RNA–Protein interactions for RNA: ENST00000516272.1

RNU6-277P-201, Transcript of RNA, U6 small nuclear 277, pseudogene, humanhuman

BASIC

Gene RNU6-277P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-277P-201ENST00000516272 AEBP2Q6ZN18 517 aaPredicted RBP21.67■■□□□ 1.06
RNU6-277P-201ENST00000516272 CHIC1Q5VXU3 224 aa20.63■□□□□ 0.89
RNU6-277P-201ENST00000516272 SENP3Q9H4L4 574 aaPredicted RBP18.53■□□□□ 0.56
RNU6-277P-201ENST00000516272 PHF23Q9BUL5 403 aaPredicted RBP18.29■□□□□ 0.52
RNU6-277P-201ENST00000516272 FOXD1Q16676 465 aa17.24■□□□□ 0.35
RNU6-277P-201ENST00000516272 PLPPR3Q6T4P5 718 aa16.54■□□□□ 0.24
RNU6-277P-201ENST00000516272 PIAS4Q8N2W9 510 aaPredicted RBP16.18■□□□□ 0.18
RNU6-277P-201ENST00000516272 MSH5O43196 834 aa16.15■□□□□ 0.18
RNU6-277P-201ENST00000516272 PPP6R1Q9UPN7 881 aa16.14■□□□□ 0.17
RNU6-277P-201ENST00000516272 ADRA2BP18089 450 aa16.13■□□□□ 0.17
RNU6-277P-201ENST00000516272 POTEDQ86YR6 584 aa15.68■□□□□ 0.1
RNU6-277P-201ENST00000516272 MAPK8IP2Q13387 824 aaPredicted RBP14.8□□□□□ -0.04
RNU6-277P-201ENST00000516272 SCAF1Q9H7N4 1312 aaKnown RBP14.79□□□□□ -0.04
RNU6-277P-201ENST00000516272 DMRT2Q9Y5R5 561 aa14.67□□□□□ -0.06
RNU6-277P-201ENST00000516272 PPP4R3CPQ6ZMV5 832 aa14.51□□□□□ -0.09
RNU6-277P-201ENST00000516272 DCAF8L1A6NGE4 600 aa14.22□□□□□ -0.13
RNU6-277P-201ENST00000516272 CNKSR2Q8WXI2 1034 aa14.21□□□□□ -0.13
RNU6-277P-201ENST00000516272 HOXD11P31277 338 aaPredicted RBP14.12□□□□□ -0.15
RNU6-277P-201ENST00000516272 RNF216Q9NWF9 866 aaPredicted RBP14.06□□□□□ -0.16
RNU6-277P-201ENST00000516272 NCBP3Q53F19 620 aaKnown RBP14□□□□□ -0.17
RNU6-277P-201ENST00000516272 CACNB1Q02641 598 aaPredicted RBP13.89□□□□□ -0.19
RNU6-277P-201ENST00000516272 RNF39Q9H2S5 420 aa13.75□□□□□ -0.21
RNU6-277P-201ENST00000516272 NPM3O75607 178 aaKnown RBP13.74□□□□□ -0.21
RNU6-277P-201ENST00000516272 DNAJC5BQ9UF47 199 aa13.59□□□□□ -0.23
RNU6-277P-201ENST00000516272 C1QBPQ07021 282 aaKnown RBP13.57□□□□□ -0.24
RNU6-277P-201ENST00000516272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.57□□□□□ -0.24
RNU6-277P-201ENST00000516272 KCNA4P22459 653 aa13.53□□□□□ -0.24
RNU6-277P-201ENST00000516272 U3KPZ7 1027 aaPredicted RBP13.21□□□□□ -0.29
RNU6-277P-201ENST00000516272 SLC4A2P04920 1241 aa13.08□□□□□ -0.32
RNU6-277P-201ENST00000516272 CAPN15O75808 1086 aa13.07□□□□□ -0.32
RNU6-277P-201ENST00000516272 SPINK5Q9NQ38 1064 aaPredicted RBP13.04□□□□□ -0.32
RNU6-277P-201ENST00000516272 APLP2Q06481 763 aa12.92□□□□□ -0.34
RNU6-277P-201ENST00000516272 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
RNU6-277P-201ENST00000516272 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
RNU6-277P-201ENST00000516272 DSG3P32926 999 aa12.9□□□□□ -0.34
RNU6-277P-201ENST00000516272 TRHP20396 242 aaPredicted RBP12.88□□□□□ -0.35
RNU6-277P-201ENST00000516272 SAMD1Q6SPF0 538 aaPredicted RBP12.82□□□□□ -0.36
RNU6-277P-201ENST00000516272 SLC4A1APQ9BWU0 796 aaKnown RBP12.81□□□□□ -0.36
RNU6-277P-201ENST00000516272 ZNF219Q9P2Y4 722 aaPredicted RBP12.81□□□□□ -0.36
RNU6-277P-201ENST00000516272 ABCB7O75027 752 aa12.76□□□□□ -0.37
RNU6-277P-201ENST00000516272 MYCNP04198 464 aaPredicted RBP12.73□□□□□ -0.37
RNU6-277P-201ENST00000516272 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
RNU6-277P-201ENST00000516272 POLA2Q14181 598 aa12.5□□□□□ -0.41
RNU6-277P-201ENST00000516272 ZBTB22O15209 634 aa12.4□□□□□ -0.42
RNU6-277P-201ENST00000516272 ATF5Q9Y2D1 282 aaPredicted RBP12.4□□□□□ -0.42
RNU6-277P-201ENST00000516272 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
RNU6-277P-201ENST00000516272 POTEHQ6S545 545 aa12.31□□□□□ -0.44
RNU6-277P-201ENST00000516272 ZBTB12Q9Y330 459 aaPredicted RBP12.25□□□□□ -0.45
RNU6-277P-201ENST00000516272 ATXN8OSP0DMR3 200 aa12.19□□□□□ -0.46
RNU6-277P-201ENST00000516272 OSCARQ8IYS5 282 aa12.1□□□□□ -0.47
RNU6-277P-201ENST00000516272 CHRDL2Q6WN34 429 aa12.06□□□□□ -0.48
RNU6-277P-201ENST00000516272 AKT1S1Q96B36 256 aa12.05□□□□□ -0.48
RNU6-277P-201ENST00000516272 FBLN2P98095 1184 aa12□□□□□ -0.49
RNU6-277P-201ENST00000516272 REM2Q8IYK8 340 aaPredicted RBP11.95□□□□□ -0.5
RNU6-277P-201ENST00000516272 CSRNP3Q8WYN3 585 aa11.88□□□□□ -0.51
RNU6-277P-201ENST00000516272 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
RNU6-277P-201ENST00000516272 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
RNU6-277P-201ENST00000516272 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
RNU6-277P-201ENST00000516272 EHMT2Q96KQ7 1210 aa11.85□□□□□ -0.51
RNU6-277P-201ENST00000516272 PITPNM1O00562 1244 aa11.82□□□□□ -0.52
RNU6-277P-201ENST00000516272 MKRN4PQ13434 485 aaPredicted RBP11.82□□□□□ -0.52
RNU6-277P-201ENST00000516272 PIP4P2Q8N4L2 257 aa11.77□□□□□ -0.53
RNU6-277P-201ENST00000516272 ZNF692Q9BU19 519 aaPredicted RBP11.76□□□□□ -0.53
RNU6-277P-201ENST00000516272 CLEC11AQ9Y240 323 aa11.7□□□□□ -0.54
RNU6-277P-201ENST00000516272 FXR2P51116 673 aaKnown RBP eCLIP11.67□□□□□ -0.54
RNU6-277P-201ENST00000516272 SPDYE1Q8NFV5 336 aaPredicted RBP11.66□□□□□ -0.54
RNU6-277P-201ENST00000516272 SSUH2Q9Y2M2 353 aa11.66□□□□□ -0.54
RNU6-277P-201ENST00000516272 HAX1O00165 279 aa11.61□□□□□ -0.55
RNU6-277P-201ENST00000516272 PABPN1Q86U42 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
RNU6-277P-201ENST00000516272 SP7Q8TDD2 431 aaPredicted RBP11.56□□□□□ -0.56
RNU6-277P-201ENST00000516272 PRKAR2AP13861 404 aaKnown RBP11.54□□□□□ -0.56
RNU6-277P-201ENST00000516272 PRR29P0C7W0 189 aa11.48□□□□□ -0.57
RNU6-277P-201ENST00000516272 CHADLQ6NUI6 762 aa11.42□□□□□ -0.58
RNU6-277P-201ENST00000516272 EVX2Q03828 476 aa11.38□□□□□ -0.59
RNU6-277P-201ENST00000516272 SPDYE4A6NLX3 237 aa11.35□□□□□ -0.59
RNU6-277P-201ENST00000516272 C19orf67A6NJJ6 358 aa11.3□□□□□ -0.6
RNU6-277P-201ENST00000516272 STAG3Q9UJ98 1225 aa11.26□□□□□ -0.61
RNU6-277P-201ENST00000516272 FARP1Q9Y4F1 1045 aaPredicted RBP11.24□□□□□ -0.61
RNU6-277P-201ENST00000516272 CD44P16070 742 aaKnown RBP11.18□□□□□ -0.62
RNU6-277P-201ENST00000516272 GABBR2O75899 941 aa11.16□□□□□ -0.62
RNU6-277P-201ENST00000516272 CREBZFQ9NS37 354 aa11.14□□□□□ -0.63
RNU6-277P-201ENST00000516272 ZRANB1Q9UGI0 708 aa11.05□□□□□ -0.64
RNU6-277P-201ENST00000516272 PAK3O75914 559 aaPredicted RBP11□□□□□ -0.65
RNU6-277P-201ENST00000516272 NPM1P06748 294 aaKnown RBP eCLIP11□□□□□ -0.65
RNU6-277P-201ENST00000516272 CLCN6P51797 869 aa10.97□□□□□ -0.65
RNU6-277P-201ENST00000516272 PROM2Q8N271 834 aa10.97□□□□□ -0.65
RNU6-277P-201ENST00000516272 ZNF579Q8NAF0 562 aaKnown RBP10.96□□□□□ -0.65
RNU6-277P-201ENST00000516272 DCBLD2Q96PD2 775 aa10.93□□□□□ -0.66
RNU6-277P-201ENST00000516272 MNX1P50219 401 aaPredicted RBP10.91□□□□□ -0.66
RNU6-277P-201ENST00000516272 PLEKHG5O94827 1062 aa10.89□□□□□ -0.67
RNU6-277P-201ENST00000516272 PHF12Q96QT6 1004 aa10.88□□□□□ -0.67
RNU6-277P-201ENST00000516272 POTEIP0CG38 1075 aa10.87□□□□□ -0.67
RNU6-277P-201ENST00000516272 LHX8Q68G74 356 aa10.86□□□□□ -0.67
RNU6-277P-201ENST00000516272 MIER1Q8N108 512 aa10.86□□□□□ -0.67
RNU6-277P-201ENST00000516272 GALR2O43603 387 aaPredicted RBP10.85□□□□□ -0.67
RNU6-277P-201ENST00000516272 FKBP8Q14318 412 aa10.85□□□□□ -0.67
RNU6-277P-201ENST00000516272 TSPYL2Q9H2G4 693 aaPredicted RBP10.82□□□□□ -0.68
RNU6-277P-201ENST00000516272 PLCD3Q8N3E9 789 aa10.8□□□□□ -0.68
RNU6-277P-201ENST00000516272 MS4A3Q96HJ5 214 aa10.72□□□□□ -0.69
RNU6-277P-201ENST00000516272 CCDC61Q9Y6R9 512 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms