RNA–Protein interactions for RNA: ENST00000516165.1

SNORA19.3-201, Transcript of small nucleolar RNA, H/ACA box 19, humanhuman

BASIC

Gene SNORA19, Length 130 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA19.3-201ENST00000516165 AEBP2Q6ZN18 517 aaPredicted RBP24.99■■□□□ 1.59
SNORA19.3-201ENST00000516165 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
SNORA19.3-201ENST00000516165 PHF23Q9BUL5 403 aaPredicted RBP21.57■■□□□ 1.04
SNORA19.3-201ENST00000516165 SENP3Q9H4L4 574 aaPredicted RBP21.43■■□□□ 1.02
SNORA19.3-201ENST00000516165 PLPPR3Q6T4P5 718 aa20.15■□□□□ 0.82
SNORA19.3-201ENST00000516165 FOXD1Q16676 465 aa19.73■□□□□ 0.75
SNORA19.3-201ENST00000516165 ADRA2BP18089 450 aa19.01■□□□□ 0.63
SNORA19.3-201ENST00000516165 PPP6R1Q9UPN7 881 aa18.98■□□□□ 0.63
SNORA19.3-201ENST00000516165 PIAS4Q8N2W9 510 aaPredicted RBP18.7■□□□□ 0.58
SNORA19.3-201ENST00000516165 MSH5O43196 834 aa18.34■□□□□ 0.53
SNORA19.3-201ENST00000516165 PPP4R3CPQ6ZMV5 832 aa17.69■□□□□ 0.42
SNORA19.3-201ENST00000516165 SCAF1Q9H7N4 1312 aaKnown RBP17.68■□□□□ 0.42
SNORA19.3-201ENST00000516165 NCBP3Q53F19 620 aaKnown RBP17.42■□□□□ 0.38
SNORA19.3-201ENST00000516165 KCNA4P22459 653 aa17.3■□□□□ 0.36
SNORA19.3-201ENST00000516165 CNKSR2Q8WXI2 1034 aa17.25■□□□□ 0.35
SNORA19.3-201ENST00000516165 MAPK8IP2Q13387 824 aaPredicted RBP17.18■□□□□ 0.34
SNORA19.3-201ENST00000516165 DMRT2Q9Y5R5 561 aa17.06■□□□□ 0.32
SNORA19.3-201ENST00000516165 NPM3O75607 178 aaKnown RBP16.96■□□□□ 0.31
SNORA19.3-201ENST00000516165 RNF216Q9NWF9 866 aaPredicted RBP16.88■□□□□ 0.29
SNORA19.3-201ENST00000516165 HOXD11P31277 338 aaPredicted RBP16.75■□□□□ 0.27
SNORA19.3-201ENST00000516165 SLC4A1APQ9BWU0 796 aaKnown RBP16.6■□□□□ 0.25
SNORA19.3-201ENST00000516165 DNAJC5BQ9UF47 199 aa16.59■□□□□ 0.25
SNORA19.3-201ENST00000516165 POTEDQ86YR6 584 aa16.37■□□□□ 0.21
SNORA19.3-201ENST00000516165 DCAF8L1A6NGE4 600 aa16.33■□□□□ 0.2
SNORA19.3-201ENST00000516165 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
SNORA19.3-201ENST00000516165 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNORA19.3-201ENST00000516165 FOXD4L1Q9NU39 408 aa16.01■□□□□ 0.15
SNORA19.3-201ENST00000516165 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
SNORA19.3-201ENST00000516165 CSRNP3Q8WYN3 585 aa15.91■□□□□ 0.14
SNORA19.3-201ENST00000516165 ZBTB22O15209 634 aa15.83■□□□□ 0.12
SNORA19.3-201ENST00000516165 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.12
SNORA19.3-201ENST00000516165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.74■□□□□ 0.11
SNORA19.3-201ENST00000516165 HNRNPUL2Q1KMD3 747 aaKnown RBP15.74■□□□□ 0.11
SNORA19.3-201ENST00000516165 U3KPZ7 1027 aaPredicted RBP15.64■□□□□ 0.09
SNORA19.3-201ENST00000516165 SAMD1Q6SPF0 538 aaPredicted RBP15.62■□□□□ 0.09
SNORA19.3-201ENST00000516165 RNF39Q9H2S5 420 aa15.62■□□□□ 0.09
SNORA19.3-201ENST00000516165 APLP2Q06481 763 aa15.6■□□□□ 0.09
SNORA19.3-201ENST00000516165 ATXN8OSP0DMR3 200 aa15.54■□□□□ 0.08
SNORA19.3-201ENST00000516165 C1QBPQ07021 282 aaKnown RBP15.54■□□□□ 0.08
SNORA19.3-201ENST00000516165 ZNF219Q9P2Y4 722 aaPredicted RBP15.23■□□□□ 0.03
SNORA19.3-201ENST00000516165 CAPN15O75808 1086 aa15.2■□□□□ 0.02
SNORA19.3-201ENST00000516165 CACNB1Q02641 598 aaPredicted RBP15.19■□□□□ 0.02
SNORA19.3-201ENST00000516165 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
SNORA19.3-201ENST00000516165 ATF5Q9Y2D1 282 aaPredicted RBP15.14■□□□□ 0.01
SNORA19.3-201ENST00000516165 TRHP20396 242 aaPredicted RBP15.12■□□□□ 0.01
SNORA19.3-201ENST00000516165 POLA2Q14181 598 aa14.91□□□□□ -0.02
SNORA19.3-201ENST00000516165 DSG3P32926 999 aa14.88□□□□□ -0.03
SNORA19.3-201ENST00000516165 ZBTB12Q9Y330 459 aaPredicted RBP14.84□□□□□ -0.03
SNORA19.3-201ENST00000516165 ABCB7O75027 752 aa14.82□□□□□ -0.04
SNORA19.3-201ENST00000516165 FBLN2P98095 1184 aa14.77□□□□□ -0.05
SNORA19.3-201ENST00000516165 MKRN4PQ13434 485 aaPredicted RBP14.52□□□□□ -0.09
SNORA19.3-201ENST00000516165 FKBP8Q14318 412 aa14.43□□□□□ -0.1
SNORA19.3-201ENST00000516165 SPDYE4A6NLX3 237 aa14.38□□□□□ -0.11
SNORA19.3-201ENST00000516165 SPDYE2BA6NHP3 402 aa14.36□□□□□ -0.11
SNORA19.3-201ENST00000516165 SPDYE6P0CI01 402 aa14.36□□□□□ -0.11
SNORA19.3-201ENST00000516165 SPDYE2Q495Y8 402 aa14.36□□□□□ -0.11
SNORA19.3-201ENST00000516165 RBM42Q9BTD8 480 aaKnown RBP14.35□□□□□ -0.11
SNORA19.3-201ENST00000516165 OSCARQ8IYS5 282 aa14.34□□□□□ -0.11
SNORA19.3-201ENST00000516165 ZNF692Q9BU19 519 aaPredicted RBP14.3□□□□□ -0.12
SNORA19.3-201ENST00000516165 SSUH2Q9Y2M2 353 aa14.18□□□□□ -0.14
SNORA19.3-201ENST00000516165 AKT1S1Q96B36 256 aa14.13□□□□□ -0.15
SNORA19.3-201ENST00000516165 PROM2Q8N271 834 aa14.1□□□□□ -0.15
SNORA19.3-201ENST00000516165 FBXO3Q9UK99 471 aa14.08□□□□□ -0.16
SNORA19.3-201ENST00000516165 PABPN1Q86U42 306 aaKnown RBP eCLIP14.06□□□□□ -0.16
SNORA19.3-201ENST00000516165 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
SNORA19.3-201ENST00000516165 SPDYE1Q8NFV5 336 aaPredicted RBP13.93□□□□□ -0.18
SNORA19.3-201ENST00000516165 REM2Q8IYK8 340 aaPredicted RBP13.91□□□□□ -0.18
SNORA19.3-201ENST00000516165 CLEC11AQ9Y240 323 aa13.79□□□□□ -0.2
SNORA19.3-201ENST00000516165 PLEKHG5O94827 1062 aa13.75□□□□□ -0.21
SNORA19.3-201ENST00000516165 PRR29P0C7W0 189 aa13.74□□□□□ -0.21
SNORA19.3-201ENST00000516165 VASPP50552 380 aaPredicted RBP13.73□□□□□ -0.21
SNORA19.3-201ENST00000516165 PITPNM1O00562 1244 aa13.71□□□□□ -0.21
SNORA19.3-201ENST00000516165 MIER1Q8N108 512 aa13.67□□□□□ -0.22
SNORA19.3-201ENST00000516165 PLCD3Q8N3E9 789 aa13.67□□□□□ -0.22
SNORA19.3-201ENST00000516165 ZBTB47Q9UFB7 747 aaPredicted RBP13.63□□□□□ -0.23
SNORA19.3-201ENST00000516165 CHRDL2Q6WN34 429 aa13.59□□□□□ -0.23
SNORA19.3-201ENST00000516165 KLHL34Q8N239 644 aa13.55□□□□□ -0.24
SNORA19.3-201ENST00000516165 IFNLR1Q8IU57 520 aaPredicted RBP13.49□□□□□ -0.25
SNORA19.3-201ENST00000516165 FXR2P51116 673 aaKnown RBP eCLIP13.48□□□□□ -0.25
SNORA19.3-201ENST00000516165 CREBZFQ9NS37 354 aa13.47□□□□□ -0.25
SNORA19.3-201ENST00000516165 NPM1P06748 294 aaKnown RBP eCLIP13.43□□□□□ -0.26
SNORA19.3-201ENST00000516165 SPOCK2Q92563 424 aa13.43□□□□□ -0.26
SNORA19.3-201ENST00000516165 AMER1Q5JTC6 1135 aaPredicted RBP13.42□□□□□ -0.26
SNORA19.3-201ENST00000516165 PRKAR2AP13861 404 aaKnown RBP13.41□□□□□ -0.26
SNORA19.3-201ENST00000516165 PIP4P2Q8N4L2 257 aa13.39□□□□□ -0.27
SNORA19.3-201ENST00000516165 CHADLQ6NUI6 762 aa13.34□□□□□ -0.27
SNORA19.3-201ENST00000516165 FARP1Q9Y4F1 1045 aaPredicted RBP13.33□□□□□ -0.28
SNORA19.3-201ENST00000516165 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
SNORA19.3-201ENST00000516165 GSE1Q14687 1217 aa13.24□□□□□ -0.29
SNORA19.3-201ENST00000516165 FAM212AQ96EL1 285 aa13.23□□□□□ -0.29
SNORA19.3-201ENST00000516165 NUBP1P53384 320 aa13.21□□□□□ -0.29
SNORA19.3-201ENST00000516165 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
SNORA19.3-201ENST00000516165 TRIM41Q8WV44 630 aa13.19□□□□□ -0.3
SNORA19.3-201ENST00000516165 RTN4Q9NQC3 1192 aaKnown RBP13.19□□□□□ -0.3
SNORA19.3-201ENST00000516165 DCAF8Q5TAQ9 597 aa13.18□□□□□ -0.3
SNORA19.3-201ENST00000516165 CIZ1Q9ULV3 898 aaPredicted RBP13.18□□□□□ -0.3
SNORA19.3-201ENST00000516165 RASEFQ8IZ41 740 aa13.11□□□□□ -0.31
SNORA19.3-201ENST00000516165 PKD2Q13563 968 aa13.06□□□□□ -0.32
SNORA19.3-201ENST00000516165 TSPYL2Q9H2G4 693 aaPredicted RBP13.06□□□□□ -0.32
SNORA19.3-201ENST00000516165 ECM2O94769 699 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms