RNA–Protein interactions for RNA: ENST00000516661.1

RNU6-551P-201, Transcript of RNA, U6 small nuclear 551, pseudogene, humanhuman

BASIC

Gene RNU6-551P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-551P-201ENST00000516661 AEBP2Q6ZN18 517 aaPredicted RBP29.78■■■□□ 2.36
RNU6-551P-201ENST00000516661 CHIC1Q5VXU3 224 aa29.57■■■□□ 2.32
RNU6-551P-201ENST00000516661 PHF23Q9BUL5 403 aaPredicted RBP26.01■■□□□ 1.75
RNU6-551P-201ENST00000516661 SENP3Q9H4L4 574 aaPredicted RBP25.27■■□□□ 1.64
RNU6-551P-201ENST00000516661 PLPPR3Q6T4P5 718 aa24.25■■□□□ 1.47
RNU6-551P-201ENST00000516661 FOXD1Q16676 465 aa23.35■■□□□ 1.33
RNU6-551P-201ENST00000516661 ADRA2BP18089 450 aa22.82■■□□□ 1.24
RNU6-551P-201ENST00000516661 PPP6R1Q9UPN7 881 aa22.8■■□□□ 1.24
RNU6-551P-201ENST00000516661 PIAS4Q8N2W9 510 aaPredicted RBP22.16■■□□□ 1.14
RNU6-551P-201ENST00000516661 MSH5O43196 834 aa21.41■■□□□ 1.02
RNU6-551P-201ENST00000516661 PPP4R3CPQ6ZMV5 832 aa21.4■■□□□ 1.02
RNU6-551P-201ENST00000516661 KCNA4P22459 653 aa21.39■■□□□ 1.01
RNU6-551P-201ENST00000516661 NCBP3Q53F19 620 aaKnown RBP21.02■□□□□ 0.96
RNU6-551P-201ENST00000516661 SCAF1Q9H7N4 1312 aaKnown RBP20.97■□□□□ 0.95
RNU6-551P-201ENST00000516661 CNKSR2Q8WXI2 1034 aa20.73■□□□□ 0.91
RNU6-551P-201ENST00000516661 NPM3O75607 178 aaKnown RBP20.64■□□□□ 0.89
RNU6-551P-201ENST00000516661 MAPK8IP2Q13387 824 aaPredicted RBP20.56■□□□□ 0.88
RNU6-551P-201ENST00000516661 SLC4A1APQ9BWU0 796 aaKnown RBP20.49■□□□□ 0.87
RNU6-551P-201ENST00000516661 EHMT2Q96KQ7 1210 aa20.4■□□□□ 0.86
RNU6-551P-201ENST00000516661 DMRT2Q9Y5R5 561 aa20.22■□□□□ 0.83
RNU6-551P-201ENST00000516661 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
RNU6-551P-201ENST00000516661 DNAJC5BQ9UF47 199 aa20.01■□□□□ 0.79
RNU6-551P-201ENST00000516661 HOXD11P31277 338 aaPredicted RBP19.99■□□□□ 0.79
RNU6-551P-201ENST00000516661 CSRNP3Q8WYN3 585 aa19.95■□□□□ 0.78
RNU6-551P-201ENST00000516661 ZBTB22O15209 634 aa19.67■□□□□ 0.74
RNU6-551P-201ENST00000516661 FOXD4L1Q9NU39 408 aa19.59■□□□□ 0.73
RNU6-551P-201ENST00000516661 SLC4A2P04920 1241 aa19.37■□□□□ 0.69
RNU6-551P-201ENST00000516661 DCAF8L1A6NGE4 600 aa19.34■□□□□ 0.69
RNU6-551P-201ENST00000516661 MYCNP04198 464 aaPredicted RBP19.11■□□□□ 0.65
RNU6-551P-201ENST00000516661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.07■□□□□ 0.64
RNU6-551P-201ENST00000516661 ATXN8OSP0DMR3 200 aa18.9■□□□□ 0.62
RNU6-551P-201ENST00000516661 U3KPZ7 1027 aaPredicted RBP18.78■□□□□ 0.6
RNU6-551P-201ENST00000516661 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.77■□□□□ 0.6
RNU6-551P-201ENST00000516661 HNRNPUL2Q1KMD3 747 aaKnown RBP18.77■□□□□ 0.6
RNU6-551P-201ENST00000516661 SAMD1Q6SPF0 538 aaPredicted RBP18.7■□□□□ 0.58
RNU6-551P-201ENST00000516661 POTEDQ86YR6 584 aa18.65■□□□□ 0.58
RNU6-551P-201ENST00000516661 ATF5Q9Y2D1 282 aaPredicted RBP18.5■□□□□ 0.55
RNU6-551P-201ENST00000516661 APLP2Q06481 763 aa18.48■□□□□ 0.55
RNU6-551P-201ENST00000516661 RNF39Q9H2S5 420 aa18.36■□□□□ 0.53
RNU6-551P-201ENST00000516661 ZNF219Q9P2Y4 722 aaPredicted RBP18.21■□□□□ 0.51
RNU6-551P-201ENST00000516661 C1QBPQ07021 282 aaKnown RBP18.18■□□□□ 0.5
RNU6-551P-201ENST00000516661 SPINK5Q9NQ38 1064 aaPredicted RBP18.1■□□□□ 0.49
RNU6-551P-201ENST00000516661 TRHP20396 242 aaPredicted RBP18.07■□□□□ 0.48
RNU6-551P-201ENST00000516661 CAPN15O75808 1086 aa18.05■□□□□ 0.48
RNU6-551P-201ENST00000516661 FKBP8Q14318 412 aa18.03■□□□□ 0.48
RNU6-551P-201ENST00000516661 POLA2Q14181 598 aa17.88■□□□□ 0.45
RNU6-551P-201ENST00000516661 FBLN2P98095 1184 aa17.78■□□□□ 0.44
RNU6-551P-201ENST00000516661 ABCB7O75027 752 aa17.72■□□□□ 0.43
RNU6-551P-201ENST00000516661 MKRN4PQ13434 485 aaPredicted RBP17.72■□□□□ 0.43
RNU6-551P-201ENST00000516661 ZBTB12Q9Y330 459 aaPredicted RBP17.67■□□□□ 0.42
RNU6-551P-201ENST00000516661 DSG3P32926 999 aa17.62■□□□□ 0.41
RNU6-551P-201ENST00000516661 SPDYE4A6NLX3 237 aa17.6■□□□□ 0.41
RNU6-551P-201ENST00000516661 CACNB1Q02641 598 aaPredicted RBP17.57■□□□□ 0.4
RNU6-551P-201ENST00000516661 PROM2Q8N271 834 aa17.35■□□□□ 0.37
RNU6-551P-201ENST00000516661 FBXO3Q9UK99 471 aa17.32■□□□□ 0.36
RNU6-551P-201ENST00000516661 AMER1Q5JTC6 1135 aaPredicted RBP17.26■□□□□ 0.35
RNU6-551P-201ENST00000516661 OSCARQ8IYS5 282 aa17.24■□□□□ 0.35
RNU6-551P-201ENST00000516661 SPDYE2BA6NHP3 402 aa17.2■□□□□ 0.34
RNU6-551P-201ENST00000516661 SPDYE6P0CI01 402 aa17.2■□□□□ 0.34
RNU6-551P-201ENST00000516661 SPDYE2Q495Y8 402 aa17.2■□□□□ 0.34
RNU6-551P-201ENST00000516661 ZNF692Q9BU19 519 aaPredicted RBP17.2■□□□□ 0.34
RNU6-551P-201ENST00000516661 RTN4Q9NQC3 1192 aaKnown RBP17.17■□□□□ 0.34
RNU6-551P-201ENST00000516661 SSUH2Q9Y2M2 353 aa17.09■□□□□ 0.33
RNU6-551P-201ENST00000516661 VASPP50552 380 aaPredicted RBP17.03■□□□□ 0.32
RNU6-551P-201ENST00000516661 PABPN1Q86U42 306 aaKnown RBP eCLIP16.98■□□□□ 0.31
RNU6-551P-201ENST00000516661 STAG3Q9UJ98 1225 aa16.88■□□□□ 0.29
RNU6-551P-201ENST00000516661 RBM42Q9BTD8 480 aaKnown RBP16.83■□□□□ 0.28
RNU6-551P-201ENST00000516661 IFNLR1Q8IU57 520 aaPredicted RBP16.8■□□□□ 0.28
RNU6-551P-201ENST00000516661 AKT1S1Q96B36 256 aa16.7■□□□□ 0.26
RNU6-551P-201ENST00000516661 PLCD3Q8N3E9 789 aa16.68■□□□□ 0.26
RNU6-551P-201ENST00000516661 KLHL34Q8N239 644 aa16.66■□□□□ 0.26
RNU6-551P-201ENST00000516661 MIER1Q8N108 512 aa16.64■□□□□ 0.25
RNU6-551P-201ENST00000516661 SPDYE1Q8NFV5 336 aaPredicted RBP16.59■□□□□ 0.25
RNU6-551P-201ENST00000516661 PLEKHG5O94827 1062 aa16.58■□□□□ 0.24
RNU6-551P-201ENST00000516661 SPOCK2Q92563 424 aa16.58■□□□□ 0.24
RNU6-551P-201ENST00000516661 REM2Q8IYK8 340 aaPredicted RBP16.52■□□□□ 0.24
RNU6-551P-201ENST00000516661 ZBTB47Q9UFB7 747 aaPredicted RBP16.5■□□□□ 0.23
RNU6-551P-201ENST00000516661 CLEC11AQ9Y240 323 aa16.47■□□□□ 0.23
RNU6-551P-201ENST00000516661 PRR29P0C7W0 189 aa16.41■□□□□ 0.22
RNU6-551P-201ENST00000516661 PKD2Q13563 968 aa16.41■□□□□ 0.22
RNU6-551P-201ENST00000516661 PITPNM1O00562 1244 aa16.32■□□□□ 0.2
RNU6-551P-201ENST00000516661 SLC24A1O60721 1099 aa16.29■□□□□ 0.2
RNU6-551P-201ENST00000516661 ECM2O94769 699 aaPredicted RBP16.27■□□□□ 0.2
RNU6-551P-201ENST00000516661 DCAF8L2P0C7V8 631 aa16.27■□□□□ 0.2
RNU6-551P-201ENST00000516661 CREBZFQ9NS37 354 aa16.27■□□□□ 0.2
RNU6-551P-201ENST00000516661 CIZ1Q9ULV3 898 aaPredicted RBP16.23■□□□□ 0.19
RNU6-551P-201ENST00000516661 MNX1P50219 401 aaPredicted RBP16.14■□□□□ 0.17
RNU6-551P-201ENST00000516661 NUBP1P53384 320 aa16.14■□□□□ 0.17
RNU6-551P-201ENST00000516661 GSE1Q14687 1217 aa16.14■□□□□ 0.17
RNU6-551P-201ENST00000516661 TRIM41Q8WV44 630 aa16.13■□□□□ 0.17
RNU6-551P-201ENST00000516661 NPM1P06748 294 aaKnown RBP eCLIP16.07■□□□□ 0.16
RNU6-551P-201ENST00000516661 DCAF8Q5TAQ9 597 aa16.07■□□□□ 0.16
RNU6-551P-201ENST00000516661 RGL2O15211 777 aa16.06■□□□□ 0.16
RNU6-551P-201ENST00000516661 FAM212AQ96EL1 285 aa16.05■□□□□ 0.16
RNU6-551P-201ENST00000516661 CHADLQ6NUI6 762 aa16■□□□□ 0.15
RNU6-551P-201ENST00000516661 RASEFQ8IZ41 740 aa15.97■□□□□ 0.15
RNU6-551P-201ENST00000516661 PLCB2Q00722 1185 aa15.95■□□□□ 0.14
RNU6-551P-201ENST00000516661 FXR2P51116 673 aaKnown RBP eCLIP15.93■□□□□ 0.14
RNU6-551P-201ENST00000516661 PRKAR2AP13861 404 aaKnown RBP15.92■□□□□ 0.14
RNU6-551P-201ENST00000516661 CHRDL2Q6WN34 429 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms