RNA–Protein interactions for RNA: ENST00000516258.1

RNU4-71P-201, Transcript of RNA, U4 small nuclear 71, pseudogene, humanhuman

BASIC

Gene RNU4-71P, Length 113 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-71P-201ENST00000516258 AEBP2Q6ZN18 517 aaPredicted RBP18.42■□□□□ 0.54
RNU4-71P-201ENST00000516258 CHIC1Q5VXU3 224 aa17.21■□□□□ 0.35
RNU4-71P-201ENST00000516258 SENP3Q9H4L4 574 aaPredicted RBP15.63■□□□□ 0.09
RNU4-71P-201ENST00000516258 PHF23Q9BUL5 403 aaPredicted RBP15.44■□□□□ 0.06
RNU4-71P-201ENST00000516258 FOXD1Q16676 465 aa14.66□□□□□ -0.06
RNU4-71P-201ENST00000516258 POTEDQ86YR6 584 aa13.83□□□□□ -0.2
RNU4-71P-201ENST00000516258 MSH5O43196 834 aa13.71□□□□□ -0.21
RNU4-71P-201ENST00000516258 PLPPR3Q6T4P5 718 aa13.61□□□□□ -0.23
RNU4-71P-201ENST00000516258 PIAS4Q8N2W9 510 aaPredicted RBP13.61□□□□□ -0.23
RNU4-71P-201ENST00000516258 PPP6R1Q9UPN7 881 aa13.59□□□□□ -0.23
RNU4-71P-201ENST00000516258 ADRA2BP18089 450 aa13.51□□□□□ -0.25
RNU4-71P-201ENST00000516258 MAPK8IP2Q13387 824 aaPredicted RBP12.5□□□□□ -0.41
RNU4-71P-201ENST00000516258 DMRT2Q9Y5R5 561 aa12.39□□□□□ -0.43
RNU4-71P-201ENST00000516258 SCAF1Q9H7N4 1312 aaKnown RBP12.21□□□□□ -0.45
RNU4-71P-201ENST00000516258 PPP4R3CPQ6ZMV5 832 aa11.93□□□□□ -0.5
RNU4-71P-201ENST00000516258 CACNB1Q02641 598 aaPredicted RBP11.92□□□□□ -0.5
RNU4-71P-201ENST00000516258 DCAF8L1A6NGE4 600 aa11.87□□□□□ -0.51
RNU4-71P-201ENST00000516258 HOXD11P31277 338 aaPredicted RBP11.85□□□□□ -0.51
RNU4-71P-201ENST00000516258 RNF39Q9H2S5 420 aa11.75□□□□□ -0.53
RNU4-71P-201ENST00000516258 CNKSR2Q8WXI2 1034 aa11.73□□□□□ -0.53
RNU4-71P-201ENST00000516258 RNF216Q9NWF9 866 aaPredicted RBP11.68□□□□□ -0.54
RNU4-71P-201ENST00000516258 C1QBPQ07021 282 aaKnown RBP11.5□□□□□ -0.57
RNU4-71P-201ENST00000516258 DNAJC5BQ9UF47 199 aa11.43□□□□□ -0.58
RNU4-71P-201ENST00000516258 NCBP3Q53F19 620 aaKnown RBP11.33□□□□□ -0.6
RNU4-71P-201ENST00000516258 NPM3O75607 178 aaKnown RBP11.27□□□□□ -0.61
RNU4-71P-201ENST00000516258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.25□□□□□ -0.61
RNU4-71P-201ENST00000516258 U3KPZ7 1027 aaPredicted RBP11.06□□□□□ -0.64
RNU4-71P-201ENST00000516258 SPINK5Q9NQ38 1064 aaPredicted RBP10.99□□□□□ -0.65
RNU4-71P-201ENST00000516258 DSG3P32926 999 aa10.93□□□□□ -0.66
RNU4-71P-201ENST00000516258 CAPN15O75808 1086 aa10.9□□□□□ -0.66
RNU4-71P-201ENST00000516258 KCNA4P22459 653 aa10.89□□□□□ -0.67
RNU4-71P-201ENST00000516258 SLC4A2P04920 1241 aa10.85□□□□□ -0.67
RNU4-71P-201ENST00000516258 POTEHQ6S545 545 aa10.77□□□□□ -0.69
RNU4-71P-201ENST00000516258 TRHP20396 242 aaPredicted RBP10.69□□□□□ -0.7
RNU4-71P-201ENST00000516258 ABCB7O75027 752 aa10.68□□□□□ -0.7
RNU4-71P-201ENST00000516258 ZNF219Q9P2Y4 722 aaPredicted RBP10.62□□□□□ -0.71
RNU4-71P-201ENST00000516258 APLP2Q06481 763 aa10.56□□□□□ -0.72
RNU4-71P-201ENST00000516258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.54□□□□□ -0.72
RNU4-71P-201ENST00000516258 HNRNPUL2Q1KMD3 747 aaKnown RBP10.54□□□□□ -0.72
RNU4-71P-201ENST00000516258 SAMD1Q6SPF0 538 aaPredicted RBP10.5□□□□□ -0.73
RNU4-71P-201ENST00000516258 MYCNP04198 464 aaPredicted RBP10.38□□□□□ -0.75
RNU4-71P-201ENST00000516258 POLA2Q14181 598 aa10.36□□□□□ -0.75
RNU4-71P-201ENST00000516258 RBM42Q9BTD8 480 aaKnown RBP10.34□□□□□ -0.75
RNU4-71P-201ENST00000516258 CHRDL2Q6WN34 429 aa10.27□□□□□ -0.77
RNU4-71P-201ENST00000516258 ATF5Q9Y2D1 282 aaPredicted RBP10.27□□□□□ -0.77
RNU4-71P-201ENST00000516258 SLC4A1APQ9BWU0 796 aaKnown RBP10.18□□□□□ -0.78
RNU4-71P-201ENST00000516258 FOXD4L1Q9NU39 408 aa10.16□□□□□ -0.78
RNU4-71P-201ENST00000516258 AKT1S1Q96B36 256 aa10.1□□□□□ -0.79
RNU4-71P-201ENST00000516258 OSCARQ8IYS5 282 aa10.07□□□□□ -0.8
RNU4-71P-201ENST00000516258 ZBTB22O15209 634 aa10.06□□□□□ -0.8
RNU4-71P-201ENST00000516258 ZBTB12Q9Y330 459 aaPredicted RBP10.05□□□□□ -0.8
RNU4-71P-201ENST00000516258 REM2Q8IYK8 340 aaPredicted RBP10.04□□□□□ -0.8
RNU4-71P-201ENST00000516258 PIP4P2Q8N4L2 257 aa10□□□□□ -0.81
RNU4-71P-201ENST00000516258 SP7Q8TDD2 431 aaPredicted RBP9.99□□□□□ -0.81
RNU4-71P-201ENST00000516258 PITPNM1O00562 1244 aa9.96□□□□□ -0.82
RNU4-71P-201ENST00000516258 FXR2P51116 673 aaKnown RBP eCLIP9.89□□□□□ -0.83
RNU4-71P-201ENST00000516258 ATXN8OSP0DMR3 200 aa9.84□□□□□ -0.83
RNU4-71P-201ENST00000516258 HAX1O00165 279 aa9.83□□□□□ -0.84
RNU4-71P-201ENST00000516258 EVX2Q03828 476 aa9.8□□□□□ -0.84
RNU4-71P-201ENST00000516258 SPDYE2BA6NHP3 402 aa9.77□□□□□ -0.85
RNU4-71P-201ENST00000516258 SPDYE6P0CI01 402 aa9.77□□□□□ -0.85
RNU4-71P-201ENST00000516258 SPDYE2Q495Y8 402 aa9.77□□□□□ -0.85
RNU4-71P-201ENST00000516258 MKRN4PQ13434 485 aaPredicted RBP9.76□□□□□ -0.85
RNU4-71P-201ENST00000516258 FBLN2P98095 1184 aa9.73□□□□□ -0.85
RNU4-71P-201ENST00000516258 PRKAR2AP13861 404 aaKnown RBP9.67□□□□□ -0.86
RNU4-71P-201ENST00000516258 CLEC11AQ9Y240 323 aa9.66□□□□□ -0.86
RNU4-71P-201ENST00000516258 SSUH2Q9Y2M2 353 aa9.66□□□□□ -0.86
RNU4-71P-201ENST00000516258 SPDYE1Q8NFV5 336 aaPredicted RBP9.63□□□□□ -0.87
RNU4-71P-201ENST00000516258 ZNF692Q9BU19 519 aaPredicted RBP9.63□□□□□ -0.87
RNU4-71P-201ENST00000516258 C19orf67A6NJJ6 358 aa9.59□□□□□ -0.87
RNU4-71P-201ENST00000516258 CHADLQ6NUI6 762 aa9.56□□□□□ -0.88
RNU4-71P-201ENST00000516258 GABBR2O75899 941 aa9.5□□□□□ -0.89
RNU4-71P-201ENST00000516258 PABPN1Q86U42 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
RNU4-71P-201ENST00000516258 PRR29P0C7W0 189 aa9.45□□□□□ -0.9
RNU4-71P-201ENST00000516258 POTEIP0CG38 1075 aa9.36□□□□□ -0.91
RNU4-71P-201ENST00000516258 LHX8Q68G74 356 aa9.36□□□□□ -0.91
RNU4-71P-201ENST00000516258 CSRNP3Q8WYN3 585 aa9.35□□□□□ -0.91
RNU4-71P-201ENST00000516258 FARP1Q9Y4F1 1045 aaPredicted RBP9.35□□□□□ -0.91
RNU4-71P-201ENST00000516258 CD44P16070 742 aaKnown RBP9.34□□□□□ -0.91
RNU4-71P-201ENST00000516258 CREBZFQ9NS37 354 aa9.23□□□□□ -0.93
RNU4-71P-201ENST00000516258 ZNF579Q8NAF0 562 aaKnown RBP9.19□□□□□ -0.94
RNU4-71P-201ENST00000516258 ZRANB1Q9UGI0 708 aa9.17□□□□□ -0.94
RNU4-71P-201ENST00000516258 CLCN6P51797 869 aa9.16□□□□□ -0.94
RNU4-71P-201ENST00000516258 GALR2O43603 387 aaPredicted RBP9.14□□□□□ -0.95
RNU4-71P-201ENST00000516258 DCBLD2Q96PD2 775 aa9.14□□□□□ -0.95
RNU4-71P-201ENST00000516258 SPDYE4A6NLX3 237 aa9.12□□□□□ -0.95
RNU4-71P-201ENST00000516258 EHMT2Q96KQ7 1210 aa9.11□□□□□ -0.95
RNU4-71P-201ENST00000516258 STAG3Q9UJ98 1225 aa9.11□□□□□ -0.95
RNU4-71P-201ENST00000516258 PHF12Q96QT6 1004 aa9.08□□□□□ -0.96
RNU4-71P-201ENST00000516258 MNX1P50219 401 aaPredicted RBP9.07□□□□□ -0.96
RNU4-71P-201ENST00000516258 POTEB2H3BUK9 544 aa9.05□□□□□ -0.96
RNU4-71P-201ENST00000516258 OTUD5Q96G74 571 aa9.02□□□□□ -0.97
RNU4-71P-201ENST00000516258 PELP1Q8IZL8 1130 aaKnown RBP9.01□□□□□ -0.97
RNU4-71P-201ENST00000516258 PAK3O75914 559 aaPredicted RBP8.98□□□□□ -0.97
RNU4-71P-201ENST00000516258 NPM1P06748 294 aaKnown RBP eCLIP8.95□□□□□ -0.98
RNU4-71P-201ENST00000516258 MS4A3Q96HJ5 214 aa8.94□□□□□ -0.98
RNU4-71P-201ENST00000516258 PLSCR2Q9NRY7 297 aa8.93□□□□□ -0.98
RNU4-71P-201ENST00000516258 PROM2Q8N271 834 aa8.91□□□□□ -0.98
RNU4-71P-201ENST00000516258 POTEJP0CG39 1038 aa8.9□□□□□ -0.98
RNU4-71P-201ENST00000516258 ASTLQ6HA08 431 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms