RNA–Protein interactions for RNA: ENST00000516959.1

RNU6-856P-201, Transcript of RNA, U6 small nuclear 856, pseudogene, humanhuman

BASIC

Gene RNU6-856P, Length 98 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-856P-201ENST00000516959 AEBP2Q6ZN18 517 aaPredicted RBP9.37□□□□□ -0.91
RNU6-856P-201ENST00000516959 CHIC1Q5VXU3 224 aa9.25□□□□□ -0.93
RNU6-856P-201ENST00000516959 PHF23Q9BUL5 403 aaPredicted RBP8.17□□□□□ -1.1
RNU6-856P-201ENST00000516959 SENP3Q9H4L4 574 aaPredicted RBP7.89□□□□□ -1.15
RNU6-856P-201ENST00000516959 PLPPR3Q6T4P5 718 aa7.56□□□□□ -1.2
RNU6-856P-201ENST00000516959 FOXD1Q16676 465 aa7.33□□□□□ -1.24
RNU6-856P-201ENST00000516959 ADRA2BP18089 450 aa7.19□□□□□ -1.26
RNU6-856P-201ENST00000516959 PPP6R1Q9UPN7 881 aa7.17□□□□□ -1.26
RNU6-856P-201ENST00000516959 PIAS4Q8N2W9 510 aaPredicted RBP6.97□□□□□ -1.29
RNU6-856P-201ENST00000516959 KCNA4P22459 653 aa6.73□□□□□ -1.33
RNU6-856P-201ENST00000516959 PPP4R3CPQ6ZMV5 832 aa6.7□□□□□ -1.34
RNU6-856P-201ENST00000516959 MSH5O43196 834 aa6.67□□□□□ -1.34
RNU6-856P-201ENST00000516959 NCBP3Q53F19 620 aaKnown RBP6.53□□□□□ -1.36
RNU6-856P-201ENST00000516959 SCAF1Q9H7N4 1312 aaKnown RBP6.5□□□□□ -1.37
RNU6-856P-201ENST00000516959 NPM3O75607 178 aaKnown RBP6.48□□□□□ -1.37
RNU6-856P-201ENST00000516959 MAPK8IP2Q13387 824 aaPredicted RBP6.48□□□□□ -1.37
RNU6-856P-201ENST00000516959 CNKSR2Q8WXI2 1034 aa6.46□□□□□ -1.38
RNU6-856P-201ENST00000516959 EHMT2Q96KQ7 1210 aa6.46□□□□□ -1.38
RNU6-856P-201ENST00000516959 SLC4A1APQ9BWU0 796 aaKnown RBP6.42□□□□□ -1.38
RNU6-856P-201ENST00000516959 DMRT2Q9Y5R5 561 aa6.33□□□□□ -1.4
RNU6-856P-201ENST00000516959 RNF216Q9NWF9 866 aaPredicted RBP6.29□□□□□ -1.4
RNU6-856P-201ENST00000516959 CSRNP3Q8WYN3 585 aa6.25□□□□□ -1.41
RNU6-856P-201ENST00000516959 HOXD11P31277 338 aaPredicted RBP6.22□□□□□ -1.41
RNU6-856P-201ENST00000516959 ZBTB22O15209 634 aa6.21□□□□□ -1.42
RNU6-856P-201ENST00000516959 DNAJC5BQ9UF47 199 aa6.15□□□□□ -1.42
RNU6-856P-201ENST00000516959 FOXD4L1Q9NU39 408 aa6.13□□□□□ -1.43
RNU6-856P-201ENST00000516959 DCAF8L1A6NGE4 600 aa6.12□□□□□ -1.43
RNU6-856P-201ENST00000516959 SLC4A2P04920 1241 aa6.08□□□□□ -1.44
RNU6-856P-201ENST00000516959 MYCNP04198 464 aaPredicted RBP5.98□□□□□ -1.45
RNU6-856P-201ENST00000516959 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.98□□□□□ -1.45
RNU6-856P-201ENST00000516959 U3KPZ7 1027 aaPredicted RBP5.9□□□□□ -1.46
RNU6-856P-201ENST00000516959 POTEDQ86YR6 584 aa5.88□□□□□ -1.47
RNU6-856P-201ENST00000516959 ATXN8OSP0DMR3 200 aa5.85□□□□□ -1.47
RNU6-856P-201ENST00000516959 ATF5Q9Y2D1 282 aaPredicted RBP5.84□□□□□ -1.47
RNU6-856P-201ENST00000516959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.81□□□□□ -1.48
RNU6-856P-201ENST00000516959 HNRNPUL2Q1KMD3 747 aaKnown RBP5.81□□□□□ -1.48
RNU6-856P-201ENST00000516959 SAMD1Q6SPF0 538 aaPredicted RBP5.81□□□□□ -1.48
RNU6-856P-201ENST00000516959 RNF39Q9H2S5 420 aa5.74□□□□□ -1.49
RNU6-856P-201ENST00000516959 APLP2Q06481 763 aa5.72□□□□□ -1.49
RNU6-856P-201ENST00000516959 SPINK5Q9NQ38 1064 aaPredicted RBP5.72□□□□□ -1.49
RNU6-856P-201ENST00000516959 TRHP20396 242 aaPredicted RBP5.7□□□□□ -1.5
RNU6-856P-201ENST00000516959 ZNF219Q9P2Y4 722 aaPredicted RBP5.7□□□□□ -1.5
RNU6-856P-201ENST00000516959 CAPN15O75808 1086 aa5.68□□□□□ -1.5
RNU6-856P-201ENST00000516959 FKBP8Q14318 412 aa5.68□□□□□ -1.5
RNU6-856P-201ENST00000516959 C1QBPQ07021 282 aaKnown RBP5.65□□□□□ -1.5
RNU6-856P-201ENST00000516959 ABCB7O75027 752 aa5.62□□□□□ -1.51
RNU6-856P-201ENST00000516959 POLA2Q14181 598 aa5.6□□□□□ -1.51
RNU6-856P-201ENST00000516959 MKRN4PQ13434 485 aaPredicted RBP5.58□□□□□ -1.52
RNU6-856P-201ENST00000516959 FBLN2P98095 1184 aa5.55□□□□□ -1.52
RNU6-856P-201ENST00000516959 DSG3P32926 999 aa5.52□□□□□ -1.53
RNU6-856P-201ENST00000516959 CACNB1Q02641 598 aaPredicted RBP5.52□□□□□ -1.53
RNU6-856P-201ENST00000516959 SPDYE4A6NLX3 237 aa5.51□□□□□ -1.53
RNU6-856P-201ENST00000516959 ZBTB12Q9Y330 459 aaPredicted RBP5.49□□□□□ -1.53
RNU6-856P-201ENST00000516959 OSCARQ8IYS5 282 aa5.45□□□□□ -1.54
RNU6-856P-201ENST00000516959 RTN4Q9NQC3 1192 aaKnown RBP5.41□□□□□ -1.54
RNU6-856P-201ENST00000516959 PROM2Q8N271 834 aa5.39□□□□□ -1.55
RNU6-856P-201ENST00000516959 AMER1Q5JTC6 1135 aaPredicted RBP5.38□□□□□ -1.55
RNU6-856P-201ENST00000516959 ZNF692Q9BU19 519 aaPredicted RBP5.38□□□□□ -1.55
RNU6-856P-201ENST00000516959 FBXO3Q9UK99 471 aa5.37□□□□□ -1.55
RNU6-856P-201ENST00000516959 SPDYE2BA6NHP3 402 aa5.35□□□□□ -1.55
RNU6-856P-201ENST00000516959 SPDYE6P0CI01 402 aa5.35□□□□□ -1.55
RNU6-856P-201ENST00000516959 SPDYE2Q495Y8 402 aa5.35□□□□□ -1.55
RNU6-856P-201ENST00000516959 VASPP50552 380 aaPredicted RBP5.34□□□□□ -1.55
RNU6-856P-201ENST00000516959 SSUH2Q9Y2M2 353 aa5.34□□□□□ -1.55
RNU6-856P-201ENST00000516959 PABPN1Q86U42 306 aaKnown RBP eCLIP5.33□□□□□ -1.56
RNU6-856P-201ENST00000516959 IFNLR1Q8IU57 520 aaPredicted RBP5.27□□□□□ -1.57
RNU6-856P-201ENST00000516959 KLHL34Q8N239 644 aa5.23□□□□□ -1.57
RNU6-856P-201ENST00000516959 PLCD3Q8N3E9 789 aa5.23□□□□□ -1.57
RNU6-856P-201ENST00000516959 RBM42Q9BTD8 480 aaKnown RBP5.23□□□□□ -1.57
RNU6-856P-201ENST00000516959 STAG3Q9UJ98 1225 aa5.22□□□□□ -1.57
RNU6-856P-201ENST00000516959 MIER1Q8N108 512 aa5.2□□□□□ -1.58
RNU6-856P-201ENST00000516959 AKT1S1Q96B36 256 aa5.2□□□□□ -1.58
RNU6-856P-201ENST00000516959 CLEC11AQ9Y240 323 aa5.2□□□□□ -1.58
RNU6-856P-201ENST00000516959 SPOCK2Q92563 424 aa5.18□□□□□ -1.58
RNU6-856P-201ENST00000516959 REM2Q8IYK8 340 aaPredicted RBP5.17□□□□□ -1.58
RNU6-856P-201ENST00000516959 SPDYE1Q8NFV5 336 aaPredicted RBP5.17□□□□□ -1.58
RNU6-856P-201ENST00000516959 DCAF8L2P0C7V8 631 aa5.16□□□□□ -1.58
RNU6-856P-201ENST00000516959 PLEKHG5O94827 1062 aa5.15□□□□□ -1.59
RNU6-856P-201ENST00000516959 PITPNM1O00562 1244 aa5.14□□□□□ -1.59
RNU6-856P-201ENST00000516959 PKD2Q13563 968 aa5.14□□□□□ -1.59
RNU6-856P-201ENST00000516959 PRR29P0C7W0 189 aa5.13□□□□□ -1.59
RNU6-856P-201ENST00000516959 ECM2O94769 699 aaPredicted RBP5.11□□□□□ -1.59
RNU6-856P-201ENST00000516959 ZBTB47Q9UFB7 747 aaPredicted RBP5.11□□□□□ -1.59
RNU6-856P-201ENST00000516959 CIZ1Q9ULV3 898 aaPredicted RBP5.11□□□□□ -1.59
RNU6-856P-201ENST00000516959 SLC24A1O60721 1099 aa5.1□□□□□ -1.59
RNU6-856P-201ENST00000516959 CREBZFQ9NS37 354 aa5.1□□□□□ -1.59
RNU6-856P-201ENST00000516959 CHADLQ6NUI6 762 aa5.07□□□□□ -1.6
RNU6-856P-201ENST00000516959 RGL2O15211 777 aa5.06□□□□□ -1.6
RNU6-856P-201ENST00000516959 MNX1P50219 401 aaPredicted RBP5.05□□□□□ -1.6
RNU6-856P-201ENST00000516959 NUBP1P53384 320 aa5.05□□□□□ -1.6
RNU6-856P-201ENST00000516959 DCAF8Q5TAQ9 597 aa5.03□□□□□ -1.6
RNU6-856P-201ENST00000516959 RASEFQ8IZ41 740 aa5.03□□□□□ -1.6
RNU6-856P-201ENST00000516959 GSE1Q14687 1217 aa5.02□□□□□ -1.61
RNU6-856P-201ENST00000516959 FAM212AQ96EL1 285 aa5.02□□□□□ -1.61
RNU6-856P-201ENST00000516959 PRKAR2AP13861 404 aaKnown RBP5.01□□□□□ -1.61
RNU6-856P-201ENST00000516959 NPM1P06748 294 aaKnown RBP eCLIP5□□□□□ -1.61
RNU6-856P-201ENST00000516959 RNF25Q96BH1 459 aaPredicted RBP5□□□□□ -1.61
RNU6-856P-201ENST00000516959 PLCB2Q00722 1185 aa4.99□□□□□ -1.61
RNU6-856P-201ENST00000516959 CHRDL2Q6WN34 429 aa4.99□□□□□ -1.61
RNU6-856P-201ENST00000516959 TRIM41Q8WV44 630 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms