RNA–Protein interactions for RNA: ENST00000516384.1

SCARNA15.1-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 125 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.1-201ENST00000516384 AEBP2Q6ZN18 517 aaPredicted RBP26.41■■□□□ 1.82
SCARNA15.1-201ENST00000516384 CHIC1Q5VXU3 224 aa24.78■■□□□ 1.56
SCARNA15.1-201ENST00000516384 SENP3Q9H4L4 574 aaPredicted RBP22.68■■□□□ 1.22
SCARNA15.1-201ENST00000516384 PHF23Q9BUL5 403 aaPredicted RBP22.3■■□□□ 1.16
SCARNA15.1-201ENST00000516384 FOXD1Q16676 465 aa21.14■□□□□ 0.97
SCARNA15.1-201ENST00000516384 POTEDQ86YR6 584 aa20.61■□□□□ 0.89
SCARNA15.1-201ENST00000516384 MSH5O43196 834 aa20.03■□□□□ 0.8
SCARNA15.1-201ENST00000516384 PIAS4Q8N2W9 510 aaPredicted RBP19.71■□□□□ 0.75
SCARNA15.1-201ENST00000516384 PLPPR3Q6T4P5 718 aa19.6■□□□□ 0.73
SCARNA15.1-201ENST00000516384 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
SCARNA15.1-201ENST00000516384 ADRA2BP18089 450 aa19.37■□□□□ 0.69
SCARNA15.1-201ENST00000516384 MAPK8IP2Q13387 824 aaPredicted RBP17.9■□□□□ 0.46
SCARNA15.1-201ENST00000516384 DMRT2Q9Y5R5 561 aa17.89■□□□□ 0.45
SCARNA15.1-201ENST00000516384 SCAF1Q9H7N4 1312 aaKnown RBP17.81■□□□□ 0.44
SCARNA15.1-201ENST00000516384 CACNB1Q02641 598 aaPredicted RBP17.57■□□□□ 0.4
SCARNA15.1-201ENST00000516384 DCAF8L1A6NGE4 600 aa17.27■□□□□ 0.36
SCARNA15.1-201ENST00000516384 PPP4R3CPQ6ZMV5 832 aa17.11■□□□□ 0.33
SCARNA15.1-201ENST00000516384 HOXD11P31277 338 aaPredicted RBP17.06■□□□□ 0.32
SCARNA15.1-201ENST00000516384 RNF39Q9H2S5 420 aa17.04■□□□□ 0.32
SCARNA15.1-201ENST00000516384 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
SCARNA15.1-201ENST00000516384 RNF216Q9NWF9 866 aaPredicted RBP16.83■□□□□ 0.28
SCARNA15.1-201ENST00000516384 C1QBPQ07021 282 aaKnown RBP16.75■□□□□ 0.27
SCARNA15.1-201ENST00000516384 DNAJC5BQ9UF47 199 aa16.55■□□□□ 0.24
SCARNA15.1-201ENST00000516384 NCBP3Q53F19 620 aaKnown RBP16.38■□□□□ 0.21
SCARNA15.1-201ENST00000516384 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.32■□□□□ 0.2
SCARNA15.1-201ENST00000516384 NPM3O75607 178 aaKnown RBP16.07■□□□□ 0.16
SCARNA15.1-201ENST00000516384 POTEHQ6S545 545 aa16.03■□□□□ 0.16
SCARNA15.1-201ENST00000516384 U3KPZ7 1027 aaPredicted RBP15.86■□□□□ 0.13
SCARNA15.1-201ENST00000516384 CAPN15O75808 1086 aa15.83■□□□□ 0.12
SCARNA15.1-201ENST00000516384 DSG3P32926 999 aa15.77■□□□□ 0.12
SCARNA15.1-201ENST00000516384 SPINK5Q9NQ38 1064 aaPredicted RBP15.77■□□□□ 0.12
SCARNA15.1-201ENST00000516384 APLP2Q06481 763 aa15.48■□□□□ 0.07
SCARNA15.1-201ENST00000516384 TRHP20396 242 aaPredicted RBP15.47■□□□□ 0.07
SCARNA15.1-201ENST00000516384 SLC4A2P04920 1241 aa15.43■□□□□ 0.06
SCARNA15.1-201ENST00000516384 ZNF219Q9P2Y4 722 aaPredicted RBP15.42■□□□□ 0.06
SCARNA15.1-201ENST00000516384 ABCB7O75027 752 aa15.4■□□□□ 0.06
SCARNA15.1-201ENST00000516384 KCNA4P22459 653 aa15.39■□□□□ 0.05
SCARNA15.1-201ENST00000516384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.35■□□□□ 0.05
SCARNA15.1-201ENST00000516384 HNRNPUL2Q1KMD3 747 aaKnown RBP15.35■□□□□ 0.05
SCARNA15.1-201ENST00000516384 SAMD1Q6SPF0 538 aaPredicted RBP15.22■□□□□ 0.03
SCARNA15.1-201ENST00000516384 RBM42Q9BTD8 480 aaKnown RBP15.13■□□□□ 0.01
SCARNA15.1-201ENST00000516384 CHRDL2Q6WN34 429 aa14.95□□□□□ -0.02
SCARNA15.1-201ENST00000516384 POLA2Q14181 598 aa14.93□□□□□ -0.02
SCARNA15.1-201ENST00000516384 MYCNP04198 464 aaPredicted RBP14.91□□□□□ -0.02
SCARNA15.1-201ENST00000516384 SP7Q8TDD2 431 aaPredicted RBP14.73□□□□□ -0.05
SCARNA15.1-201ENST00000516384 AKT1S1Q96B36 256 aa14.66□□□□□ -0.06
SCARNA15.1-201ENST00000516384 ZBTB12Q9Y330 459 aaPredicted RBP14.63□□□□□ -0.07
SCARNA15.1-201ENST00000516384 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
SCARNA15.1-201ENST00000516384 FOXD4L1Q9NU39 408 aa14.52□□□□□ -0.09
SCARNA15.1-201ENST00000516384 REM2Q8IYK8 340 aaPredicted RBP14.5□□□□□ -0.09
SCARNA15.1-201ENST00000516384 SLC4A1APQ9BWU0 796 aaKnown RBP14.48□□□□□ -0.09
SCARNA15.1-201ENST00000516384 OSCARQ8IYS5 282 aa14.46□□□□□ -0.09
SCARNA15.1-201ENST00000516384 PIP4P2Q8N4L2 257 aa14.46□□□□□ -0.09
SCARNA15.1-201ENST00000516384 HAX1O00165 279 aa14.37□□□□□ -0.11
SCARNA15.1-201ENST00000516384 PITPNM1O00562 1244 aa14.35□□□□□ -0.11
SCARNA15.1-201ENST00000516384 FXR2P51116 673 aaKnown RBP eCLIP14.3□□□□□ -0.12
SCARNA15.1-201ENST00000516384 EVX2Q03828 476 aa14.15□□□□□ -0.14
SCARNA15.1-201ENST00000516384 ATXN8OSP0DMR3 200 aa14.12□□□□□ -0.15
SCARNA15.1-201ENST00000516384 SPDYE2BA6NHP3 402 aa14.11□□□□□ -0.15
SCARNA15.1-201ENST00000516384 SPDYE6P0CI01 402 aa14.11□□□□□ -0.15
SCARNA15.1-201ENST00000516384 SPDYE2Q495Y8 402 aa14.11□□□□□ -0.15
SCARNA15.1-201ENST00000516384 FBLN2P98095 1184 aa14.1□□□□□ -0.15
SCARNA15.1-201ENST00000516384 ZBTB22O15209 634 aa14.09□□□□□ -0.15
SCARNA15.1-201ENST00000516384 PRKAR2AP13861 404 aaKnown RBP14.01□□□□□ -0.17
SCARNA15.1-201ENST00000516384 CLEC11AQ9Y240 323 aa14.01□□□□□ -0.17
SCARNA15.1-201ENST00000516384 SPDYE1Q8NFV5 336 aaPredicted RBP13.99□□□□□ -0.17
SCARNA15.1-201ENST00000516384 ZNF692Q9BU19 519 aaPredicted RBP13.9□□□□□ -0.18
SCARNA15.1-201ENST00000516384 C19orf67A6NJJ6 358 aa13.85□□□□□ -0.19
SCARNA15.1-201ENST00000516384 MKRN4PQ13434 485 aaPredicted RBP13.84□□□□□ -0.19
SCARNA15.1-201ENST00000516384 SSUH2Q9Y2M2 353 aa13.84□□□□□ -0.19
SCARNA15.1-201ENST00000516384 LHX8Q68G74 356 aa13.82□□□□□ -0.2
SCARNA15.1-201ENST00000516384 GABBR2O75899 941 aa13.8□□□□□ -0.2
SCARNA15.1-201ENST00000516384 CHADLQ6NUI6 762 aa13.74□□□□□ -0.21
SCARNA15.1-201ENST00000516384 PRR29P0C7W0 189 aa13.71□□□□□ -0.21
SCARNA15.1-201ENST00000516384 PABPN1Q86U42 306 aaKnown RBP eCLIP13.67□□□□□ -0.22
SCARNA15.1-201ENST00000516384 CD44P16070 742 aaKnown RBP13.54□□□□□ -0.24
SCARNA15.1-201ENST00000516384 POTEIP0CG38 1075 aa13.5□□□□□ -0.25
SCARNA15.1-201ENST00000516384 FARP1Q9Y4F1 1045 aaPredicted RBP13.49□□□□□ -0.25
SCARNA15.1-201ENST00000516384 CLCN6P51797 869 aa13.46□□□□□ -0.25
SCARNA15.1-201ENST00000516384 PLSCR2Q9NRY7 297 aa13.43□□□□□ -0.26
SCARNA15.1-201ENST00000516384 DCBLD2Q96PD2 775 aa13.38□□□□□ -0.27
SCARNA15.1-201ENST00000516384 ZRANB1Q9UGI0 708 aa13.3□□□□□ -0.28
SCARNA15.1-201ENST00000516384 ZNF579Q8NAF0 562 aaKnown RBP13.28□□□□□ -0.28
SCARNA15.1-201ENST00000516384 STAG3Q9UJ98 1225 aa13.23□□□□□ -0.29
SCARNA15.1-201ENST00000516384 CREBZFQ9NS37 354 aa13.2□□□□□ -0.3
SCARNA15.1-201ENST00000516384 GALR2O43603 387 aaPredicted RBP13.15□□□□□ -0.3
SCARNA15.1-201ENST00000516384 PAK3O75914 559 aaPredicted RBP13.14□□□□□ -0.31
SCARNA15.1-201ENST00000516384 OTUD5Q96G74 571 aa13.12□□□□□ -0.31
SCARNA15.1-201ENST00000516384 CSRNP3Q8WYN3 585 aa13.09□□□□□ -0.31
SCARNA15.1-201ENST00000516384 SPDYE4A6NLX3 237 aa13.04□□□□□ -0.32
SCARNA15.1-201ENST00000516384 POTEB2H3BUK9 544 aa13.04□□□□□ -0.32
SCARNA15.1-201ENST00000516384 NPM1P06748 294 aaKnown RBP eCLIP13.03□□□□□ -0.32
SCARNA15.1-201ENST00000516384 PHF12Q96QT6 1004 aa13.03□□□□□ -0.32
SCARNA15.1-201ENST00000516384 POTEMA6NI47 508 aa13.02□□□□□ -0.33
SCARNA15.1-201ENST00000516384 POTEGQ6S5H5 508 aa12.97□□□□□ -0.33
SCARNA15.1-201ENST00000516384 PELP1Q8IZL8 1130 aaKnown RBP12.9□□□□□ -0.34
SCARNA15.1-201ENST00000516384 MNX1P50219 401 aaPredicted RBP12.89□□□□□ -0.35
SCARNA15.1-201ENST00000516384 PCDH10Q9P2E7 1040 aa12.88□□□□□ -0.35
SCARNA15.1-201ENST00000516384 METRNQ9UJH8 293 aa12.86□□□□□ -0.35
SCARNA15.1-201ENST00000516384 MS4A3Q96HJ5 214 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms