RNA–Protein interactions for RNA: ENST00000516680.1

RNU6-197P-201, Transcript of RNA, U6 small nuclear 197, pseudogene, humanhuman

BASIC

Gene RNU6-197P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-197P-201ENST00000516680 AEBP2Q6ZN18 517 aaPredicted RBP12.96□□□□□ -0.33
RNU6-197P-201ENST00000516680 CHIC1Q5VXU3 224 aa12.22□□□□□ -0.45
RNU6-197P-201ENST00000516680 SENP3Q9H4L4 574 aaPredicted RBP11□□□□□ -0.65
RNU6-197P-201ENST00000516680 PHF23Q9BUL5 403 aaPredicted RBP10.88□□□□□ -0.67
RNU6-197P-201ENST00000516680 FOXD1Q16676 465 aa10.3□□□□□ -0.76
RNU6-197P-201ENST00000516680 PLPPR3Q6T4P5 718 aa9.72□□□□□ -0.85
RNU6-197P-201ENST00000516680 MSH5O43196 834 aa9.62□□□□□ -0.87
RNU6-197P-201ENST00000516680 PIAS4Q8N2W9 510 aaPredicted RBP9.61□□□□□ -0.87
RNU6-197P-201ENST00000516680 PPP6R1Q9UPN7 881 aa9.61□□□□□ -0.87
RNU6-197P-201ENST00000516680 ADRA2BP18089 450 aa9.57□□□□□ -0.88
RNU6-197P-201ENST00000516680 POTEDQ86YR6 584 aa9.52□□□□□ -0.89
RNU6-197P-201ENST00000516680 MAPK8IP2Q13387 824 aaPredicted RBP8.81□□□□□ -1
RNU6-197P-201ENST00000516680 DMRT2Q9Y5R5 561 aa8.73□□□□□ -1.01
RNU6-197P-201ENST00000516680 SCAF1Q9H7N4 1312 aaKnown RBP8.68□□□□□ -1.02
RNU6-197P-201ENST00000516680 PPP4R3CPQ6ZMV5 832 aa8.54□□□□□ -1.04
RNU6-197P-201ENST00000516680 DCAF8L1A6NGE4 600 aa8.39□□□□□ -1.07
RNU6-197P-201ENST00000516680 HOXD11P31277 338 aaPredicted RBP8.39□□□□□ -1.07
RNU6-197P-201ENST00000516680 CNKSR2Q8WXI2 1034 aa8.36□□□□□ -1.07
RNU6-197P-201ENST00000516680 CACNB1Q02641 598 aaPredicted RBP8.3□□□□□ -1.08
RNU6-197P-201ENST00000516680 RNF216Q9NWF9 866 aaPredicted RBP8.3□□□□□ -1.08
RNU6-197P-201ENST00000516680 RNF39Q9H2S5 420 aa8.22□□□□□ -1.09
RNU6-197P-201ENST00000516680 NCBP3Q53F19 620 aaKnown RBP8.14□□□□□ -1.11
RNU6-197P-201ENST00000516680 NPM3O75607 178 aaKnown RBP8.08□□□□□ -1.12
RNU6-197P-201ENST00000516680 C1QBPQ07021 282 aaKnown RBP8.08□□□□□ -1.12
RNU6-197P-201ENST00000516680 DNAJC5BQ9UF47 199 aa8.07□□□□□ -1.12
RNU6-197P-201ENST00000516680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.99□□□□□ -1.13
RNU6-197P-201ENST00000516680 KCNA4P22459 653 aa7.9□□□□□ -1.14
RNU6-197P-201ENST00000516680 U3KPZ7 1027 aaPredicted RBP7.84□□□□□ -1.15
RNU6-197P-201ENST00000516680 SPINK5Q9NQ38 1064 aaPredicted RBP7.76□□□□□ -1.17
RNU6-197P-201ENST00000516680 SLC4A2P04920 1241 aa7.74□□□□□ -1.17
RNU6-197P-201ENST00000516680 CAPN15O75808 1086 aa7.72□□□□□ -1.17
RNU6-197P-201ENST00000516680 DSG3P32926 999 aa7.69□□□□□ -1.18
RNU6-197P-201ENST00000516680 TRHP20396 242 aaPredicted RBP7.59□□□□□ -1.19
RNU6-197P-201ENST00000516680 ABCB7O75027 752 aa7.56□□□□□ -1.2
RNU6-197P-201ENST00000516680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.54□□□□□ -1.2
RNU6-197P-201ENST00000516680 APLP2Q06481 763 aa7.54□□□□□ -1.2
RNU6-197P-201ENST00000516680 HNRNPUL2Q1KMD3 747 aaKnown RBP7.54□□□□□ -1.2
RNU6-197P-201ENST00000516680 ZNF219Q9P2Y4 722 aaPredicted RBP7.54□□□□□ -1.2
RNU6-197P-201ENST00000516680 SAMD1Q6SPF0 538 aaPredicted RBP7.51□□□□□ -1.21
RNU6-197P-201ENST00000516680 MYCNP04198 464 aaPredicted RBP7.45□□□□□ -1.22
RNU6-197P-201ENST00000516680 POTEHQ6S545 545 aa7.44□□□□□ -1.22
RNU6-197P-201ENST00000516680 SLC4A1APQ9BWU0 796 aaKnown RBP7.42□□□□□ -1.22
RNU6-197P-201ENST00000516680 POLA2Q14181 598 aa7.37□□□□□ -1.23
RNU6-197P-201ENST00000516680 FOXD4L1Q9NU39 408 aa7.36□□□□□ -1.23
RNU6-197P-201ENST00000516680 ATF5Q9Y2D1 282 aaPredicted RBP7.33□□□□□ -1.24
RNU6-197P-201ENST00000516680 RBM42Q9BTD8 480 aaKnown RBP7.3□□□□□ -1.24
RNU6-197P-201ENST00000516680 ZBTB22O15209 634 aa7.28□□□□□ -1.24
RNU6-197P-201ENST00000516680 CHRDL2Q6WN34 429 aa7.2□□□□□ -1.26
RNU6-197P-201ENST00000516680 ZBTB12Q9Y330 459 aaPredicted RBP7.16□□□□□ -1.26
RNU6-197P-201ENST00000516680 OSCARQ8IYS5 282 aa7.15□□□□□ -1.26
RNU6-197P-201ENST00000516680 AKT1S1Q96B36 256 aa7.13□□□□□ -1.27
RNU6-197P-201ENST00000516680 ATXN8OSP0DMR3 200 aa7.09□□□□□ -1.27
RNU6-197P-201ENST00000516680 REM2Q8IYK8 340 aaPredicted RBP7.08□□□□□ -1.28
RNU6-197P-201ENST00000516680 PITPNM1O00562 1244 aa7.02□□□□□ -1.29
RNU6-197P-201ENST00000516680 PIP4P2Q8N4L2 257 aa7.02□□□□□ -1.29
RNU6-197P-201ENST00000516680 FBLN2P98095 1184 aa6.98□□□□□ -1.29
RNU6-197P-201ENST00000516680 MKRN4PQ13434 485 aaPredicted RBP6.98□□□□□ -1.29
RNU6-197P-201ENST00000516680 SPDYE2BA6NHP3 402 aa6.96□□□□□ -1.3
RNU6-197P-201ENST00000516680 SPDYE6P0CI01 402 aa6.96□□□□□ -1.3
RNU6-197P-201ENST00000516680 FXR2P51116 673 aaKnown RBP eCLIP6.96□□□□□ -1.3
RNU6-197P-201ENST00000516680 SPDYE2Q495Y8 402 aa6.96□□□□□ -1.3
RNU6-197P-201ENST00000516680 SP7Q8TDD2 431 aaPredicted RBP6.94□□□□□ -1.3
RNU6-197P-201ENST00000516680 HAX1O00165 279 aa6.89□□□□□ -1.31
RNU6-197P-201ENST00000516680 SSUH2Q9Y2M2 353 aa6.89□□□□□ -1.31
RNU6-197P-201ENST00000516680 CSRNP3Q8WYN3 585 aa6.88□□□□□ -1.31
RNU6-197P-201ENST00000516680 ZNF692Q9BU19 519 aaPredicted RBP6.88□□□□□ -1.31
RNU6-197P-201ENST00000516680 CLEC11AQ9Y240 323 aa6.88□□□□□ -1.31
RNU6-197P-201ENST00000516680 EVX2Q03828 476 aa6.85□□□□□ -1.31
RNU6-197P-201ENST00000516680 SPDYE1Q8NFV5 336 aaPredicted RBP6.85□□□□□ -1.31
RNU6-197P-201ENST00000516680 PRKAR2AP13861 404 aaKnown RBP6.83□□□□□ -1.32
RNU6-197P-201ENST00000516680 PABPN1Q86U42 306 aaKnown RBP eCLIP6.8□□□□□ -1.32
RNU6-197P-201ENST00000516680 CHADLQ6NUI6 762 aa6.78□□□□□ -1.32
RNU6-197P-201ENST00000516680 EHMT2Q96KQ7 1210 aa6.77□□□□□ -1.33
RNU6-197P-201ENST00000516680 C19orf67A6NJJ6 358 aa6.74□□□□□ -1.33
RNU6-197P-201ENST00000516680 PRR29P0C7W0 189 aa6.74□□□□□ -1.33
RNU6-197P-201ENST00000516680 GABBR2O75899 941 aa6.66□□□□□ -1.34
RNU6-197P-201ENST00000516680 FARP1Q9Y4F1 1045 aaPredicted RBP6.64□□□□□ -1.35
RNU6-197P-201ENST00000516680 CD44P16070 742 aaKnown RBP6.61□□□□□ -1.35
RNU6-197P-201ENST00000516680 SPDYE4A6NLX3 237 aa6.6□□□□□ -1.35
RNU6-197P-201ENST00000516680 CREBZFQ9NS37 354 aa6.58□□□□□ -1.36
RNU6-197P-201ENST00000516680 STAG3Q9UJ98 1225 aa6.55□□□□□ -1.36
RNU6-197P-201ENST00000516680 POTEIP0CG38 1075 aa6.54□□□□□ -1.36
RNU6-197P-201ENST00000516680 LHX8Q68G74 356 aa6.51□□□□□ -1.37
RNU6-197P-201ENST00000516680 ZRANB1Q9UGI0 708 aa6.51□□□□□ -1.37
RNU6-197P-201ENST00000516680 ZNF579Q8NAF0 562 aaKnown RBP6.5□□□□□ -1.37
RNU6-197P-201ENST00000516680 MNX1P50219 401 aaPredicted RBP6.47□□□□□ -1.37
RNU6-197P-201ENST00000516680 GALR2O43603 387 aaPredicted RBP6.46□□□□□ -1.38
RNU6-197P-201ENST00000516680 CLCN6P51797 869 aa6.46□□□□□ -1.38
RNU6-197P-201ENST00000516680 DCBLD2Q96PD2 775 aa6.45□□□□□ -1.38
RNU6-197P-201ENST00000516680 PHF12Q96QT6 1004 aa6.44□□□□□ -1.38
RNU6-197P-201ENST00000516680 PROM2Q8N271 834 aa6.43□□□□□ -1.38
RNU6-197P-201ENST00000516680 PAK3O75914 559 aaPredicted RBP6.41□□□□□ -1.38
RNU6-197P-201ENST00000516680 NPM1P06748 294 aaKnown RBP eCLIP6.41□□□□□ -1.38
RNU6-197P-201ENST00000516680 MS4A3Q96HJ5 214 aa6.35□□□□□ -1.39
RNU6-197P-201ENST00000516680 PELP1Q8IZL8 1130 aaKnown RBP6.34□□□□□ -1.39
RNU6-197P-201ENST00000516680 TSPYL2Q9H2G4 693 aaPredicted RBP6.34□□□□□ -1.39
RNU6-197P-201ENST00000516680 POTEB2H3BUK9 544 aa6.33□□□□□ -1.4
RNU6-197P-201ENST00000516680 CCDC61Q9Y6R9 512 aa6.31□□□□□ -1.4
RNU6-197P-201ENST00000516680 MIER1Q8N108 512 aa6.3□□□□□ -1.4
RNU6-197P-201ENST00000516680 OTUD5Q96G74 571 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms