RNA–Protein interactions for RNA: ENST00000516682.1

RNU1-142P-201, Transcript of RNA, U1 small nuclear 142, pseudogene, humanhuman

BASIC

Gene RNU1-142P, Length 145 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-142P-201ENST00000516682 AEBP2Q6ZN18 517 aaPredicted RBP9.27□□□□□ -0.93
RNU1-142P-201ENST00000516682 CHIC1Q5VXU3 224 aa9.13□□□□□ -0.95
RNU1-142P-201ENST00000516682 PHF23Q9BUL5 403 aaPredicted RBP8.07□□□□□ -1.12
RNU1-142P-201ENST00000516682 SENP3Q9H4L4 574 aaPredicted RBP7.8□□□□□ -1.16
RNU1-142P-201ENST00000516682 PLPPR3Q6T4P5 718 aa7.43□□□□□ -1.22
RNU1-142P-201ENST00000516682 FOXD1Q16676 465 aa7.26□□□□□ -1.25
RNU1-142P-201ENST00000516682 PPP6R1Q9UPN7 881 aa7.08□□□□□ -1.28
RNU1-142P-201ENST00000516682 ADRA2BP18089 450 aa7.05□□□□□ -1.28
RNU1-142P-201ENST00000516682 PIAS4Q8N2W9 510 aaPredicted RBP6.82□□□□□ -1.32
RNU1-142P-201ENST00000516682 MSH5O43196 834 aa6.62□□□□□ -1.35
RNU1-142P-201ENST00000516682 PPP4R3CPQ6ZMV5 832 aa6.57□□□□□ -1.36
RNU1-142P-201ENST00000516682 KCNA4P22459 653 aa6.53□□□□□ -1.36
RNU1-142P-201ENST00000516682 SCAF1Q9H7N4 1312 aaKnown RBP6.43□□□□□ -1.38
RNU1-142P-201ENST00000516682 NCBP3Q53F19 620 aaKnown RBP6.39□□□□□ -1.39
RNU1-142P-201ENST00000516682 MAPK8IP2Q13387 824 aaPredicted RBP6.38□□□□□ -1.39
RNU1-142P-201ENST00000516682 CNKSR2Q8WXI2 1034 aa6.37□□□□□ -1.39
RNU1-142P-201ENST00000516682 NPM3O75607 178 aaKnown RBP6.34□□□□□ -1.39
RNU1-142P-201ENST00000516682 DMRT2Q9Y5R5 561 aa6.27□□□□□ -1.41
RNU1-142P-201ENST00000516682 RNF216Q9NWF9 866 aaPredicted RBP6.23□□□□□ -1.41
RNU1-142P-201ENST00000516682 DNAJC5BQ9UF47 199 aa6.22□□□□□ -1.41
RNU1-142P-201ENST00000516682 SLC4A1APQ9BWU0 796 aaKnown RBP6.21□□□□□ -1.42
RNU1-142P-201ENST00000516682 HOXD11P31277 338 aaPredicted RBP6.2□□□□□ -1.42
RNU1-142P-201ENST00000516682 EHMT2Q96KQ7 1210 aa6.11□□□□□ -1.43
RNU1-142P-201ENST00000516682 CSRNP3Q8WYN3 585 aa6.08□□□□□ -1.44
RNU1-142P-201ENST00000516682 ZBTB22O15209 634 aa6.03□□□□□ -1.44
RNU1-142P-201ENST00000516682 SLC4A2P04920 1241 aa5.99□□□□□ -1.45
RNU1-142P-201ENST00000516682 FOXD4L1Q9NU39 408 aa5.96□□□□□ -1.46
RNU1-142P-201ENST00000516682 DCAF8L1A6NGE4 600 aa5.89□□□□□ -1.47
RNU1-142P-201ENST00000516682 POTEDQ86YR6 584 aa5.87□□□□□ -1.47
RNU1-142P-201ENST00000516682 MYCNP04198 464 aaPredicted RBP5.83□□□□□ -1.48
RNU1-142P-201ENST00000516682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.83□□□□□ -1.48
RNU1-142P-201ENST00000516682 U3KPZ7 1027 aaPredicted RBP5.8□□□□□ -1.48
RNU1-142P-201ENST00000516682 ATXN8OSP0DMR3 200 aa5.79□□□□□ -1.48
RNU1-142P-201ENST00000516682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.72□□□□□ -1.49
RNU1-142P-201ENST00000516682 HNRNPUL2Q1KMD3 747 aaKnown RBP5.72□□□□□ -1.49
RNU1-142P-201ENST00000516682 SAMD1Q6SPF0 538 aaPredicted RBP5.71□□□□□ -1.5
RNU1-142P-201ENST00000516682 RNF39Q9H2S5 420 aa5.71□□□□□ -1.5
RNU1-142P-201ENST00000516682 ATF5Q9Y2D1 282 aaPredicted RBP5.71□□□□□ -1.5
RNU1-142P-201ENST00000516682 C1QBPQ07021 282 aaKnown RBP5.63□□□□□ -1.51
RNU1-142P-201ENST00000516682 APLP2Q06481 763 aa5.62□□□□□ -1.51
RNU1-142P-201ENST00000516682 SPINK5Q9NQ38 1064 aaPredicted RBP5.6□□□□□ -1.51
RNU1-142P-201ENST00000516682 ZNF219Q9P2Y4 722 aaPredicted RBP5.59□□□□□ -1.51
RNU1-142P-201ENST00000516682 CAPN15O75808 1086 aa5.52□□□□□ -1.53
RNU1-142P-201ENST00000516682 TRHP20396 242 aaPredicted RBP5.52□□□□□ -1.53
RNU1-142P-201ENST00000516682 POLA2Q14181 598 aa5.49□□□□□ -1.53
RNU1-142P-201ENST00000516682 DSG3P32926 999 aa5.47□□□□□ -1.53
RNU1-142P-201ENST00000516682 MKRN4PQ13434 485 aaPredicted RBP5.47□□□□□ -1.53
RNU1-142P-201ENST00000516682 CACNB1Q02641 598 aaPredicted RBP5.44□□□□□ -1.54
RNU1-142P-201ENST00000516682 FKBP8Q14318 412 aa5.44□□□□□ -1.54
RNU1-142P-201ENST00000516682 ABCB7O75027 752 aa5.43□□□□□ -1.54
RNU1-142P-201ENST00000516682 FBLN2P98095 1184 aa5.39□□□□□ -1.55
RNU1-142P-201ENST00000516682 ZBTB12Q9Y330 459 aaPredicted RBP5.38□□□□□ -1.55
RNU1-142P-201ENST00000516682 PROM2Q8N271 834 aa5.35□□□□□ -1.55
RNU1-142P-201ENST00000516682 SPDYE4A6NLX3 237 aa5.34□□□□□ -1.55
RNU1-142P-201ENST00000516682 OSCARQ8IYS5 282 aa5.28□□□□□ -1.56
RNU1-142P-201ENST00000516682 SPDYE2BA6NHP3 402 aa5.27□□□□□ -1.57
RNU1-142P-201ENST00000516682 SPDYE6P0CI01 402 aa5.27□□□□□ -1.57
RNU1-142P-201ENST00000516682 SPDYE2Q495Y8 402 aa5.27□□□□□ -1.57
RNU1-142P-201ENST00000516682 SSUH2Q9Y2M2 353 aa5.26□□□□□ -1.57
RNU1-142P-201ENST00000516682 ZNF692Q9BU19 519 aaPredicted RBP5.25□□□□□ -1.57
RNU1-142P-201ENST00000516682 FBXO3Q9UK99 471 aa5.22□□□□□ -1.57
RNU1-142P-201ENST00000516682 PABPN1Q86U42 306 aaKnown RBP eCLIP5.19□□□□□ -1.58
RNU1-142P-201ENST00000516682 RBM42Q9BTD8 480 aaKnown RBP5.17□□□□□ -1.58
RNU1-142P-201ENST00000516682 VASPP50552 380 aaPredicted RBP5.15□□□□□ -1.59
RNU1-142P-201ENST00000516682 AKT1S1Q96B36 256 aa5.15□□□□□ -1.59
RNU1-142P-201ENST00000516682 RTN4Q9NQC3 1192 aaKnown RBP5.14□□□□□ -1.59
RNU1-142P-201ENST00000516682 STAG3Q9UJ98 1225 aa5.14□□□□□ -1.59
RNU1-142P-201ENST00000516682 AMER1Q5JTC6 1135 aaPredicted RBP5.13□□□□□ -1.59
RNU1-142P-201ENST00000516682 IFNLR1Q8IU57 520 aaPredicted RBP5.12□□□□□ -1.59
RNU1-142P-201ENST00000516682 REM2Q8IYK8 340 aaPredicted RBP5.1□□□□□ -1.59
RNU1-142P-201ENST00000516682 SPDYE1Q8NFV5 336 aaPredicted RBP5.07□□□□□ -1.6
RNU1-142P-201ENST00000516682 MIER1Q8N108 512 aa5.04□□□□□ -1.6
RNU1-142P-201ENST00000516682 PITPNM1O00562 1244 aa5.03□□□□□ -1.6
RNU1-142P-201ENST00000516682 PLCD3Q8N3E9 789 aa5.03□□□□□ -1.6
RNU1-142P-201ENST00000516682 PRR29P0C7W0 189 aa5.01□□□□□ -1.61
RNU1-142P-201ENST00000516682 SPOCK2Q92563 424 aa5.01□□□□□ -1.61
RNU1-142P-201ENST00000516682 CREBZFQ9NS37 354 aa5.01□□□□□ -1.61
RNU1-142P-201ENST00000516682 CLEC11AQ9Y240 323 aa5.01□□□□□ -1.61
RNU1-142P-201ENST00000516682 KLHL34Q8N239 644 aa5□□□□□ -1.61
RNU1-142P-201ENST00000516682 MNX1P50219 401 aaPredicted RBP4.99□□□□□ -1.61
RNU1-142P-201ENST00000516682 PKD2Q13563 968 aa4.99□□□□□ -1.61
RNU1-142P-201ENST00000516682 ZBTB47Q9UFB7 747 aaPredicted RBP4.98□□□□□ -1.61
RNU1-142P-201ENST00000516682 PLEKHG5O94827 1062 aa4.97□□□□□ -1.61
RNU1-142P-201ENST00000516682 FXR2P51116 673 aaKnown RBP eCLIP4.95□□□□□ -1.62
RNU1-142P-201ENST00000516682 NUBP1P53384 320 aa4.95□□□□□ -1.62
RNU1-142P-201ENST00000516682 CHRDL2Q6WN34 429 aa4.92□□□□□ -1.62
RNU1-142P-201ENST00000516682 CHADLQ6NUI6 762 aa4.91□□□□□ -1.62
RNU1-142P-201ENST00000516682 FARP1Q9Y4F1 1045 aaPredicted RBP4.9□□□□□ -1.63
RNU1-142P-201ENST00000516682 ECM2O94769 699 aaPredicted RBP4.89□□□□□ -1.63
RNU1-142P-201ENST00000516682 NPM1P06748 294 aaKnown RBP eCLIP4.89□□□□□ -1.63
RNU1-142P-201ENST00000516682 PRKAR2AP13861 404 aaKnown RBP4.89□□□□□ -1.63
RNU1-142P-201ENST00000516682 GSE1Q14687 1217 aa4.89□□□□□ -1.63
RNU1-142P-201ENST00000516682 RASEFQ8IZ41 740 aa4.89□□□□□ -1.63
RNU1-142P-201ENST00000516682 PIP4P2Q8N4L2 257 aa4.89□□□□□ -1.63
RNU1-142P-201ENST00000516682 TRIM41Q8WV44 630 aa4.88□□□□□ -1.63
RNU1-142P-201ENST00000516682 CIZ1Q9ULV3 898 aaPredicted RBP4.88□□□□□ -1.63
RNU1-142P-201ENST00000516682 RGL2O15211 777 aa4.87□□□□□ -1.63
RNU1-142P-201ENST00000516682 CHRM1P11229 460 aaPredicted RBP4.87□□□□□ -1.63
RNU1-142P-201ENST00000516682 DCAF8Q5TAQ9 597 aa4.86□□□□□ -1.63
RNU1-142P-201ENST00000516682 FAM212AQ96EL1 285 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms