RNA–Protein interactions for RNA: ENST00000516254.1

RNU6-1041P-201, Transcript of RNA, U6 small nuclear 1041, pseudogene, humanhuman

BASIC

Gene RNU6-1041P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1041P-201ENST00000516254 CHIC1Q5VXU3 224 aa8.86□□□□□ -0.99
RNU6-1041P-201ENST00000516254 AEBP2Q6ZN18 517 aaPredicted RBP8.85□□□□□ -0.99
RNU6-1041P-201ENST00000516254 PHF23Q9BUL5 403 aaPredicted RBP7.74□□□□□ -1.17
RNU6-1041P-201ENST00000516254 SENP3Q9H4L4 574 aaPredicted RBP7.61□□□□□ -1.19
RNU6-1041P-201ENST00000516254 POTEDQ86YR6 584 aa7.42□□□□□ -1.22
RNU6-1041P-201ENST00000516254 PLPPR3Q6T4P5 718 aa7.3□□□□□ -1.24
RNU6-1041P-201ENST00000516254 FOXD1Q16676 465 aa6.96□□□□□ -1.3
RNU6-1041P-201ENST00000516254 ADRA2BP18089 450 aa6.78□□□□□ -1.32
RNU6-1041P-201ENST00000516254 PPP6R1Q9UPN7 881 aa6.77□□□□□ -1.33
RNU6-1041P-201ENST00000516254 PIAS4Q8N2W9 510 aaPredicted RBP6.62□□□□□ -1.35
RNU6-1041P-201ENST00000516254 MSH5O43196 834 aa6.51□□□□□ -1.37
RNU6-1041P-201ENST00000516254 PPP4R3CPQ6ZMV5 832 aa6.4□□□□□ -1.38
RNU6-1041P-201ENST00000516254 KCNA4P22459 653 aa6.37□□□□□ -1.39
RNU6-1041P-201ENST00000516254 SCAF1Q9H7N4 1312 aaKnown RBP6.36□□□□□ -1.39
RNU6-1041P-201ENST00000516254 NCBP3Q53F19 620 aaKnown RBP6.36□□□□□ -1.39
RNU6-1041P-201ENST00000516254 CNKSR2Q8WXI2 1034 aa6.23□□□□□ -1.41
RNU6-1041P-201ENST00000516254 NPM3O75607 178 aaKnown RBP6.17□□□□□ -1.42
RNU6-1041P-201ENST00000516254 SLC4A1APQ9BWU0 796 aaKnown RBP6.13□□□□□ -1.43
RNU6-1041P-201ENST00000516254 MAPK8IP2Q13387 824 aaPredicted RBP6.09□□□□□ -1.43
RNU6-1041P-201ENST00000516254 RNF216Q9NWF9 866 aaPredicted RBP6.08□□□□□ -1.44
RNU6-1041P-201ENST00000516254 DNAJC5BQ9UF47 199 aa6.08□□□□□ -1.44
RNU6-1041P-201ENST00000516254 DMRT2Q9Y5R5 561 aa6.07□□□□□ -1.44
RNU6-1041P-201ENST00000516254 EHMT2Q96KQ7 1210 aa6.05□□□□□ -1.44
RNU6-1041P-201ENST00000516254 HOXD11P31277 338 aaPredicted RBP6□□□□□ -1.45
RNU6-1041P-201ENST00000516254 CACNB1Q02641 598 aaPredicted RBP5.99□□□□□ -1.45
RNU6-1041P-201ENST00000516254 CSRNP3Q8WYN3 585 aa5.94□□□□□ -1.46
RNU6-1041P-201ENST00000516254 FOXD4L1Q9NU39 408 aa5.88□□□□□ -1.47
RNU6-1041P-201ENST00000516254 ZBTB22O15209 634 aa5.82□□□□□ -1.48
RNU6-1041P-201ENST00000516254 SLC4A2P04920 1241 aa5.77□□□□□ -1.49
RNU6-1041P-201ENST00000516254 DCAF8L1A6NGE4 600 aa5.76□□□□□ -1.49
RNU6-1041P-201ENST00000516254 MYCNP04198 464 aaPredicted RBP5.75□□□□□ -1.49
RNU6-1041P-201ENST00000516254 ATXN8OSP0DMR3 200 aa5.73□□□□□ -1.49
RNU6-1041P-201ENST00000516254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.72□□□□□ -1.49
RNU6-1041P-201ENST00000516254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.71□□□□□ -1.5
RNU6-1041P-201ENST00000516254 HNRNPUL2Q1KMD3 747 aaKnown RBP5.71□□□□□ -1.5
RNU6-1041P-201ENST00000516254 POTEHQ6S545 545 aa5.71□□□□□ -1.5
RNU6-1041P-201ENST00000516254 SAMD1Q6SPF0 538 aaPredicted RBP5.66□□□□□ -1.5
RNU6-1041P-201ENST00000516254 APLP2Q06481 763 aa5.64□□□□□ -1.51
RNU6-1041P-201ENST00000516254 U3KPZ7 1027 aaPredicted RBP5.6□□□□□ -1.51
RNU6-1041P-201ENST00000516254 C1QBPQ07021 282 aaKnown RBP5.5□□□□□ -1.53
RNU6-1041P-201ENST00000516254 RNF39Q9H2S5 420 aa5.5□□□□□ -1.53
RNU6-1041P-201ENST00000516254 ZNF219Q9P2Y4 722 aaPredicted RBP5.47□□□□□ -1.53
RNU6-1041P-201ENST00000516254 ATF5Q9Y2D1 282 aaPredicted RBP5.47□□□□□ -1.53
RNU6-1041P-201ENST00000516254 CAPN15O75808 1086 aa5.39□□□□□ -1.55
RNU6-1041P-201ENST00000516254 TRHP20396 242 aaPredicted RBP5.38□□□□□ -1.55
RNU6-1041P-201ENST00000516254 FKBP8Q14318 412 aa5.38□□□□□ -1.55
RNU6-1041P-201ENST00000516254 FBLN2P98095 1184 aa5.37□□□□□ -1.55
RNU6-1041P-201ENST00000516254 SPINK5Q9NQ38 1064 aaPredicted RBP5.37□□□□□ -1.55
RNU6-1041P-201ENST00000516254 ZBTB12Q9Y330 459 aaPredicted RBP5.37□□□□□ -1.55
RNU6-1041P-201ENST00000516254 POLA2Q14181 598 aa5.34□□□□□ -1.55
RNU6-1041P-201ENST00000516254 SPDYE4A6NLX3 237 aa5.27□□□□□ -1.57
RNU6-1041P-201ENST00000516254 DSG3P32926 999 aa5.27□□□□□ -1.57
RNU6-1041P-201ENST00000516254 FBXO3Q9UK99 471 aa5.27□□□□□ -1.57
RNU6-1041P-201ENST00000516254 MKRN4PQ13434 485 aaPredicted RBP5.26□□□□□ -1.57
RNU6-1041P-201ENST00000516254 ABCB7O75027 752 aa5.25□□□□□ -1.57
RNU6-1041P-201ENST00000516254 AMER1Q5JTC6 1135 aaPredicted RBP5.22□□□□□ -1.57
RNU6-1041P-201ENST00000516254 PROM2Q8N271 834 aa5.22□□□□□ -1.57
RNU6-1041P-201ENST00000516254 SPDYE2BA6NHP3 402 aa5.2□□□□□ -1.58
RNU6-1041P-201ENST00000516254 SPDYE6P0CI01 402 aa5.2□□□□□ -1.58
RNU6-1041P-201ENST00000516254 SPDYE2Q495Y8 402 aa5.2□□□□□ -1.58
RNU6-1041P-201ENST00000516254 ZNF692Q9BU19 519 aaPredicted RBP5.16□□□□□ -1.58
RNU6-1041P-201ENST00000516254 OSCARQ8IYS5 282 aa5.13□□□□□ -1.59
RNU6-1041P-201ENST00000516254 STAG3Q9UJ98 1225 aa5.13□□□□□ -1.59
RNU6-1041P-201ENST00000516254 SSUH2Q9Y2M2 353 aa5.13□□□□□ -1.59
RNU6-1041P-201ENST00000516254 VASPP50552 380 aaPredicted RBP5.11□□□□□ -1.59
RNU6-1041P-201ENST00000516254 RBM42Q9BTD8 480 aaKnown RBP5.1□□□□□ -1.59
RNU6-1041P-201ENST00000516254 RTN4Q9NQC3 1192 aaKnown RBP5.1□□□□□ -1.59
RNU6-1041P-201ENST00000516254 PABPN1Q86U42 306 aaKnown RBP eCLIP5.07□□□□□ -1.6
RNU6-1041P-201ENST00000516254 PLEKHG5O94827 1062 aa5.05□□□□□ -1.6
RNU6-1041P-201ENST00000516254 SP7Q8TDD2 431 aaPredicted RBP5.04□□□□□ -1.6
RNU6-1041P-201ENST00000516254 AKT1S1Q96B36 256 aa5.04□□□□□ -1.6
RNU6-1041P-201ENST00000516254 PLSCR2Q9NRY7 297 aa5.03□□□□□ -1.6
RNU6-1041P-201ENST00000516254 ZBTB47Q9UFB7 747 aaPredicted RBP5.03□□□□□ -1.6
RNU6-1041P-201ENST00000516254 IFNLR1Q8IU57 520 aaPredicted RBP5.01□□□□□ -1.61
RNU6-1041P-201ENST00000516254 PLCD3Q8N3E9 789 aa5.01□□□□□ -1.61
RNU6-1041P-201ENST00000516254 SPDYE1Q8NFV5 336 aaPredicted RBP5.01□□□□□ -1.61
RNU6-1041P-201ENST00000516254 KLHL34Q8N239 644 aa5□□□□□ -1.61
RNU6-1041P-201ENST00000516254 MIER1Q8N108 512 aa4.99□□□□□ -1.61
RNU6-1041P-201ENST00000516254 SPOCK2Q92563 424 aa4.99□□□□□ -1.61
RNU6-1041P-201ENST00000516254 REM2Q8IYK8 340 aaPredicted RBP4.95□□□□□ -1.62
RNU6-1041P-201ENST00000516254 PRR29P0C7W0 189 aa4.93□□□□□ -1.62
RNU6-1041P-201ENST00000516254 TRIM41Q8WV44 630 aa4.92□□□□□ -1.62
RNU6-1041P-201ENST00000516254 CLEC11AQ9Y240 323 aa4.91□□□□□ -1.62
RNU6-1041P-201ENST00000516254 PKD2Q13563 968 aa4.89□□□□□ -1.63
RNU6-1041P-201ENST00000516254 SLC24A1O60721 1099 aa4.88□□□□□ -1.63
RNU6-1041P-201ENST00000516254 GSE1Q14687 1217 aa4.88□□□□□ -1.63
RNU6-1041P-201ENST00000516254 ECM2O94769 699 aaPredicted RBP4.87□□□□□ -1.63
RNU6-1041P-201ENST00000516254 NPM1P06748 294 aaKnown RBP eCLIP4.87□□□□□ -1.63
RNU6-1041P-201ENST00000516254 PITPNM1O00562 1244 aa4.86□□□□□ -1.63
RNU6-1041P-201ENST00000516254 CREBZFQ9NS37 354 aa4.86□□□□□ -1.63
RNU6-1041P-201ENST00000516254 TAOK2Q9UL54 1235 aa4.85□□□□□ -1.63
RNU6-1041P-201ENST00000516254 CIZ1Q9ULV3 898 aaPredicted RBP4.85□□□□□ -1.63
RNU6-1041P-201ENST00000516254 DCAF8L2P0C7V8 631 aa4.84□□□□□ -1.63
RNU6-1041P-201ENST00000516254 CHRDL2Q6WN34 429 aa4.84□□□□□ -1.63
RNU6-1041P-201ENST00000516254 FAM212AQ96EL1 285 aa4.84□□□□□ -1.63
RNU6-1041P-201ENST00000516254 MNX1P50219 401 aaPredicted RBP4.82□□□□□ -1.64
RNU6-1041P-201ENST00000516254 NUBP1P53384 320 aa4.82□□□□□ -1.64
RNU6-1041P-201ENST00000516254 DCAF8Q5TAQ9 597 aa4.81□□□□□ -1.64
RNU6-1041P-201ENST00000516254 CHRM1P11229 460 aaPredicted RBP4.8□□□□□ -1.64
RNU6-1041P-201ENST00000516254 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms