ -2.03
SCARNA16.5-201ENST00000517114 PAK3O75914 559 aaPredicted RBP2.35□□□□□ -2.03
SCARNA16.5-201ENST00000517114 PROM2Q8N271 834 aa2.35□□□□□ -2.03
SCARNA16.5-201ENST00000517114 NPM1P06748 294 aaKnown RBP eCLIP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms